Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G008480 Cucumis sativus L. HOM05D011255 ORTHO05D009486 1.9e-40 168.7 83 100.0
MELO3C022293.2 Cucumis melo HOM05D011255 ORTHO05D009486 1.5e-34 149.1 81 90.1
MELO3C035236.2 Cucumis melo HOM05D011255 ORTHO05D009486 1.3e-20 102.8 81 60.5
MELO3C020152.2 Cucumis melo HOM05D011255 ORTHO05D009486 1.2e-18 96.3 81 63.0
MELO3C034947.2 Cucumis melo HOM05D011255 ORTHO05D009486 4.2e-16 87.8 82 58.5
TWI75G0224 Tripterygium wilfordii HOM05D008542 ORTHO05D009486 2.1e-15 85.5 81 51.9
TWI18G0041 Tripterygium wilfordii HOM05D008542 ORTHO05D009486 2.7e-15 85.1 81 50.6
Sed0014112 Sechium edule HOM05D011255 ORTHO05D009486 8.0e-15 83.6 81 53.1
Eucgr.H01456 Eucalyptus grandis HOM05D008542 ORTHO05D009486 2.6e-13 78.6 81 49.4
CsaV3_6G008470 Cucumis sativus L. HOM05D011255 ORTHO05D009486 6.3e-12 73.9 81 53.1
CsaV3_5G010980 Cucumis sativus L. HOM05D011255 ORTHO05D009486 3.1e-11 71.6 81 54.3
ClCG06G002410 Citrullus lanatus HOM05D011255 ORTHO05D009486 9.1e-11 70.1 76 50.0
Hma1.2p1_0667F.1_g199740 Hydrangea macrophylla HOM05D008542 ORTHO05D009486 1.2e-10 69.7 79 45.6
Potri.002G050150 Populus trichocarpa HOM05D008542 ORTHO05D009486 1.2e-10 69.7 74 48.6
Dinv32906 Davidia involucrata HOM05D008542 ORTHO05D009486 1.6e-10 69.3 80 46.2
ClCG07G005130 Citrullus lanatus HOM05D011255 ORTHO05D009486 2.7e-10 68.6 81 51.9
CsaV3_6G008740 Cucumis sativus L. HOM05D011255 ORTHO05D009486 3.5e-10 68.2 81 45.7
Nitab4.5_0002636g0060 Nicotiana tabacum HOM05D011159 ORTHO05D009486 3.5e-10 68.2 83 42.2
Cpa.g.sc52.57 Carica papaya HOM05D008542 ORTHO05D009486 4.5e-10 67.8 79 43.0
Actinidia24911 Actinidia chinensis HOM05D008542 ORTHO05D009486 7.7e-10 67.0 79 44.3
Nitab4.5_0001729g0040 Nicotiana tabacum HOM05D008542 ORTHO05D009486 7.7e-10 67.0 77 44.2
CiPaw.08G107700 Carya illinoinensis HOM05D008542 ORTHO05D009486 1.0e-09 66.6 79 44.3
ClCG06G002400 Citrullus lanatus HOM05D011255 ORTHO05D009486 1.3e-09 66.2 82 52.4
MELO3C022291.2 Cucumis melo HOM05D006089 ORTHO05D007345 1.7e-09 65.9 82 46.3
QL12p020979 Quercus lobata HOM05D008542 ORTHO05D009486 2.2e-09 65.5 78 46.2
Nitab4.5_0000252g0080 Nicotiana tabacum HOM05D008542 ORTHO05D009486 2.9e-09 65.1 78 41.0
Oeu029462.1 Olea europaea HOM05D008542 ORTHO05D009486 2.9e-09 65.1 74 40.5
Eucgr.K03345 Eucalyptus grandis HOM05D008542 ORTHO05D009486 3.8e-09 64.7 83 42.2
Actinidia09119 Actinidia chinensis HOM05D008542 ORTHO05D009486 5.0e-09 64.3 79 43.0
PGSC0003DMG400012845 Solanum tuberosum HOM05D011159 ORTHO05D009486 8.5e-09 63.5 82 37.8
Actinidia00784 Actinidia chinensis HOM05D008542 ORTHO05D009486 1.1e-08 63.2 79 41.8
CAN.G1549.25 Capsicum annuum HOM05D008542 ORTHO05D009486 1.1e-08 63.2 72 41.7
Nitab4.5_0008064g0010 Nicotiana tabacum HOM05D008542 ORTHO05D009486 1.1e-08 63.2 73 43.8
Rhsim13G0027000 Rhododendron simsii HOM05D008542 ORTHO05D009486 1.1e-08 63.2 76 42.1
Sopen12g007460 Solanum pennellii HOM05D011159 ORTHO05D009486 1.1e-08 63.2 82 39.0
Peaxi162Scf00572g00215 Petunia axillaris HOM05D011159 ORTHO05D009486 1.5e-08 62.8 79 39.2
Solyc12g014580.2 Solanum lycopersicum HOM05D011159 ORTHO05D009486 1.5e-08 62.8 82 37.8
Peaxi162Scf00230g00137 Petunia axillaris HOM05D008542 ORTHO05D009486 1.9e-08 62.4 73 41.1
Solyc06g008650.4 Solanum lycopersicum HOM05D011159 ORTHO05D009486 1.9e-08 62.4 82 37.8
Actinidia21129 Actinidia chinensis HOM05D008542 ORTHO05D009486 2.5e-08 62.0 79 40.5
Aqoxy2G03426 Aquilegia oxysepala HOM05D008542 ORTHO05D009486 2.5e-08 62.0 71 42.3
Sopen06g003410 Solanum pennellii HOM05D011159 ORTHO05D009486 2.5e-08 62.0 82 37.8
COL.COLO4_21518 Corchorus olitorius HOM05D008542 ORTHO05D009486 9.4e-08 60.1 79 36.7
Peaxi162Scf00783g00135 Petunia axillaris HOM05D008542 ORTHO05D009486 9.4e-08 60.1 73 42.5
Lj2A1168T24 Lonicera japonica HOM05D008542 ORTHO05D009486 1.2e-07 59.7 79 36.7
Sabra05G0162200 Salix brachista HOM05D008542 ORTHO05D009486 1.2e-07 59.7 75 40.0
PGR044G1462 Punica granatum HOM05D008542 ORTHO05D009486 1.6e-07 59.3 76 40.8
TAR260G0004 Trochodendron aralioides HOM05D008542 ORTHO05D009486 1.6e-07 59.3 77 39.0
Sabra08G0118400 Salix brachista HOM05D008542 ORTHO05D009486 2.1e-07 58.9 81 37.0
Potri.010G084700 Populus trichocarpa HOM05D008542 ORTHO05D009486 2.7e-07 58.5 81 35.8
Prupe.8G237700 Prunus persica HOM05D008542 ORTHO05D009486 3.6e-07 58.2 81 44.4
CAN.G1492.13 Capsicum annuum HOM05D011159 ORTHO05D009486 8.0e-07 57.0 76 38.2
Cfa006170 Carpinus fangiana HOM05D007167 ORTHO05D009486 8.0e-07 57.0 76 39.5
PGSC0003DMG400005340 Solanum tuberosum HOM05D011159 ORTHO05D009486 1.0e-06 56.6 82 35.4
CAN.G1492.17 Capsicum annuum HOM05D011159 ORTHO05D009486 1.4e-06 56.2 76 35.5
Potri.008G155600 Populus trichocarpa HOM05D008542 ORTHO05D009486 2.3e-06 55.5 80 35.0
GSVIVG01001183001 Vitis vinifera HOM05D008542 ORTHO05D009486 2.3e-06 55.5 47 48.9
Sed0006446 Sechium edule HOM05D011255 ORTHO05D009486 3.0e-06 55.1 99 36.4
PGSC0003DMG400020057 Solanum tuberosum HOM05D008542 ORTHO05D009486 3.0e-06 55.1 73 39.7
vmacro02595 Vaccinium macrocarpon HOM05D008542 ORTHO05D009486 3.0e-06 55.1 76 36.8
Nn1g02377 Nelumbo nucifera HOM05D008542 ORTHO05D009486 6.8e-06 53.9 79 36.7


User provided reference genes

Program Settings