Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G008060 Cucumis sativus L. HOM05D026927 ORTHO05D008531 6.7e-108 394.0 202 100.0
MELO3C022330.2 Cucumis melo HOM05D026927 ORTHO05D008531 1.0e-68 263.8 189 78.3
Sed0005097 Sechium edule HOM05D026927 ORTHO05D008531 2.6e-43 179.5 192 56.8
ClCG06G002000 Citrullus lanatus HOM05D026927 ORTHO05D008531 5.1e-39 165.2 129 72.1
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 2.8e-13 79.7 239 34.3
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 6.2e-13 78.6 239 33.9
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.1e-12 77.8 194 42.3
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.4e-12 77.4 215 34.0
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 1.4e-12 77.4 248 33.1
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.8e-12 77.0 211 37.0
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 5.3e-12 75.5 213 34.3
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 5.3e-12 75.5 202 37.1
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 7.6e-11 71.6 231 34.2
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 1.0e-10 71.2 226 33.6
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 2.9e-10 69.7 196 31.6
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 8.4e-10 68.2 248 33.1
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 8.4e-10 68.2 232 34.9
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.1e-09 67.8 200 30.5
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 1.4e-09 67.4 241 30.7
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 1.9e-09 67.0 136 36.0
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 4.2e-09 65.9 246 30.1
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 7.1e-09 65.1 176 36.4
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.2e-08 64.3 202 30.7
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 2.1e-08 63.5 220 34.5
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 2.1e-08 63.5 197 34.5
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 2.7e-08 63.2 233 34.3
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 1.8e-07 60.5 211 33.2
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 3.0e-07 59.7 189 29.6
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 3.9e-07 59.3 202 32.2
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 6.7e-07 58.5 228 30.3
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 8.7e-07 58.2 210 31.9
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 8.7e-07 58.2 202 31.7
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 8.7e-07 58.2 231 29.0
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 8.7e-07 58.2 197 34.0
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 8.7e-07 58.2 204 31.4
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.3e-06 56.2 220 30.5
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 7.4e-06 55.1 111 36.9
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 9.7e-06 54.7 183 30.1
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 9.7e-06 54.7 145 32.4


User provided reference genes

Program Settings