Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 3.9e-160 568.2 302 100.0
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 1.6e-145 519.6 313 91.7
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.0e-139 500.4 302 90.1
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.4e-117 426.0 302 79.8
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.0e-92 343.2 282 68.1
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.0e-91 340.9 293 64.8
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.5e-90 337.0 289 66.1
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 4.2e-90 335.5 282 66.0
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 4.2e-90 335.5 274 67.5
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.2e-89 334.0 261 70.1
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 2.7e-89 332.8 282 66.3
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 4.7e-89 332.0 310 62.3
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 8.0e-89 331.3 214 79.9
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 1.0e-88 330.9 287 65.5
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.0e-88 330.9 271 66.4
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.4e-88 330.5 252 69.8
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.8e-88 330.1 252 70.2
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 3.0e-88 329.3 269 66.2
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 8.8e-88 327.8 280 66.4
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 2.6e-87 326.2 285 63.2
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 7.5e-87 324.7 313 61.7
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 3.7e-86 322.4 306 61.4
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.8e-85 320.1 227 72.2
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.8e-85 320.1 249 67.5
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 4.1e-85 318.9 288 62.2
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 7.0e-85 318.2 285 63.2
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 9.1e-85 317.8 255 67.8
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 2.7e-84 316.2 306 60.5
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.5e-84 315.8 215 74.0
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.9e-82 310.1 287 63.1
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 4.2e-82 308.9 280 61.8
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 9.5e-82 307.8 261 63.6
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 2.8e-81 306.2 253 66.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.8e-81 306.2 289 63.0
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 3.0e-80 302.8 208 76.0
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.0e-80 302.4 244 65.6
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 5.2e-80 302.0 293 59.4
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 5.2e-80 302.0 279 61.3
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.2e-79 300.8 283 59.7
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.5e-79 300.4 264 63.3
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 2.6e-79 299.7 276 61.2
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 5.7e-79 298.5 275 60.4
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.7e-78 297.0 292 59.9
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.2e-78 296.6 291 59.5
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 4.9e-78 295.4 283 60.1
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 6.4e-78 295.0 244 64.3
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 6.4e-78 295.0 208 74.5
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.1e-77 294.3 240 65.0
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.8e-77 293.5 272 60.7
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 3.2e-77 292.7 266 62.4
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 4.1e-77 292.4 193 77.2
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 2.0e-76 290.0 287 56.8
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 4.6e-76 288.9 213 70.9
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 1.0e-75 287.7 241 61.8
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.0e-75 287.7 262 59.5
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.3e-75 286.6 296 58.4
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 6.6e-75 285.0 244 61.5
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 8.6e-75 284.6 289 58.5
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 4.3e-74 282.3 256 58.2
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 9.5e-74 281.2 243 64.6
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 9.5e-74 281.2 268 59.0
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 1.2e-73 280.8 263 60.5
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.6e-73 280.4 296 55.7
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.6e-73 280.4 284 57.7
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 3.6e-73 279.3 266 59.0
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 3.6e-73 279.3 249 62.2
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 1.4e-72 277.3 263 60.5
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 3.1e-72 276.2 258 58.1
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.0e-71 273.5 218 67.0
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 2.0e-71 273.5 220 69.1
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.6e-71 273.1 263 59.7
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 3.4e-71 272.7 175 79.4
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.4e-71 272.7 218 66.5
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 3.4e-71 272.7 207 69.1
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.0e-67 261.2 215 64.2
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.0e-67 261.2 217 67.3
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 3.0e-67 259.6 189 72.0
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 9.5e-66 254.6 303 52.5
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.6e-65 253.8 209 61.7
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 1.6e-65 253.8 248 54.4
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 4.7e-65 252.3 372 48.7
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.3e-64 250.0 180 70.6
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.3e-64 250.0 296 51.7
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 4.0e-64 249.2 312 51.9
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 6.8e-64 248.4 211 58.8
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-63 247.7 296 51.4
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 3.4e-63 246.1 219 58.0
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 4.4e-63 245.7 178 73.0
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 2.2e-62 243.4 262 57.6
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 4.9e-62 242.3 261 57.5
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 4.6e-60 235.7 202 58.4
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.0e-59 234.6 196 65.8
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.6e-57 227.3 266 51.1
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.1e-57 226.9 219 57.1
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 1.5e-55 220.7 220 57.7
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 4.9e-54 215.7 185 65.4
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 2.7e-52 209.9 300 45.7
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.7e-51 207.2 136 77.9
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.8e-49 199.9 179 60.9
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 4.7e-49 199.1 190 59.5
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.5e-47 194.1 217 53.9
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 4.6e-44 182.6 214 43.9
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 3.9e-43 179.5 275 45.5
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.1e-40 171.4 110 74.5
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 2.4e-40 170.2 181 56.4
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.2e-39 167.9 143 58.0
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.2e-39 167.9 200 52.5
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 5.4e-37 159.1 190 44.2
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.0e-35 154.8 216 46.8
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.5e-34 151.0 116 67.2
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 2.5e-34 150.2 189 50.3
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 4.8e-33 146.0 234 42.7
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.5e-31 141.0 159 54.1
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 9.0e-24 115.2 187 39.0
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.2e-20 104.8 145 48.3
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 1.8e-19 100.9 178 33.7
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 1.4e-16 91.3 192 33.9
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 9.0e-16 88.6 80 56.2
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 1.4e-13 81.3 69 63.8
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.6e-12 77.8 96 44.8
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 9.7e-10 68.6 52 65.4
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 9.0e-08 62.0 39 74.4


User provided reference genes

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