Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 1.6e-126 456.1 224 100.0
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 2.0e-97 359.4 190 92.6
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 8.9e-85 317.4 213 76.5
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 2.0e-81 306.2 201 77.1
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 1.1e-63 247.3 198 66.7
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 2.8e-62 242.7 192 64.6
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 3.6e-62 242.3 201 65.2
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 7.6e-60 234.6 199 61.8
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 2.9e-59 232.6 192 60.4
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 3.7e-59 232.3 196 61.7
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 4.9e-59 231.9 197 62.9
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 8.4e-59 231.1 193 60.1
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 1.4e-58 230.3 199 62.8
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.9e-58 229.9 194 60.8
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.4e-58 229.6 192 63.0
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 5.4e-58 228.4 198 63.6
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 1.6e-57 226.9 192 62.0
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.6e-57 226.9 192 62.0
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 1.6e-57 226.9 195 61.5
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 2.1e-57 226.5 194 63.4
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 3.5e-57 225.7 197 59.4
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.5e-57 225.7 192 62.0
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 3.5e-57 225.7 192 60.9
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 7.8e-57 224.6 199 59.8
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 7.8e-57 224.6 193 59.6
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 1.0e-56 224.2 194 60.8
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.3e-56 223.8 192 60.4
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 3.9e-56 222.2 192 59.4
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 5.1e-56 221.9 195 58.5
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 6.6e-56 221.5 189 59.8
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 8.6e-56 221.1 196 61.2
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.1e-55 220.7 195 58.5
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.1e-55 220.7 196 59.2
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 3.3e-55 219.2 191 58.6
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 4.3e-55 218.8 201 58.7
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 5.6e-55 218.4 198 56.1
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 5.6e-55 218.4 196 60.2
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 2.1e-54 216.5 191 57.6
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 3.6e-54 215.7 199 59.3
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 4.7e-54 215.3 192 57.8
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.1e-53 214.2 213 55.9
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 1.8e-53 213.4 195 57.4
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.8e-53 213.4 142 71.1
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 4.0e-53 212.2 188 56.9
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 4.0e-53 212.2 198 57.6
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 6.8e-53 211.5 139 69.8
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.2e-52 210.7 181 60.2
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 2.0e-52 209.9 190 56.3
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 4.4e-52 208.8 147 68.7
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 4.4e-52 208.8 193 60.1
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 4.4e-52 208.8 197 56.9
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 5.8e-52 208.4 196 57.7
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 5.8e-52 208.4 219 52.1
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 7.6e-52 208.0 139 67.6
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 7.6e-52 208.0 139 66.9
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 9.9e-52 207.6 182 58.2
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 9.9e-52 207.6 139 68.3
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 9.9e-52 207.6 197 59.4
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.3e-51 207.2 203 59.6
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 1.3e-51 207.2 193 60.6
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 1.7e-51 206.8 186 57.0
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 1.7e-51 206.8 139 65.5
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 1.7e-51 206.8 216 50.5
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 2.2e-51 206.5 186 57.0
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 2.9e-51 206.1 139 70.5
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 3.8e-51 205.7 193 57.5
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.8e-51 205.7 178 61.2
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 4.9e-51 205.3 201 56.2
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 4.9e-51 205.3 193 60.6
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 8.4e-51 204.5 189 58.7
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 1.1e-50 204.1 154 63.6
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.1e-50 204.1 193 53.9
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 1.4e-50 203.8 193 58.0
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.4e-50 203.8 137 67.2
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 1.9e-50 203.4 125 72.8
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 1.9e-50 203.4 198 55.6
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 2.4e-50 203.0 193 58.0
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 2.4e-50 203.0 125 72.8
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 3.2e-50 202.6 190 56.3
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 4.2e-50 202.2 193 57.5
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 4.2e-50 202.2 190 57.4
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 5.4e-50 201.8 192 56.8
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 1.6e-49 200.3 215 51.6
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 1.6e-49 200.3 192 55.7
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.6e-49 200.3 190 55.8
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 4.6e-49 198.7 187 54.5
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 7.8e-49 198.0 195 55.9
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 1.3e-48 197.2 149 61.7
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 3.0e-48 196.1 136 64.0
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 3.0e-48 196.1 136 64.0
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 7.3e-47 191.4 246 46.3
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.8e-46 189.5 135 63.0
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 8.1e-46 188.0 126 65.9
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.4e-45 187.2 136 61.8
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.2e-44 184.1 169 58.6
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 1.5e-44 183.7 226 48.7
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 4.4e-44 182.2 198 53.5
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.3e-43 180.6 111 73.0
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 1.7e-43 180.3 164 55.5
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 4.2e-42 175.6 116 70.7
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 9.3e-42 174.5 134 59.7
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 2.7e-41 172.9 116 70.7
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 6.0e-41 171.8 112 71.4
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 6.0e-41 171.8 146 61.6
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 1.3e-40 170.6 222 47.3
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 2.3e-40 169.9 113 69.9
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 1.1e-39 167.5 112 66.1
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 4.3e-39 165.6 191 50.8
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 1.3e-38 164.1 115 67.0
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 1.1e-37 161.0 148 57.4
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 1.4e-37 160.6 126 59.5
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 1.4e-37 160.6 152 59.9
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 4.0e-37 159.1 152 55.9
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 9.0e-37 157.9 123 56.9
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 9.9e-36 154.5 122 60.7
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 1.3e-35 154.1 155 57.4
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.7e-35 153.7 91 73.6
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 4.6e-33 145.6 116 66.4
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 4.6e-33 145.6 109 64.2
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 4.3e-31 139.0 93 66.7
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 3.7e-30 136.0 109 58.7
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 1.0e-27 127.9 126 48.4
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 2.2e-27 126.7 111 56.8
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 1.3e-24 117.5 116 48.3
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 2.3e-24 116.7 73 72.6
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 1.7e-19 100.5 95 48.4
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 3.8e-19 99.4 122 52.5
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 2.5e-18 96.7 111 42.3
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 4.6e-17 92.4 157 42.7
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 3.0e-16 89.7 148 41.2
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 2.5e-15 86.7 121 44.6
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 1.4e-13 80.9 108 39.8
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 4.4e-07 59.3 43 60.5


User provided reference genes

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