Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.3e-129 466.5 245 100.0
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 2.1e-127 459.1 244 98.4
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 2.5e-125 452.2 244 95.9
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 7.1e-120 434.1 251 90.0
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.0e-110 403.7 244 81.1
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 1.3e-110 403.3 243 82.7
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 3.9e-110 401.7 244 82.8
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 6.7e-110 401.0 244 81.6
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 8.7e-110 400.6 243 81.5
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 8.7e-110 400.6 244 82.0
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.5e-109 399.8 243 81.9
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 3.3e-109 398.7 245 82.0
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 7.4e-109 397.5 243 81.1
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 9.6e-109 397.1 244 79.9
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 2.1e-108 396.0 244 82.0
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 2.8e-108 395.6 242 81.0
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 4.8e-108 394.8 243 80.7
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 4.8e-108 394.8 243 80.2
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 4.8e-108 394.8 243 80.2
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 6.2e-108 394.4 243 81.1
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 8.1e-108 394.0 243 80.2
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 5.3e-107 391.3 244 79.5
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 2.6e-106 389.0 242 79.8
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 2.6e-106 389.0 242 78.5
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 3.4e-106 388.7 239 81.2
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 3.4e-106 388.7 243 79.4
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 4.5e-106 388.3 244 78.7
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 5.8e-106 387.9 244 78.3
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 7.6e-106 387.5 242 79.8
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 2.2e-105 386.0 244 77.5
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 2.2e-105 386.0 242 77.7
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 2.9e-105 385.6 242 77.7
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 4.9e-105 384.8 242 78.1
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 4.9e-105 384.8 242 77.3
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 4.9e-105 384.8 242 77.3
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 8.4e-105 384.0 244 76.6
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.4e-104 383.3 244 76.6
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.4e-104 383.3 244 76.6
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 1.4e-104 383.3 244 77.0
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 1.4e-104 383.3 244 77.0
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 1.4e-104 383.3 244 77.0
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 1.4e-104 383.3 242 78.5
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 2.5e-104 382.5 242 77.7
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 3.2e-104 382.1 244 77.0
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 3.2e-104 382.1 244 76.2
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 4.2e-104 381.7 244 77.0
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 4.2e-104 381.7 244 77.0
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 5.5e-104 381.3 244 76.6
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 7.1e-104 380.9 244 76.2
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 7.1e-104 380.9 244 77.0
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 3.5e-103 378.6 244 76.2
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 3.5e-103 378.6 242 77.3
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 7.9e-103 377.5 244 75.4
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.0e-102 377.1 244 75.4
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.0e-102 377.1 256 73.0
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 1.3e-102 376.7 244 77.0
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 2.3e-102 375.9 244 75.8
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.3e-102 375.9 244 75.8
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 2.3e-102 375.9 244 76.2
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 5.1e-102 374.8 244 75.4
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 5.1e-102 374.8 244 75.0
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 8.7e-102 374.0 264 72.7
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.5e-101 373.2 244 74.2
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.9e-101 372.9 244 76.2
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 2.5e-101 372.5 243 74.1
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 3.3e-101 372.1 243 76.1
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 9.6e-101 370.5 244 77.0
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.6e-100 369.8 243 75.3
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 2.1e-100 369.4 248 73.0
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 2.4e-99 365.9 244 74.2
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.2e-98 363.6 243 75.3
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.2e-98 363.6 244 72.1
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 2.2e-97 359.4 243 72.0
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.1e-96 357.1 239 70.3
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 2.3e-94 349.4 234 74.8
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 2.2e-92 342.8 243 70.4
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.1e-91 340.5 244 70.1
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 6.9e-91 337.8 244 69.3
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.7e-89 333.2 203 82.3
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 8.5e-89 330.9 242 67.4
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 1.1e-88 330.5 203 80.3
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.1e-88 330.5 242 66.5
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.1e-88 330.5 242 67.4
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 1.9e-88 329.7 243 67.9
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 6.1e-87 324.7 217 74.2
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.0e-86 323.9 196 78.1
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 6.7e-86 321.2 217 74.7
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 2.6e-85 319.3 242 64.9
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 3.3e-85 318.9 213 77.0
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 3.3e-85 318.9 243 68.7
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.3e-84 317.0 243 64.2
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 1.2e-79 300.4 193 73.1
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 2.7e-79 299.3 184 82.1
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.4e-78 297.0 202 74.8
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 5.2e-78 295.0 243 65.0
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 1.1e-77 293.9 259 65.6
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 2.6e-77 292.7 244 63.1
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 7.0e-75 284.6 242 61.6
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.3e-68 263.8 242 53.7
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 8.2e-68 261.2 242 52.9
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 2.1e-63 246.5 238 52.5
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 3.4e-61 239.2 155 72.9
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 6.3e-60 235.0 242 45.0
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.4e-59 233.8 240 48.8
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 7.0e-59 231.5 202 64.9
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.6e-50 203.8 152 63.8
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 2.3e-49 199.9 116 79.3
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 1.5e-48 197.2 151 64.9
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 9.5e-48 194.5 159 62.9
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.2e-47 194.1 151 64.2
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 6.1e-47 191.8 120 78.3
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 3.4e-45 186.0 128 73.4
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 6.4e-36 155.2 119 69.7
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 2.0e-34 150.2 231 39.8
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 6.6e-33 145.2 92 76.1
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 2.5e-32 143.3 91 71.4
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 3.3e-32 142.9 102 66.7
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 9.2e-19 98.2 71 66.2
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 5.1e-17 92.4 161 42.2
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 6.9e-14 82.0 230 27.0
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 1.7e-09 67.4 39 74.4
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 2.8e-07 60.1 38 84.2


User provided reference genes

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