Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G013130 Cucumis sativus L. HOM05D007641 ORTHO05D007630 0.0e+00 1478.8 738 100.0
MELO3C019578.2 Cucumis melo HOM05D007641 ORTHO05D007630 0.0e+00 1182.5 796 79.1
ClCG02G019020 Citrullus lanatus HOM05D007641 ORTHO05D007630 4.4e-282 974.5 776 69.5
Sed0007856 Sechium edule HOM05D007641 ORTHO05D007630 5.6e-237 824.7 812 60.3
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 5.2e-57 226.9 844 30.6
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 8.9e-57 226.1 845 30.3
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 8.0e-50 203.0 779 30.4
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 3.7e-47 194.1 828 29.1
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 7.0e-46 189.9 849 29.3
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 4.6e-45 187.2 875 29.0
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 6.0e-45 186.8 797 29.1
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 1.7e-44 185.3 847 28.8
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 9.5e-43 179.5 834 27.9
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 1.4e-41 175.6 808 29.1
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 8.9e-41 172.9 775 29.3
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 9.8e-40 169.5 820 27.1
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 3.7e-39 167.5 704 29.7
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 6.4e-39 166.8 781 28.7
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 1.4e-38 165.6 856 27.7
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 2.4e-38 164.9 662 29.6
TWI79G1607 Tripterygium wilfordii HOM05D007641 ORTHO05D007630 1.5e-35 155.6 718 27.6
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 3.4e-32 144.4 834 25.7
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 1.7e-31 142.1 700 29.3
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 4.1e-30 137.5 584 28.6
Cpa.g.sc2.293 Carica papaya HOM05D007641 ORTHO05D007630 2.1e-29 135.2 347 35.7
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 6.2e-26 123.6 840 27.4
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 6.2e-26 123.6 853 26.3
Ciclev10004023m.g Citrus clementina HOM05D007641 ORTHO05D007630 3.1e-25 121.3 298 34.2
Aqoxy1G01263 Aquilegia oxysepala HOM05D007641 ORTHO05D007630 1.2e-24 119.4 674 26.9
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 3.4e-24 117.9 430 30.5
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 2.2e-23 115.2 828 27.2
GSVIVG01024555001 Vitis vinifera HOM05D007641 ORTHO05D007630 1.9e-22 112.1 227 37.9
Sp4g13010 Schrenkiella parvula HOM05D001940 ORTHO05D007630 2.4e-22 111.7 547 27.6
Solyc09g005140.2 Solanum lycopersicum HOM05D014625 ORTHO05D007630 2.1e-21 108.6 270 34.4
Sopen09g001120 Solanum pennellii HOM05D014625 ORTHO05D007630 3.5e-21 107.8 269 33.8
PSO170G4823 Papaver somniferum HOM05D007641 ORTHO05D007630 4.6e-21 107.5 294 33.3
C04p20070 Brassica napus HOM05D001940 ORTHO05D007630 3.0e-20 104.8 386 29.0
TAR636G3352 Trochodendron aralioides HOM05D007641 ORTHO05D007630 3.0e-20 104.8 326 32.5
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 6.6e-20 103.6 583 25.9
BolC4t23545H Brassica oleracea HOM05D001940 ORTHO05D007630 8.7e-20 103.2 371 29.1
BcaC02g11137 Brassica carinata HOM05D001940 ORTHO05D007630 1.1e-19 102.8 341 30.5
Carub.0004s1164 Capsella rubella HOM05D001940 ORTHO05D007630 1.5e-19 102.4 546 25.6
A05p14980 Brassica napus HOM05D001940 ORTHO05D007630 4.3e-19 100.9 501 27.1
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 9.6e-19 99.8 585 24.6
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 3.6e-18 97.8 575 25.4
BraA05t20424Z Brassica rapa HOM05D001940 ORTHO05D007630 1.1e-17 96.3 306 30.7
AL4G25360 Arabidopsis lyrata HOM05D001940 ORTHO05D007630 1.4e-17 95.9 543 25.6
AUR62001158 Chenopodium quinoa HOM05D029401 ORTHO05D007630 2.4e-17 95.1 231 32.5
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 3.1e-17 94.7 832 25.6
BcaB02g10326 Brassica carinata HOM05D001940 ORTHO05D007630 5.3e-17 94.0 266 33.1
Hund18459 Selenicereus undatus HOM05D029401 ORTHO05D007630 6.9e-17 93.6 517 26.9
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 9.0e-17 93.2 761 25.2
THA.LOC104815825 Tarenaya hassleriana HOM05D001940 ORTHO05D007630 1.2e-16 92.8 267 32.2
HanXRQChr08g0230341 Helianthus annuus HOM05D007641 ORTHO05D007630 7.6e-16 90.1 484 26.7
Lsat_1_v5_gn_9_13760 Lactuca sativa HOM05D007641 ORTHO05D007630 9.9e-16 89.7 306 30.4
AT2G30480 Arabidopsis thaliana HOM05D001940 ORTHO05D007630 1.7e-15 89.0 538 24.2
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 1.7e-15 89.0 820 25.2
PSO017G1347 Papaver somniferum HOM05D007641 ORTHO05D007630 8.4e-15 86.7 235 33.2
Os01g0167700 Oryza sativa ssp. japonica HOM05D052079 ORTHO05D007630 1.9e-14 85.5 471 27.2
Sc23g0005090 Simmondsia chinensis HOM05D007641 ORTHO05D007630 1.9e-14 85.5 745 23.4
Ah.08g218910 Amaranthus hybridus HOM05D000020 ORTHO05D002192 4.2e-14 84.3 259 32.8
SGA_v2.0_scaffold20G09288 Striga asiatica HOM05D007641 ORTHO05D007630 4.2e-14 84.3 261 33.0
Thhalv10017756m.g Eutrema salsugineum HOM05D001940 ORTHO05D007630 5.4e-14 84.0 413 27.8
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 7.1e-14 83.6 289 31.5
Ca_15061_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 2.1e-13 82.0 317 33.1
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 4.6e-13 80.9 763 25.3
Ciclev10001550m.g Citrus clementina HOM05D007641 ORTHO05D007630 2.3e-12 78.6 324 30.9
Migut.D00817 Erythranthe guttata HOM05D007641 ORTHO05D007630 2.3e-12 78.6 265 29.4
ECA247G3209 Erigeron canadensis HOM05D007641 ORTHO05D007630 5.1e-12 77.4 390 23.1
Nitab4.5_0001868g0030 Nicotiana tabacum HOM05D014625 ORTHO05D007630 6.6e-12 77.0 208 31.7
HPP92_015425 Vanilla planifolia HOM05D007641 ORTHO05D007630 6.6e-12 77.0 833 24.0
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 3.3e-11 74.7 824 23.4
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 4.3e-11 74.3 819 24.1
DCAR_018642 Daucus carota HOM05D007641 ORTHO05D007630 2.1e-10 72.0 620 26.5
PGR102G3245 Punica granatum HOM05D007641 ORTHO05D007630 4.8e-10 70.9 185 32.4
AUR62016518 Chenopodium quinoa HOM05D029401 ORTHO05D007630 8.1e-10 70.1 85 41.2
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 1.4e-09 69.3 699 25.5
ATR1127G234 Amborella trichopoda HOM05D007641 ORTHO05D007630 1.8e-09 68.9 245 29.4
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 4.0e-09 67.8 680 23.8
Peaxi162Scf00605g00515 Petunia axillaris HOM05D014625 ORTHO05D007630 5.3e-09 67.4 204 33.3
CARHR123930 Cardamine hirsuta HOM05D001940 ORTHO05D007630 2.0e-08 65.5 140 35.7
Oeu064683.1 Olea europaea HOM05D007641 ORTHO05D007630 2.9e-07 61.6 131 42.0
Gorai.002G184200 Gossypium raimondii HOM05D007641 ORTHO05D007630 3.8e-07 61.2 139 35.3
PSO384G0550 Papaver somniferum HOM05D007641 ORTHO05D007630 4.9e-07 60.8 62 46.8
CSS0002773 Camellia sinensis var. sinensis HOM05D024992 ORTHO05D022110 2.4e-06 58.5 100 43.0
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 2.4e-06 58.5 220 29.1
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 2.4e-06 58.5 220 29.1


User provided reference genes

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