Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 3.1e-129 465.3 261 100.0
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 3.8e-119 431.8 261 94.3
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 5.1e-116 421.4 261 88.9
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 6.9e-97 357.8 263 78.7
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 1.0e-95 354.0 263 74.9
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 1.4e-70 270.4 259 55.6
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 2.1e-69 266.5 210 66.2
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 2.7e-69 266.2 268 56.3
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 3.6e-69 265.8 272 58.1
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 1.4e-68 263.8 265 55.8
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 2.3e-68 263.1 274 54.7
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 5.1e-68 261.9 205 62.4
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 8.8e-68 261.2 269 60.6
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 2.0e-67 260.0 271 52.4
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.0e-67 260.0 276 56.2
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 2.0e-67 260.0 270 55.9
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 2.6e-67 259.6 192 65.1
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 2.6e-67 259.6 268 55.6
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 3.3e-67 259.2 277 53.1
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 3.3e-67 259.2 212 63.7
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 4.4e-67 258.8 205 62.0
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 4.4e-67 258.8 209 62.2
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 5.7e-67 258.5 194 68.0
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 5.7e-67 258.5 194 68.0
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 7.4e-67 258.1 198 65.2
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 7.4e-67 258.1 267 64.0
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 9.7e-67 257.7 196 65.8
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 4.8e-66 255.4 189 68.3
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 4.8e-66 255.4 189 66.7
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 4.8e-66 255.4 192 64.1
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 6.3e-66 255.0 211 63.5
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 8.2e-66 254.6 194 67.0
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 1.1e-65 254.2 189 69.8
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 1.8e-65 253.4 186 67.7
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 1.8e-65 253.4 269 59.9
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 4.1e-65 252.3 269 60.6
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 5.3e-65 251.9 213 61.0
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 9.1e-65 251.1 271 52.0
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 9.1e-65 251.1 267 52.1
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 4.5e-64 248.8 186 65.1
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 5.9e-64 248.4 205 60.5
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 1.3e-63 247.3 272 52.9
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 1.3e-63 247.3 261 55.9
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 1.3e-63 247.3 193 65.8
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 1.7e-63 246.9 251 52.2
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 1.7e-63 246.9 277 56.7
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 2.2e-63 246.5 262 53.1
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 5.0e-63 245.4 187 66.3
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 6.5e-63 245.0 194 61.9
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 6.5e-63 245.0 198 63.1
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 8.5e-63 244.6 178 67.4
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 1.1e-62 244.2 200 63.5
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.1e-62 244.2 260 59.2
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.9e-62 243.4 273 61.2
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 2.5e-62 243.0 190 65.3
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 2.5e-62 243.0 201 62.7
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 3.2e-62 242.7 266 54.1
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 4.2e-62 242.3 260 56.2
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 1.6e-61 240.4 194 63.4
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 2.1e-61 240.0 211 58.8
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 2.1e-61 240.0 262 60.7
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 4.7e-61 238.8 171 67.8
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 4.7e-61 238.8 213 59.2
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 3.0e-60 236.1 191 62.3
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 3.0e-60 236.1 191 62.3
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 4.0e-60 235.7 202 56.9
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 4.0e-60 235.7 194 61.9
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 8.8e-60 234.6 187 62.0
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 8.8e-60 234.6 192 60.4
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.5e-59 233.8 259 52.9
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 2.6e-59 233.0 267 52.1
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 2.6e-59 233.0 268 50.7
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 4.4e-59 232.3 263 54.4
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 4.4e-59 232.3 192 61.5
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 7.5e-59 231.5 201 61.7
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 1.7e-58 230.3 192 58.9
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 2.8e-58 229.6 283 49.1
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 4.8e-58 228.8 205 61.0
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 6.3e-58 228.4 164 68.3
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 1.8e-57 226.9 175 65.1
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 2.4e-57 226.5 262 49.6
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 2.4e-57 226.5 193 59.6
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 3.1e-57 226.1 260 50.4
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 4.1e-57 225.7 264 54.5
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 4.1e-57 225.7 264 54.5
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 4.1e-57 225.7 264 54.5
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 4.1e-57 225.7 262 51.1
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 5.3e-57 225.3 196 60.2
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 7.0e-57 224.9 201 56.2
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 7.0e-57 224.9 193 59.6
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 1.6e-56 223.8 264 53.0
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.0e-56 223.4 210 55.7
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 2.7e-56 223.0 267 54.7
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 4.5e-56 222.2 266 53.8
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 5.9e-56 221.9 266 53.4
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 1.3e-55 220.7 263 53.2
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 2.2e-55 219.9 264 51.5
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 5.0e-55 218.8 200 55.5
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 6.5e-55 218.4 197 57.9
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 8.5e-55 218.0 265 50.9
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 8.5e-55 218.0 151 69.5
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 1.1e-54 217.6 196 57.1
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 1.1e-54 217.6 190 58.4
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 2.5e-54 216.5 230 52.2
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 4.2e-54 215.7 207 55.6
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 1.2e-53 214.2 202 56.4
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 2.4e-49 199.9 224 50.0
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 4.1e-49 199.1 155 58.1
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 1.5e-43 180.6 159 52.2
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 3.1e-41 172.9 191 52.9
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 7.0e-41 171.8 139 59.7
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.6e-40 170.6 151 54.3
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.6e-40 170.6 161 52.2
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 5.9e-40 168.7 262 42.0
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 1.0e-39 167.9 165 50.3
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 1.9e-38 163.7 160 48.8
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 5.2e-36 155.6 182 44.5
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 1.3e-31 141.0 180 41.1
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 1.3e-31 141.0 114 64.9
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 3.0e-31 139.8 165 44.2
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 1.0e-28 131.3 109 63.3
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 4.4e-27 125.9 171 40.4


User provided reference genes

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