Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G014220 Cucumis sativus L. HOM05D004760 ORTHO05D006114 1.3e-51 206.1 105 100.0
ClCG02G021440 Citrullus lanatus HOM05D004760 ORTHO05D006114 3.8e-38 161.4 129 70.5
MELO3C033128.2 Cucumis melo HOM05D004760 ORTHO05D006114 1.0e-35 153.3 127 66.9
CsaV3_4G002110 Cucumis sativus L. HOM05D004760 ORTHO05D006114 3.0e-35 151.8 127 66.1
Gohir.A03G030600 Gossypium hirsutum HOM05D004760 ORTHO05D006114 2.0e-34 149.1 126 63.5
COL.COLO4_03696 Corchorus olitorius HOM05D004760 ORTHO05D006114 3.3e-34 148.3 124 64.5
Atru.chr10.822 Acer truncatum HOM05D004760 ORTHO05D006114 4.4e-34 147.9 126 65.1
Duzib150G1663 Durio zibethinus HOM05D004760 ORTHO05D006114 5.7e-34 147.5 126 63.5
Thecc.09G348500 Theobroma cacao HOM05D004760 ORTHO05D006114 7.4e-34 147.1 126 61.9
Atru.chr10.811 Acer truncatum HOM05D004760 ORTHO05D006114 1.3e-33 146.4 126 64.3
QL01p015831 Quercus lobata HOM05D004760 ORTHO05D006114 1.7e-33 146.0 126 65.1
Ciclev10002842m.g Citrus clementina HOM05D004760 ORTHO05D006114 2.2e-33 145.6 123 65.9
Gohir.D03G137800 Gossypium hirsutum HOM05D004760 ORTHO05D006114 2.8e-33 145.2 126 61.9
Gorai.003G144700 Gossypium raimondii HOM05D004760 ORTHO05D006114 2.8e-33 145.2 126 61.9
CANSAT80G1575 Cannabis sativa HOM05D004760 ORTHO05D006114 6.3e-33 144.1 120 63.3
Cpa.g.sc94.2 Carica papaya HOM05D004760 ORTHO05D006114 6.3e-33 144.1 120 65.0
Dinv29358 Davidia involucrata HOM05D004760 ORTHO05D006114 6.3e-33 144.1 126 61.9
TAR636G2244 Trochodendron aralioides HOM05D004760 ORTHO05D006114 8.2e-33 143.7 118 66.9
Prupe.6G108700 Prunus persica HOM05D004760 ORTHO05D006114 1.1e-32 143.3 126 62.7
TWI79G1159 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 1.1e-32 143.3 121 64.5
Manes.15G173300 Manihot esculenta HOM05D004760 ORTHO05D006114 1.4e-32 142.9 124 64.5
vmacro14407 Vaccinium macrocarpon HOM05D004760 ORTHO05D006114 1.8e-32 142.5 120 65.0
GSVIVG01031504001 Vitis vinifera HOM05D004760 ORTHO05D006114 1.8e-32 142.5 125 62.4
CAN.G546.10 Capsicum annuum HOM05D004760 ORTHO05D006114 2.4e-32 142.1 126 61.1
Sed0008060 Sechium edule HOM05D004760 ORTHO05D006114 2.4e-32 142.1 126 62.7
CiPaw.14G087800 Carya illinoinensis HOM05D004760 ORTHO05D006114 5.3e-32 141.0 120 63.3
Rhsim01G0212000 Rhododendron simsii HOM05D004760 ORTHO05D006114 5.3e-32 141.0 118 65.3
Eucgr.C00623 Eucalyptus grandis HOM05D004760 ORTHO05D006114 9.1e-32 140.2 126 62.7
Cfa010341 Carpinus fangiana HOM05D004760 ORTHO05D006114 1.2e-31 139.8 120 63.3
Oeu014013.2 Olea europaea HOM05D004760 ORTHO05D006114 1.6e-31 139.4 123 61.8
MSTRG.22442 Avicennia marina HOM05D004760 ORTHO05D006114 2.6e-31 138.7 121 59.5
Haze_23747 Corylus avellana HOM05D004760 ORTHO05D006114 3.5e-31 138.3 120 62.5
FAN11G0015 Fragaria x ananassa HOM05D004760 ORTHO05D006114 3.5e-31 138.3 118 61.9
Manes.04G015300 Manihot esculenta HOM05D004760 ORTHO05D006114 3.5e-31 138.3 123 63.4
Aqoxy1G01159 Aquilegia oxysepala HOM05D004760 ORTHO05D006114 4.5e-31 137.9 118 62.7
FAN21G0726 Fragaria x ananassa HOM05D004760 ORTHO05D006114 5.9e-31 137.5 124 58.9
Sopen11g027800 Solanum pennellii HOM05D004760 ORTHO05D006114 5.9e-31 137.5 124 60.5
TWI31G0427 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 5.9e-31 137.5 125 60.0
FAN25G2761 Fragaria x ananassa HOM05D004760 ORTHO05D006114 7.7e-31 137.1 123 59.3
MD00G1033500 Malus domestica HOM05D004760 ORTHO05D006114 7.7e-31 137.1 127 60.6
PGSC0003DMG400008071 Solanum tuberosum HOM05D004760 ORTHO05D006114 7.7e-31 137.1 124 59.7
Potri.004G214400 Populus trichocarpa HOM05D004760 ORTHO05D006114 1.7e-30 136.0 124 62.1
PGSC0003DMG400008072 Solanum tuberosum HOM05D004760 ORTHO05D006114 1.7e-30 136.0 124 59.7
PGSC0003DMG400008118 Solanum tuberosum HOM05D004760 ORTHO05D006114 2.9e-30 135.2 124 58.9
CSS0038756 Camellia sinensis var. sinensis HOM05D004760 ORTHO05D006114 3.8e-30 134.8 118 62.7
Lsat_1_v5_gn_2_99521 Lactuca sativa HOM05D004760 ORTHO05D006114 3.8e-30 134.8 125 60.0
PGSC0003DMG400005521 Solanum tuberosum HOM05D004760 ORTHO05D006114 6.5e-30 134.0 124 58.9
Sp5g16240 Schrenkiella parvula HOM05D004760 ORTHO05D006114 8.5e-30 133.7 124 58.1
THA.LOC104810873 Tarenaya hassleriana HOM05D004760 ORTHO05D006114 8.5e-30 133.7 118 59.3
Lj1C207G1 Lonicera japonica HOM05D000681 ORTHO05D003832 1.5e-29 132.9 126 61.1
ECA233G3649 Erigeron canadensis HOM05D004760 ORTHO05D006114 1.9e-29 132.5 120 60.8
Thhalv10002715m.g Eutrema salsugineum HOM05D004760 ORTHO05D006114 2.5e-29 132.1 121 58.7
Oeu013537.1 Olea europaea HOM05D004760 ORTHO05D006114 2.5e-29 132.1 123 59.3
BcaC01g02002 Brassica carinata HOM05D004760 ORTHO05D006114 3.2e-29 131.7 117 59.8
C03p69650 Brassica napus HOM05D004760 ORTHO05D006114 3.2e-29 131.7 117 59.8
BolC3t19223H Brassica oleracea HOM05D004760 ORTHO05D006114 3.2e-29 131.7 117 59.8
SalBow3G2862 Salvia bowleyana HOM05D004760 ORTHO05D006114 3.2e-29 131.7 117 61.5
A06p21630 Brassica napus HOM05D004760 ORTHO05D006114 4.2e-29 131.3 117 59.0
BraA06t25253Z Brassica rapa HOM05D004760 ORTHO05D006114 4.2e-29 131.3 117 59.0
Migut.D02262 Erythranthe guttata HOM05D004760 ORTHO05D006114 4.2e-29 131.3 128 56.2
Eucgr.B02540 Eucalyptus grandis HOM05D004760 ORTHO05D006114 4.2e-29 131.3 110 65.5
AT3G45020 Arabidopsis thaliana HOM05D004760 ORTHO05D006114 5.5e-29 131.0 116 60.3
DCAR_013702 Daucus carota HOM05D004760 ORTHO05D006114 5.5e-29 131.0 125 60.0
Lj3g0014185 Lotus japonicus HOM05D004760 ORTHO05D006114 7.2e-29 130.6 123 56.9
AUR62034436 Chenopodium quinoa HOM05D004760 ORTHO05D006114 9.4e-29 130.2 119 57.1
Cc01_g10530 Coffea canephora HOM05D004760 ORTHO05D006114 9.4e-29 130.2 126 55.6
AL5G23480 Arabidopsis lyrata HOM05D004760 ORTHO05D006114 1.2e-28 129.8 116 60.3
C01p34030 Brassica napus HOM05D004760 ORTHO05D006114 1.2e-28 129.8 122 56.6
BolC1t03372H Brassica oleracea HOM05D004760 ORTHO05D006114 1.2e-28 129.8 122 56.6
Lalb_Chr01g0004501 Lupinus albus HOM05D004760 ORTHO05D006114 1.2e-28 129.8 127 57.5
Aa31LG4G14120 Aethionema arabicum HOM05D004760 ORTHO05D006114 2.1e-28 129.0 120 55.8
BcaB01g01128 Brassica carinata HOM05D004760 ORTHO05D006114 2.1e-28 129.0 117 59.0
CARHR150950 Cardamine hirsuta HOM05D004760 ORTHO05D006114 2.1e-28 129.0 118 57.6
Nitab4.5_0002033g0060 Nicotiana tabacum HOM05D004760 ORTHO05D006114 2.1e-28 129.0 126 57.1
Glyma.03G099400 Glycine max HOM05D004760 ORTHO05D006114 2.7e-28 128.6 129 55.0
RcHm_v2.0_Chr4g0444611 Rosa chinensis HOM05D004760 ORTHO05D006114 2.7e-28 128.6 123 57.7
PGR083G1146 Punica granatum HOM05D004760 ORTHO05D006114 3.6e-28 128.3 123 58.5
PGSC0003DMG400035806 Solanum tuberosum HOM05D004760 ORTHO05D006114 3.6e-28 128.3 127 56.7
Carub.0005s1081 Capsella rubella HOM05D004760 ORTHO05D006114 4.7e-28 127.9 114 60.5
AUR62014927 Chenopodium quinoa HOM05D004760 ORTHO05D006114 6.1e-28 127.5 118 56.8
VMungo0331G0086 Vigna mungo HOM05D004760 ORTHO05D006114 6.1e-28 127.5 121 57.0
Sabra04G0145500 Salix brachista HOM05D004760 ORTHO05D006114 8.0e-28 127.1 109 64.2
BcaC09g49679 Brassica carinata HOM05D004760 ORTHO05D006114 2.3e-27 125.6 122 54.9
Hund01473 Selenicereus undatus HOM05D004760 ORTHO05D006114 3.0e-27 125.2 123 52.8
SHI30132 Sapria himalayana HOM05D004760 ORTHO05D006114 4.0e-27 124.8 117 58.1
FAN16G0053 Fragaria x ananassa HOM05D004760 ORTHO05D006114 5.2e-27 124.4 126 54.8
BcaB05g23055 Brassica carinata HOM05D004760 ORTHO05D006114 6.7e-27 124.0 113 59.3
arahy.Tifrunner.gnm1.ann1.HQ4852 Arachis hypogaea HOM05D004760 ORTHO05D006114 8.8e-27 123.6 123 56.1
arahy.Tifrunner.gnm1.ann1.TWBW4W Arachis hypogaea HOM05D004760 ORTHO05D006114 8.8e-27 123.6 123 56.1
Actinidia07172 Actinidia chinensis HOM05D004760 ORTHO05D006114 1.1e-26 123.2 105 61.0
Rhsim13G0099000 Rhododendron simsii HOM05D004760 ORTHO05D006114 1.5e-26 122.9 111 61.3
unitig_21.g20191 Utricularia gibba HOM05D001235 ORTHO05D005684 2.0e-26 122.5 121 51.2
arahy.Tifrunner.gnm1.ann1.KI0H1T Arachis hypogaea HOM05D004760 ORTHO05D006114 2.6e-26 122.1 123 55.3
Psat3g094560 Pisum sativum HOM05D004760 ORTHO05D006114 2.6e-26 122.1 121 53.7
TPR.G21885 Trifolium pratense HOM05D004760 ORTHO05D006114 2.6e-26 122.1 117 54.7
Sc06g0010990 Simmondsia chinensis HOM05D004760 ORTHO05D006114 3.3e-26 121.7 120 53.3
Sc06g0010910 Simmondsia chinensis HOM05D004760 ORTHO05D006114 4.4e-26 121.3 120 53.3
SGA_v2.0_scaffold263G45970 Striga asiatica HOM05D004760 ORTHO05D006114 5.7e-26 120.9 117 54.7
Ca_08122_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 7.5e-26 120.6 117 55.6
Ah.15g090630 Amaranthus hybridus HOM05D004760 ORTHO05D006114 9.7e-26 120.2 121 52.9
HanXRQChr14g0432111 Helianthus annuus HOM05D004760 ORTHO05D006114 9.7e-26 120.2 108 60.2
Medtr1g080050 Medicago truncatula HOM05D004760 ORTHO05D006114 2.2e-25 119.0 106 60.4
Medtr7g083650 Medicago truncatula HOM05D004760 ORTHO05D006114 2.2e-25 119.0 120 55.0
arahy.Tifrunner.gnm1.ann1.DTBR3Z Arachis hypogaea HOM05D004760 ORTHO05D006114 2.4e-24 115.5 123 52.8
Nn7g38254 Nelumbo nucifera HOM05D004760 ORTHO05D006114 1.6e-23 112.8 98 64.3
Haze_20543 Corylus avellana HOM05D004760 ORTHO05D006114 3.5e-23 111.7 118 49.2
MBI18_g16202_MAGBIO Magnolia biondii HOM05D004760 ORTHO05D006114 4.5e-23 111.3 119 51.3
PGR102G1962 Punica granatum HOM05D004760 ORTHO05D006114 7.7e-23 110.5 122 52.5
RcHm_v2.0_Chr5g0057731 Rosa chinensis HOM05D004760 ORTHO05D006114 2.9e-22 108.6 98 59.2
EL10Ac9g22581 Beta vulgaris HOM05D004760 ORTHO05D006114 5.0e-22 107.8 104 53.8
FvH4_3g31090 Fragaria vesca HOM05D004760 ORTHO05D006114 5.0e-22 107.8 98 59.2
Nitab4.5_0002186g0070 Nicotiana tabacum HOM05D004760 ORTHO05D006114 5.0e-22 107.8 98 61.2
ECA240G4818 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.1e-21 106.7 99 60.6
CDE02G4002 Ceratophyllum demersum HOM05D004760 ORTHO05D006114 4.2e-21 104.8 116 49.1
CDE09G0496 Ceratophyllum demersum HOM05D004760 ORTHO05D001676 4.2e-21 104.8 116 49.1
ECA238G2603 Erigeron canadensis HOM05D004760 ORTHO05D006114 4.2e-21 104.8 106 54.7
HPP92_025344 Vanilla planifolia HOM05D004760 ORTHO05D006114 7.2e-21 104.0 119 47.9
Dinv37316 Davidia involucrata HOM05D004760 ORTHO05D006114 1.6e-20 102.8 95 58.9
A01p26650 Brassica napus HOM05D004760 ORTHO05D006114 2.1e-20 102.4 98 56.1
BraA01t02596Z Brassica rapa HOM05D004760 ORTHO05D006114 2.1e-20 102.4 98 56.1
Os09g0549700 Oryza sativa ssp. japonica HOM05D004760 ORTHO05D006114 4.7e-20 101.3 117 47.9
Actinidia13489 Actinidia chinensis HOM05D004760 ORTHO05D006114 1.0e-19 100.1 88 56.8
arahy.Tifrunner.gnm1.ann1.0NB9P2 Arachis hypogaea HOM05D004760 ORTHO05D006114 8.8e-19 97.1 117 49.6
PSO801G0746 Papaver somniferum HOM05D004760 ORTHO05D006114 2.0e-18 95.9 126 42.1
Zm00001eb320920 Zea mays HOM05D004760 ORTHO05D006114 2.6e-18 95.5 117 46.2
PSO339G3989 Papaver somniferum HOM05D004760 ORTHO05D006114 7.5e-18 94.0 117 44.4
Lalb_Chr02g0155851 Lupinus albus HOM05D004760 ORTHO05D006114 8.3e-17 90.5 113 42.5
Actinidia14009 Actinidia chinensis HOM05D004760 ORTHO05D006114 1.2e-15 86.7 86 54.7
arahy.Tifrunner.gnm1.ann1.JVX2H3 Arachis hypogaea HOM05D004760 ORTHO05D002586 1.6e-15 86.3 102 48.0
ATR0152G025 Amborella trichopoda HOM05D004760 ORTHO05D006114 5.9e-15 84.3 104 45.2
arahy.Tifrunner.gnm1.ann1.PKX4UH Arachis hypogaea HOM05D004760 ORTHO05D006114 1.3e-14 83.2 93 50.5
DCAR_008992 Daucus carota HOM05D004760 ORTHO05D006114 1.3e-14 83.2 114 40.4
Ca_06514_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 2.9e-14 82.0 95 48.4
Glyma.10G055400 Glycine max HOM05D004760 ORTHO05D006114 1.5e-13 79.7 122 39.3
VMungo0720G1193 Vigna mungo HOM05D004760 ORTHO05D006114 1.5e-13 79.7 106 40.6
Lj5g0000803 Lotus japonicus HOM05D004760 ORTHO05D006114 4.2e-13 78.2 111 42.3
Medtr1g063230 Medicago truncatula HOM05D004760 ORTHO05D006114 4.2e-13 78.2 113 38.1
QL11p023169 Quercus lobata HOM05D004760 ORTHO05D006114 4.2e-13 78.2 50 72.0
TPR.G11257 Trifolium pratense HOM05D004760 ORTHO05D006114 4.2e-13 78.2 113 38.1
Hund12449 Selenicereus undatus HOM05D004760 ORTHO05D006114 5.5e-13 77.8 86 46.5
Psat6g074200 Pisum sativum HOM05D004760 ORTHO05D006114 7.2e-13 77.4 113 38.1
SEGI_39147 Sequoiadendron giganteum HOM05D004760 ORTHO05D006114 9.5e-13 77.0 114 40.4
Peaxi162Scf00351g00053 Petunia axillaris HOM05D004760 ORTHO05D006114 1.2e-12 76.6 51 68.6
Phvul.007G219200 Phaseolus vulgaris HOM05D004760 ORTHO05D006114 2.1e-12 75.9 106 39.6
Solyc11g069080.3 Solanum lycopersicum HOM05D004760 ORTHO05D006114 2.1e-12 75.9 51 68.6
Sc20g0005490 Simmondsia chinensis HOM05D004760 ORTHO05D006114 3.6e-12 75.1 116 40.5
ECA233G6109 Erigeron canadensis HOM05D000473 ORTHO05D001219 4.7e-12 74.7 49 75.5
EL10Ac7g16630 Beta vulgaris HOM05D004760 ORTHO05D039006 6.1e-12 74.3 131 32.8
SHI02979 Sapria himalayana HOM05D004760 ORTHO05D006114 1.0e-11 73.6 88 44.3
Ca_11503_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 5.2e-11 71.2 111 39.6
arahy.Tifrunner.gnm1.ann1.P1K6TB Arachis hypogaea HOM05D004760 ORTHO05D006114 6.8e-11 70.9 85 48.2
MELO3C026909.2 Cucumis melo HOM05D004760 ORTHO05D006114 6.8e-11 70.9 49 79.6
arahy.Tifrunner.gnm1.ann1.B7429M Arachis hypogaea HOM05D004760 ORTHO05D000042 8.8e-11 70.5 88 46.6
AUR62040351 Chenopodium quinoa HOM05D004760 ORTHO05D039006 8.8e-11 70.5 126 32.5


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