Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 4.0e-193 677.9 344 100.0
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.4e-153 546.6 374 79.4
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 2.1e-146 522.7 375 76.8
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 8.7e-124 447.6 467 56.7
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 5.0e-111 405.2 374 62.6
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 1.8e-97 360.1 369 58.0
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 3.8e-95 352.4 370 57.0
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 1.9e-94 350.1 362 56.6
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 4.2e-94 349.0 367 55.3
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 5.5e-94 348.6 330 59.1
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 2.1e-93 346.7 361 56.2
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 1.4e-92 344.0 361 53.2
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 4.0e-92 342.4 369 54.7
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 5.2e-92 342.0 371 54.4
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 6.7e-92 341.7 297 61.6
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 8.8e-92 341.3 354 55.9
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 1.1e-91 340.9 366 56.3
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.0e-91 340.1 305 60.3
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 2.0e-91 340.1 371 54.4
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 2.6e-91 339.7 365 56.2
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 5.7e-91 338.6 345 56.8
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 1.3e-90 337.4 363 54.5
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 1.7e-90 337.0 361 54.6
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.7e-90 337.0 357 54.6
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 2.2e-90 336.7 367 54.8
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 2.2e-90 336.7 422 50.5
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 6.3e-90 335.1 305 61.0
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 6.3e-90 335.1 316 57.6
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 8.2e-90 334.7 365 53.4
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 1.4e-89 334.0 379 52.5
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 2.4e-89 333.2 374 52.4
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 2.4e-89 333.2 363 55.1
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 4.1e-89 332.4 332 57.2
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 4.1e-89 332.4 370 54.1
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 5.3e-89 332.0 363 54.5
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 7.0e-89 331.6 379 51.7
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 9.1e-89 331.3 366 53.0
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 1.6e-88 330.5 367 52.9
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 2.0e-88 330.1 364 53.8
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 5.9e-88 328.6 365 54.8
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 7.7e-88 328.2 318 57.9
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.0e-87 327.8 365 52.6
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 1.0e-87 327.8 365 54.0
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 1.0e-87 327.8 335 55.2
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 1.3e-87 327.4 312 59.0
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 1.3e-87 327.4 335 54.9
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 1.7e-87 327.0 335 54.6
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 5.0e-87 325.5 366 53.0
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.9e-86 323.6 364 52.2
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 2.5e-86 323.2 361 52.6
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 4.2e-86 322.4 337 54.9
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 4.2e-86 322.4 358 53.6
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 9.4e-86 321.2 303 59.1
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 1.2e-85 320.9 333 55.9
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 4.7e-85 318.9 335 53.4
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 4.7e-85 318.9 305 57.7
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 4.7e-85 318.9 298 59.7
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 8.0e-85 318.2 373 52.8
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 3.0e-84 316.2 372 51.3
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 4.0e-84 315.8 284 60.6
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 8.8e-84 314.7 301 57.1
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 8.8e-84 314.7 336 53.0
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 8.8e-84 314.7 309 57.6
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 1.5e-83 313.9 300 56.7
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 2.0e-83 313.5 300 56.7
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 2.6e-83 313.2 309 55.3
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 3.4e-83 312.8 331 52.3
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 3.4e-83 312.8 322 53.7
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 3.4e-83 312.8 361 52.9
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 4.4e-83 312.4 303 56.8
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 4.4e-83 312.4 303 56.8
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 4.4e-83 312.4 349 52.7
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 1.3e-82 310.8 299 56.5
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 2.8e-82 309.7 304 56.2
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 2.8e-82 309.7 322 53.7
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 3.7e-82 309.3 335 52.2
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 2.4e-81 306.6 361 52.6
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 7.0e-81 305.1 336 53.0
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 2.0e-80 303.5 307 55.0
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 4.5e-80 302.4 277 58.8
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 2.9e-79 299.7 295 56.9
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 5.5e-78 295.4 283 57.2
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 4.0e-76 289.3 307 54.4
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.7e-74 283.9 318 50.9
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 2.9e-71 273.1 308 51.3
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 6.1e-69 265.4 328 47.0
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 1.0e-68 264.6 305 50.5
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 2.3e-68 263.5 459 39.7
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 3.0e-68 263.1 288 52.8
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.2e-67 261.2 293 50.2
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 1.0e-63 248.1 308 46.8
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.9e-63 246.1 190 68.4
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 9.5e-62 241.5 466 37.8
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 8.9e-60 235.0 190 65.3
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.4e-57 227.6 199 61.3
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 5.4e-57 225.7 167 70.7
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 5.4e-57 225.7 187 65.8
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 2.7e-56 223.4 156 71.8
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 4.6e-56 222.6 253 51.8
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 2.3e-55 220.3 253 51.4
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 2.8e-53 213.4 285 46.3
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.8e-52 210.7 328 41.5
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.3e-52 210.3 187 60.4
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.3e-52 210.3 187 60.4
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.2e-49 199.9 177 62.1
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.9e-47 193.0 172 60.5
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 8.9e-44 181.8 147 66.0
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 5.4e-41 172.6 114 75.4
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.1e-40 170.6 106 77.4
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 7.3e-38 162.2 264 36.7
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 1.2e-35 154.8 144 56.2
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 8.4e-34 148.7 216 43.1
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 6.2e-29 132.5 141 48.9
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 6.0e-24 115.9 260 33.8
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.2e-19 101.7 72 68.1
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.5e-16 90.1 258 27.5
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 1.9e-14 84.3 62 69.4
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 7.4e-14 82.4 48 72.9
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 6.2e-13 79.3 81 49.4
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 5.5e-09 66.2 234 24.8
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 3.0e-07 60.5 49 51.0


User provided reference genes

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