Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 2.1e-211 738.8 374 100.0
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 1.5e-201 706.1 375 95.7
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 7.6e-174 614.0 467 71.1
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 6.5e-165 584.3 374 80.7
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 2.6e-153 545.8 374 79.4
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 4.1e-143 511.9 368 73.1
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 2.7e-142 509.2 370 72.2
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 2.7e-142 509.2 362 72.7
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 8.5e-141 504.2 363 71.1
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 2.1e-139 499.6 363 72.2
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 2.7e-139 499.2 365 72.6
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 6.1e-139 498.0 357 72.0
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 1.8e-138 496.5 365 72.6
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 2.3e-138 496.1 369 71.0
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 2.3e-138 496.1 305 80.7
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 2.3e-138 496.1 361 69.3
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 8.8e-138 494.2 367 71.1
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 1.5e-137 493.4 365 70.1
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 2.0e-137 493.0 327 75.2
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 2.0e-137 493.0 364 70.6
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 2.0e-137 493.0 368 70.7
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 4.4e-137 491.9 363 70.5
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 7.5e-137 491.1 354 71.5
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.3e-136 490.3 318 77.0
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 2.2e-136 489.6 363 70.2
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 2.2e-136 489.6 354 70.6
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 3.7e-136 488.8 357 71.1
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 6.3e-136 488.0 365 71.2
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 6.3e-136 488.0 345 73.6
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 6.3e-136 488.0 340 72.9
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 8.3e-136 487.6 374 68.7
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 1.8e-135 486.5 368 69.3
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 1.8e-135 486.5 363 70.0
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 2.4e-135 486.1 366 68.6
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 4.1e-135 485.3 305 78.0
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.6e-134 483.4 421 63.7
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 2.0e-134 483.0 358 70.4
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 2.7e-134 482.6 366 69.4
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 2.7e-134 482.6 361 69.0
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 3.5e-134 482.3 318 76.1
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 7.7e-134 481.1 303 78.9
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.3e-133 480.3 318 75.5
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.7e-133 479.9 332 74.4
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 3.8e-133 478.8 365 67.9
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 1.1e-132 477.2 312 77.2
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 1.1e-132 477.2 333 73.6
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 1.5e-132 476.9 373 68.9
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 1.5e-132 476.9 365 69.0
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 9.5e-132 474.2 335 71.6
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 2.1e-131 473.0 337 72.4
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 2.1e-131 473.0 364 67.6
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 2.1e-131 473.0 364 67.3
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 2.8e-131 472.6 335 73.1
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 2.3e-130 469.5 328 72.0
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.3e-130 469.5 317 75.1
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 8.9e-130 467.6 305 76.4
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 8.9e-130 467.6 309 76.4
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 8.9e-130 467.6 310 75.5
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 2.6e-129 466.1 335 69.0
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 2.6e-129 466.1 316 73.4
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 4.4e-129 465.3 372 66.4
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 7.5e-129 464.5 361 68.1
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 1.3e-128 463.8 322 70.5
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 1.3e-128 463.8 300 77.7
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 3.7e-128 462.2 300 74.0
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 4.9e-128 461.8 336 68.5
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 6.3e-128 461.5 322 70.5
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 8.3e-128 461.1 300 73.7
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 8.3e-128 461.1 303 73.9
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 8.3e-128 461.1 303 73.9
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 1.8e-127 459.9 304 74.7
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 3.1e-127 459.1 299 73.6
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 5.4e-127 458.4 300 77.7
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 4.5e-126 455.3 322 69.9
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 5.9e-126 454.9 335 67.5
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.3e-124 449.1 295 75.6
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 2.8e-123 446.0 277 78.3
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 1.4e-122 443.7 283 75.3
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 2.0e-121 439.9 309 70.9
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 5.8e-121 438.3 300 73.3
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 2.2e-120 436.4 307 71.0
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 1.1e-119 434.1 317 70.3
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 1.4e-114 417.2 307 69.7
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.3e-114 416.4 318 66.7
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.5e-113 413.7 459 52.1
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 2.6e-113 412.9 305 68.2
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 5.8e-113 411.8 308 67.5
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 2.3e-109 399.8 328 61.9
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.2e-107 394.0 293 66.6
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 6.8e-106 388.3 466 50.6
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 7.5e-105 384.8 294 69.0
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 2.7e-102 376.3 308 62.3
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 4.3e-100 369.0 214 84.1
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.8e-91 339.7 209 81.8
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 7.1e-87 325.1 328 54.0
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 4.6e-86 322.4 197 79.7
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 3.8e-80 302.8 167 89.2
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 6.4e-80 302.0 249 64.3
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 6.4e-80 302.0 249 64.3
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.4e-79 300.1 198 76.3
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 1.2e-78 297.7 164 88.4
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.1e-74 283.1 186 76.3
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 6.9e-74 282.0 186 75.8
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 2.2e-72 276.9 309 51.8
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.5e-71 273.5 189 74.6
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.2e-70 271.2 264 51.1
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.0e-69 268.1 167 79.6
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 3.4e-65 253.1 147 84.4
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 8.7e-61 238.4 187 65.2
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 2.5e-60 236.9 144 77.8
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.0e-57 227.3 216 56.0
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.9e-57 225.7 259 47.5
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.5e-52 210.3 141 68.8
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.4e-44 183.0 100 88.0
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.7e-35 154.5 99 74.7
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 5.5e-31 139.4 235 37.0
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 7.2e-31 139.0 111 61.3
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 1.1e-26 125.2 80 78.8
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.0e-21 108.6 104 48.1
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.0e-21 108.6 258 31.4
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 1.9e-15 87.8 48 81.2
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.3e-11 75.1 47 80.9
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 8.6e-08 62.4 71 47.9


User provided reference genes

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