Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 0.0e+00 1637.5 842 100.0
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 0.0e+00 1286.9 845 79.5
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 0.0e+00 1260.0 799 81.9
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 0.0e+00 1183.7 852 74.6
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 2.8e-285 985.3 810 66.8
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 2.3e-282 975.7 809 64.9
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.0e-278 962.6 820 66.6
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 1.3e-277 959.9 848 62.4
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.3e-277 959.9 848 62.4
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 7.0e-276 954.1 824 63.6
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 9.2e-276 953.7 809 65.1
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 9.5e-273 943.7 850 62.7
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 1.2e-272 943.3 824 62.0
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 8.0e-272 940.6 801 63.0
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 8.9e-271 937.2 805 63.7
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 8.9e-271 937.2 808 64.2
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 1.5e-270 936.4 822 63.7
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 2.6e-270 935.6 808 61.3
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 7.5e-270 934.1 801 60.9
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 3.7e-269 931.8 810 63.6
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 6.4e-269 931.0 859 59.8
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.4e-268 929.1 832 61.4
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 5.4e-268 927.9 747 66.4
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 6.0e-267 924.5 788 64.3
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 7.8e-267 924.1 713 65.4
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 5.2e-263 911.4 801 61.7
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 8.9e-263 910.6 741 66.8
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 4.6e-259 898.3 702 67.4
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 6.0e-259 897.9 813 61.9
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 1.7e-258 896.3 728 62.5
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 2.1e-256 889.4 788 62.2
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 3.6e-256 888.6 803 58.4
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 1.8e-255 886.3 715 66.6
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 4.0e-255 885.2 728 63.3
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 4.0e-255 885.2 683 67.2
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 5.8e-254 881.3 537 74.7
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 8.4e-253 877.5 701 65.2
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 1.1e-252 877.1 766 62.3
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 4.1e-252 875.2 764 61.5
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 2.3e-250 869.4 770 60.0
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.9e-249 866.3 789 59.9
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 3.3e-249 865.5 724 63.8
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 5.6e-249 864.8 800 57.1
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 7.3e-249 864.4 724 63.5
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 1.2e-248 863.6 812 58.9
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 4.7e-248 861.7 745 62.7
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 1.1e-247 860.5 745 62.4
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 1.8e-247 859.8 544 71.9
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 5.2e-247 858.2 723 63.5
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 7.6e-246 854.4 782 60.2
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 9.9e-246 854.0 780 62.7
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 9.9e-246 854.0 753 62.3
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 2.9e-245 852.4 800 58.8
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 2.9e-245 852.4 733 63.0
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 3.8e-245 852.0 686 64.6
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 7.1e-244 847.8 811 57.0
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 1.6e-243 846.7 782 60.5
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 1.7e-242 843.2 571 68.3
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 3.9e-242 842.0 803 57.3
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 6.6e-242 841.3 580 67.4
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 3.3e-241 839.0 740 63.4
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 1.3e-240 837.0 702 66.2
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 2.6e-238 829.3 721 63.5
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 2.9e-237 825.9 799 59.7
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 3.8e-237 825.5 763 61.1
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 4.2e-236 822.0 800 57.5
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 5.4e-236 821.6 742 64.2
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 1.2e-235 820.5 760 56.8
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 6.0e-235 818.1 540 69.8
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 6.6e-234 814.7 777 59.7
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.1e-233 813.9 896 54.5
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 2.1e-232 809.7 663 64.9
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 9.9e-230 800.8 696 62.8
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 2.2e-229 799.7 547 68.0
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 3.2e-228 795.8 740 60.3
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 1.2e-227 793.9 745 58.1
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 2.1e-227 793.1 778 56.7
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 2.3e-226 789.6 813 57.8
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 1.8e-223 780.0 707 60.4
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 5.8e-222 775.0 714 57.8
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 1.1e-220 770.8 511 69.3
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 2.1e-219 766.5 852 54.0
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 6.7e-218 761.5 728 58.9
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 1.1e-215 754.2 742 57.5
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 1.4e-215 753.8 720 59.0
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 3.7e-208 729.2 834 53.6
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 2.1e-195 686.8 617 63.0
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 1.3e-165 587.8 578 55.4
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 5.9e-158 562.4 337 74.2
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 3.9e-157 559.7 494 56.1
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 3.1e-154 550.1 407 65.8
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 5.2e-154 549.3 501 52.9
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.0e-149 535.0 592 57.1
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 3.6e-147 526.6 725 45.9
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 4.3e-140 503.1 464 60.8
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 5.6e-140 502.7 390 60.8
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 8.9e-130 468.8 402 64.4
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 3.8e-128 463.4 264 77.3
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 2.2e-112 411.0 346 56.1
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 9.3e-103 379.0 363 52.6
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 3.9e-93 347.1 188 80.3
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 3.9e-85 320.5 406 53.2
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 6.3e-83 313.2 345 48.1
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 1.3e-80 305.4 523 45.5
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 1.4e-77 295.4 196 69.9
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 4.4e-68 263.8 182 65.9
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 3.5e-49 201.1 256 61.3
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.9e-34 152.1 117 59.8
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.9e-31 142.1 83 74.7
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-30 139.4 475 26.7
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.4e-18 99.4 177 37.3
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 9.2e-18 96.7 77 58.4
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 2.5e-15 88.6 72 51.4
Potri.004G188432 Populus trichocarpa HOM05D007000 ORTHO05D030830 1.6e-06 59.3 100 42.0


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