Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 4.6e-291 1003.8 502 100.0
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 9.3e-284 979.5 502 97.4
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 3.9e-266 921.0 511 90.2
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 1.3e-253 879.4 511 85.9
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 9.5e-212 740.3 503 73.8
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.5e-209 733.0 503 72.6
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 2.0e-209 732.6 469 76.8
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 2.9e-208 728.8 510 72.4
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 9.2e-207 723.8 469 76.5
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.2e-206 723.4 505 70.9
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 2.3e-205 719.2 503 71.4
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 5.0e-205 718.0 511 69.9
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 1.5e-204 716.5 511 68.9
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 5.6e-204 714.5 505 70.5
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 2.8e-203 712.2 513 68.8
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.4e-202 709.9 511 68.3
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 2.3e-202 709.1 503 71.0
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.5e-201 706.4 497 71.2
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 2.0e-201 706.1 514 68.5
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 2.6e-201 705.7 500 69.4
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 4.4e-201 704.9 513 68.8
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 9.9e-201 703.7 453 75.7
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 1.3e-200 703.4 509 69.9
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 2.2e-200 702.6 538 67.8
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 8.3e-200 700.7 505 69.5
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.1e-199 700.3 513 70.2
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 1.9e-199 699.5 515 68.0
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 2.4e-199 699.1 512 68.9
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 2.4e-199 699.1 517 68.3
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 5.4e-199 698.0 495 70.1
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 9.2e-199 697.2 505 68.9
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 9.2e-199 697.2 461 74.2
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 9.2e-199 697.2 510 68.0
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.6e-198 696.4 475 72.2
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 7.8e-198 694.1 475 72.0
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 7.8e-198 694.1 514 68.5
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.0e-197 693.7 505 68.7
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 6.6e-197 691.0 513 67.3
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.5e-196 687.2 475 71.6
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.5e-196 687.2 475 71.2
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 2.1e-195 686.0 512 66.4
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 2.8e-195 685.6 511 67.7
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 3.6e-195 685.3 512 66.8
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 4.7e-195 684.9 512 66.8
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 1.5e-193 679.9 514 66.5
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 5.8e-193 677.9 516 66.5
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.3e-192 676.8 515 68.0
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 1.3e-192 676.8 510 66.9
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.9e-192 674.9 511 65.6
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.1e-191 673.7 499 68.1
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 2.4e-191 672.5 507 66.7
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 5.4e-191 671.4 449 73.3
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 7.1e-191 671.0 481 69.9
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 3.3e-188 662.1 457 71.6
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 4.0e-186 655.2 452 69.7
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.7e-181 639.8 480 64.8
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 6.6e-181 637.9 451 69.8
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 4.3e-180 635.2 454 69.2
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 5.6e-180 634.8 510 62.7
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 9.6e-180 634.0 493 63.5
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 1.3e-179 633.6 493 63.5
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 4.8e-179 631.7 493 63.9
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.0e-177 626.3 448 67.4
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 5.8e-177 624.8 422 71.3
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 7.6e-177 624.4 506 62.1
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 4.9e-176 621.7 506 61.9
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 3.2e-175 619.0 451 67.8
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 5.4e-175 618.2 506 61.5
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 3.0e-173 612.5 513 61.2
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 3.9e-173 612.1 446 67.5
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 2.5e-172 609.4 502 62.4
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 3.3e-172 609.0 515 60.4
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 4.3e-172 608.6 443 67.7
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.3e-171 607.1 439 66.7
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 1.3e-171 607.1 485 64.1
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.3e-171 607.1 510 60.2
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 1.3e-171 607.1 502 61.4
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 2.8e-171 605.9 515 61.2
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 1.8e-170 603.2 459 65.6
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 3.1e-170 602.4 503 62.2
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.5e-169 600.1 503 62.2
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 9.9e-169 597.4 413 70.0
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 4.9e-168 595.1 511 59.5
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 1.4e-167 593.6 512 60.0
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 5.5e-167 591.7 442 65.4
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 2.3e-165 586.3 511 59.7
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 3.9e-165 585.5 511 59.5
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 3.9e-165 585.5 515 58.8
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 1.1e-164 583.9 513 58.9
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 2.8e-163 579.3 506 56.9
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 6.9e-162 574.7 492 60.0
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 4.9e-160 568.5 501 59.3
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 2.9e-152 542.7 380 70.8
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 4.3e-148 528.9 397 66.0
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 1.1e-140 504.2 353 67.4
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 1.7e-139 500.4 426 58.7
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 1.6e-134 483.8 429 55.9
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 1.3e-131 474.2 459 53.2
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 6.5e-128 461.8 448 57.8
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 3.1e-122 443.0 291 73.2
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 3.8e-112 409.5 342 59.4
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 1.1e-106 391.3 423 45.9
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 3.1e-101 373.2 257 70.8
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.8e-94 350.1 422 48.1
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.1e-89 334.0 259 64.9
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 8.6e-88 328.6 446 40.8
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.1e-79 301.6 229 67.7
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 6.9e-69 265.8 425 37.2
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 2.9e-67 260.4 150 81.3
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.1e-63 248.4 422 34.8
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 6.2e-62 242.7 134 85.8
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 1.2e-44 185.3 171 55.6
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.0e-35 155.6 228 43.9
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 1.9e-34 151.4 191 43.5
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 7.2e-34 149.4 126 60.3
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 2.1e-33 147.9 228 41.7
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 1.8e-32 144.8 125 60.0
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 3.1e-29 134.0 141 51.1
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 2.0e-15 88.2 103 48.5


User provided reference genes

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