Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 9.2e-86 320.1 150 100.0
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 5.8e-64 247.7 135 86.7
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 1.1e-59 233.4 113 93.8
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 4.0e-57 224.9 113 90.3
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 4.0e-57 224.9 135 78.5
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 5.2e-57 224.6 140 75.0
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 6.8e-57 224.2 113 89.4
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 6.8e-57 224.2 113 90.3
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 6.8e-57 224.2 113 89.4
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 1.2e-56 223.4 113 88.5
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 1.5e-56 223.0 113 90.3
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 1.5e-56 223.0 113 88.5
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 1.5e-56 223.0 113 88.5
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 3.4e-56 221.9 113 88.5
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 4.4e-56 221.5 113 88.5
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 5.8e-56 221.1 113 86.7
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 7.6e-56 220.7 113 87.6
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 7.6e-56 220.7 113 89.4
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 9.9e-56 220.3 113 88.5
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 1.3e-55 219.9 113 87.6
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 1.7e-55 219.5 113 85.8
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 2.2e-55 219.2 113 87.6
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 2.9e-55 218.8 113 86.7
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 2.9e-55 218.8 113 85.0
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 2.9e-55 218.8 113 88.5
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 2.9e-55 218.8 113 85.8
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 3.8e-55 218.4 113 85.0
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 3.8e-55 218.4 113 86.7
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 6.4e-55 217.6 113 86.7
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 8.4e-55 217.2 135 77.0
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 8.4e-55 217.2 113 85.0
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 8.4e-55 217.2 136 76.5
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 1.1e-54 216.9 113 86.7
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 1.1e-54 216.9 113 86.7
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.1e-54 216.9 113 85.0
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.4e-54 216.5 113 86.7
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.4e-54 216.5 113 88.5
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 1.9e-54 216.1 113 85.8
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 2.4e-54 215.7 113 85.0
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 3.2e-54 215.3 113 85.0
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.2e-54 215.3 113 86.7
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.2e-54 215.3 113 86.7
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 3.2e-54 215.3 113 84.1
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 3.2e-54 215.3 113 84.1
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 3.2e-54 215.3 113 84.1
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 4.1e-54 214.9 113 84.1
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 4.1e-54 214.9 113 84.1
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 7.1e-54 214.2 113 85.0
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 7.1e-54 214.2 113 83.2
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 9.2e-54 213.8 113 86.7
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 1.2e-53 213.4 113 85.8
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.6e-53 213.0 113 83.2
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 2.1e-53 212.6 113 85.8
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 2.7e-53 212.2 113 85.0
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 2.7e-53 212.2 113 86.7
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 2.7e-53 212.2 113 86.7
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 2.7e-53 212.2 113 86.7
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.5e-53 211.8 113 85.0
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 3.5e-53 211.8 113 84.1
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 4.6e-53 211.5 113 82.3
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 4.6e-53 211.5 113 83.2
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 4.6e-53 211.5 113 83.2
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 4.6e-53 211.5 113 84.1
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 4.6e-53 211.5 113 82.3
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 4.6e-53 211.5 113 83.2
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 4.6e-53 211.5 113 83.2
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 6.0e-53 211.1 113 82.3
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 6.0e-53 211.1 113 83.2
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 1.0e-52 210.3 113 81.4
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 1.0e-52 210.3 113 81.4
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 1.0e-52 210.3 113 85.0
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 1.3e-52 209.9 113 81.4
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 1.3e-52 209.9 113 83.2
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 1.3e-52 209.9 113 83.2
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 1.7e-52 209.5 113 81.4
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 1.7e-52 209.5 113 84.1
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 2.3e-52 209.1 113 84.1
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 2.3e-52 209.1 113 82.3
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 3.0e-52 208.8 113 82.3
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 3.0e-52 208.8 113 84.1
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 5.1e-52 208.0 113 84.1
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 5.1e-52 208.0 113 81.4
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 6.6e-52 207.6 113 81.4
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 6.6e-52 207.6 113 79.6
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 6.6e-52 207.6 113 80.5
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 6.6e-52 207.6 106 86.8
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 8.6e-52 207.2 113 81.4
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 1.1e-51 206.8 113 80.5
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 1.1e-51 206.8 113 82.3
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 1.9e-51 206.1 113 79.6
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 1.9e-51 206.1 113 83.2
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.9e-51 206.1 113 81.4
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 2.5e-51 205.7 113 81.4
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 3.3e-51 205.3 113 82.3
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 3.3e-51 205.3 113 81.4
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 3.3e-51 205.3 113 81.4
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 4.3e-51 204.9 113 81.4
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 4.3e-51 204.9 158 65.8
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 4.3e-51 204.9 135 71.9
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 4.3e-51 204.9 113 79.6
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 4.3e-51 204.9 113 79.6
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 7.3e-51 204.1 110 80.9
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 7.3e-51 204.1 113 79.6
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 9.6e-51 203.8 110 80.9
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 9.6e-51 203.8 110 80.9
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 9.6e-51 203.8 110 80.9
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 9.6e-51 203.8 113 81.4
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 1.6e-50 203.0 113 79.6
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 6.2e-50 201.1 113 77.0
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 6.2e-50 201.1 113 78.8
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 1.8e-49 199.5 113 79.6
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 2.4e-49 199.1 110 79.1
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 5.2e-49 198.0 114 78.9
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 2.0e-48 196.1 106 81.1
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 2.0e-48 196.1 114 78.1
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 7.6e-48 194.1 113 76.1
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 2.9e-47 192.2 113 74.3
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 3.8e-47 191.8 131 71.8
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 1.1e-46 190.3 137 66.4
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 7.1e-46 187.6 106 79.2
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 2.1e-42 176.0 99 78.8
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 1.1e-41 173.7 199 47.2
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 5.3e-41 171.4 78 100.0
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 1.5e-40 169.9 98 77.6
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 3.4e-40 168.7 88 83.0
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 1.1e-35 153.7 73 94.5
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 1.6e-34 149.8 78 88.5
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 2.9e-31 139.0 112 62.5
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.1e-27 127.1 79 77.2
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 7.6e-24 114.4 113 54.0
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 6.0e-21 104.8 103 50.5
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 2.5e-19 99.4 108 47.2
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 8.2e-18 94.4 112 43.8
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 3.4e-16 89.0 49 79.6
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 2.3e-12 76.3 47 74.5
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 6.7e-12 74.7 123 38.2
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 7.4e-11 71.2 35 88.6
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 1.7e-10 70.1 40 85.0
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 6.9e-09 64.7 35 74.3


User provided reference genes

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