Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 1.2e-52 209.5 107 100.0
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 2.0e-42 175.6 93 97.8
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 1.3e-41 172.9 93 94.6
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 9.6e-37 156.8 93 86.0
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.3e-33 146.4 91 76.9
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 5.4e-32 141.0 91 72.5
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.6e-31 139.4 93 78.5
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 3.0e-30 135.2 75 86.7
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 3.9e-30 134.8 93 74.2
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 3.3e-29 131.7 91 71.4
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 3.3e-29 131.7 91 71.4
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 3.3e-29 131.7 91 71.4
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 5.6e-29 131.0 91 70.3
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 5.6e-29 131.0 91 68.1
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 1.3e-28 129.8 94 69.1
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 2.8e-28 128.6 111 60.4
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.2e-28 127.5 91 71.4
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 8.1e-28 127.1 82 74.4
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 8.1e-28 127.1 91 69.2
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 8.1e-28 127.1 93 65.6
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.1e-27 126.7 91 69.2
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.1e-27 126.7 91 69.2
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 1.1e-27 126.7 89 65.2
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 1.1e-27 126.7 73 83.6
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 1.1e-27 126.7 75 77.3
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 1.8e-27 125.9 91 67.0
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 1.8e-27 125.9 91 71.4
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 1.8e-27 125.9 93 66.7
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.8e-27 125.9 91 70.3
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 2.4e-27 125.6 72 81.9
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.4e-27 125.6 82 74.4
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 9.0e-27 123.6 89 71.9
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 9.0e-27 123.6 72 81.9
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 1.5e-26 122.9 80 76.2
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 1.5e-26 122.9 89 67.4
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 1.5e-26 122.9 77 72.7
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 2.0e-26 122.5 73 78.1
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 2.6e-26 122.1 90 65.6
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 2.6e-26 122.1 72 83.3
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 2.6e-26 122.1 92 67.4
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 2.6e-26 122.1 77 74.0
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 2.6e-26 122.1 91 65.9
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 3.4e-26 121.7 89 67.4
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.4e-26 121.7 91 67.0
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 4.5e-26 121.3 82 70.7
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 5.8e-26 120.9 93 63.4
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 5.8e-26 120.9 91 69.2
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 1.3e-25 119.8 91 63.7
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 2.9e-25 118.6 90 64.4
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 3.8e-25 118.2 91 70.3
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 6.4e-25 117.5 91 68.1
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.1e-24 116.7 92 64.1
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.1e-24 116.7 92 64.1
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 1.1e-24 116.7 93 65.6
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.9e-24 115.9 92 64.1
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 2.4e-24 115.5 74 70.3
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 3.2e-24 115.2 76 72.4
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 5.4e-24 114.4 73 72.6
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 7.1e-24 114.0 93 61.3
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 7.1e-24 114.0 92 65.2
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 9.3e-24 113.6 92 63.0
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 9.3e-24 113.6 91 63.7
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.2e-23 113.2 83 62.7
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 3.5e-23 111.7 92 63.0
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 1.0e-22 110.2 75 66.7
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 1.3e-22 109.8 74 68.9
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 1.3e-22 109.8 91 56.0
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.3e-22 109.8 72 70.8
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 1.3e-22 109.8 91 61.5
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 3.9e-22 108.2 72 72.2
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 6.7e-22 107.5 76 67.1
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 8.7e-22 107.1 85 63.5
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.1e-21 106.7 91 61.5
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 1.5e-21 106.3 85 63.5
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 1.9e-21 105.9 69 69.6
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 2.5e-21 105.5 71 70.4
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 3.3e-21 105.1 85 62.4
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 9.6e-21 103.6 93 55.9
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.4e-19 99.8 53 83.0
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 1.4e-19 99.8 72 68.1
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 4.0e-19 98.2 65 69.2
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 5.3e-19 97.8 93 55.9
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 1.4e-16 89.7 105 46.7
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 3.0e-14 82.0 85 44.7
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 4.3e-13 78.2 49 73.5
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 2.8e-12 75.5 50 72.0
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 3.7e-12 75.1 62 54.8
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 1.1e-11 73.6 55 63.6
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 6.9e-11 70.9 51 64.7
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 4.9e-09 64.7 92 42.4
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 6.5e-09 64.3 41 68.3
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 7.9e-07 57.4 50 58.0


User provided reference genes

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