Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G003640 Cucumis sativus L. HOM05D000014 ORTHO05D000016 5.8e-36 153.7 76 100.0
ClCG05G013100 Citrullus lanatus HOM05D000014 ORTHO05D000093 1.5e-15 85.9 75 54.7
ClCG07G006040 Citrullus lanatus HOM05D000014 ORTHO05D000016 2.5e-15 85.1 75 53.3
ClCG02G010720 Citrullus lanatus HOM05D000014 ORTHO05D000016 1.8e-13 79.0 75 49.3
ClCG05G011870 Citrullus lanatus HOM05D000014 ORTHO05D000016 2.6e-12 75.1 65 53.8
CANSAT78G1382 Cannabis sativa HOM05D000014 ORTHO05D000016 4.1e-10 67.8 72 43.1
CANSAT01G1394 Cannabis sativa HOM05D000014 ORTHO05D000016 3.5e-09 64.7 72 40.3
CANSAT64G1133 Cannabis sativa HOM05D000014 ORTHO05D000016 3.5e-09 64.7 75 37.3
ClCG10G006240 Citrullus lanatus HOM05D000014 ORTHO05D000016 6.0e-09 63.9 51 58.8
CANSAT11G1900 Cannabis sativa HOM05D000014 ORTHO05D000016 1.3e-08 62.8 72 38.9
CANSAT25G2186 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 62.4 72 38.9
CANSAT54G0792 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 62.4 72 38.9
CANSAT78G1031 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 62.4 72 38.9
CANSAT78G1781 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 62.4 72 38.9
CANSAT78G2236 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 62.4 72 38.9
CANSAT80G0347 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 62.4 72 38.9
CANSAT80G0547 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 62.4 72 38.9
CsaV3_2G010630 Cucumis sativus L. HOM05D000014 ORTHO05D000016 1.7e-08 62.4 58 51.7
CANSAT56G2288 Cannabis sativa HOM05D000014 ORTHO05D000016 2.3e-08 62.0 72 38.9
CANSAT21G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 3.9e-08 61.2 72 38.9
CANSAT78G0106 Cannabis sativa HOM05D000014 ORTHO05D000016 3.9e-08 61.2 72 38.9
CANSAT11G1889 Cannabis sativa HOM05D000014 ORTHO05D000016 5.1e-08 60.8 72 36.1
CANSAT25G0834 Cannabis sativa HOM05D000014 ORTHO05D000016 5.1e-08 60.8 72 37.5
PGR083G0640 Punica granatum HOM05D000014 ORTHO05D000016 5.1e-08 60.8 75 37.3
Atru.chr12.2468 Acer truncatum HOM05D000014 ORTHO05D000016 6.6e-08 60.5 72 37.5
PGR013G0002 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR026G0002 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR031G1008 Punica granatum HOM05D000014 ORTHO05D000093 1.1e-07 59.7 75 36.0
PGR031G1161 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR031G1474 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR031G2833 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR031G3309 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR042G0004 Punica granatum HOM05D000014 ORTHO05D000093 1.1e-07 59.7 75 36.0
PGR042G2691 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR044G0742 Punica granatum HOM05D000014 ORTHO05D000093 1.1e-07 59.7 75 36.0
PGR102G0067 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR102G0138 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR102G0846 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR102G1143 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR142G0256 Punica granatum HOM05D000014 ORTHO05D000093 1.1e-07 59.7 75 36.0
PGR142G0407 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR142G1552 Punica granatum HOM05D000014 ORTHO05D000093 1.1e-07 59.7 75 36.0
PGR142G2478 Punica granatum HOM05D000014 ORTHO05D000016 1.1e-07 59.7 75 36.0
PGR142G1132 Punica granatum HOM05D000014 ORTHO05D000016 1.5e-07 59.3 75 36.0
CANSAT01G2079 Cannabis sativa HOM05D000014 ORTHO05D000016 1.9e-07 58.9 71 38.0
CANSAT54G2205 Cannabis sativa HOM05D000014 ORTHO05D000016 2.5e-07 58.5 72 36.1
Oeu021836.2 Olea europaea HOM05D000014 ORTHO05D000016 2.5e-07 58.5 69 39.1
CANSAT64G2873 Cannabis sativa HOM05D000014 ORTHO05D000016 3.3e-07 58.2 72 36.1
CANSAT78G0146 Cannabis sativa HOM05D000014 ORTHO05D000016 4.3e-07 57.8 72 37.5
SHI49828 Sapria himalayana HOM05D000014 ORTHO05D000016 4.3e-07 57.8 72 38.9
PSO170G1029 Papaver somniferum HOM05D000014 ORTHO05D000016 7.3e-07 57.0 73 37.0
Ca_03125_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.2e-06 56.2 71 33.8
CANSAT25G1880 Cannabis sativa HOM05D000014 ORTHO05D000016 2.1e-06 55.5 75 38.7
CANSAT80G1312 Cannabis sativa HOM05D000014 ORTHO05D000016 2.1e-06 55.5 75 38.7
Ca_11551_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.8e-06 55.1 71 33.8
Lj2g0009123 Lotus japonicus HOM05D000014 ORTHO05D000016 2.8e-06 55.1 73 35.6
CANSAT01G0424 Cannabis sativa HOM05D000014 ORTHO05D000016 3.6e-06 54.7 75 38.7
CANSAT56G0185 Cannabis sativa HOM05D000014 ORTHO05D000016 3.6e-06 54.7 72 37.5
ECA233G1643 Erigeron canadensis HOM05D000014 ORTHO05D000016 3.6e-06 54.7 73 37.0
Oeu036145.1 Olea europaea HOM05D000014 ORTHO05D000016 3.6e-06 54.7 72 37.5
PSO170G6888 Papaver somniferum HOM05D000014 ORTHO05D000016 3.6e-06 54.7 73 34.2
Oeu036985.1 Olea europaea HOM05D000014 ORTHO05D000016 4.7e-06 54.3 72 40.3
PSO339G0601 Papaver somniferum HOM05D000014 ORTHO05D000016 4.7e-06 54.3 66 42.4
Ca_20529_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.2e-06 53.9 71 32.4
ECA236G3031 Erigeron canadensis HOM05D000014 ORTHO05D000016 6.2e-06 53.9 73 37.0
Oeu014642.1 Olea europaea HOM05D000014 ORTHO05D000016 6.2e-06 53.9 72 37.5
PSO063G2332 Papaver somniferum HOM05D000014 ORTHO05D000016 6.2e-06 53.9 66 40.9
ECA236G2844 Erigeron canadensis HOM05D000014 ORTHO05D000016 8.1e-06 53.5 73 35.6
ECA248G2534 Erigeron canadensis HOM05D000014 ORTHO05D000016 8.1e-06 53.5 73 34.2
PSO447G0280 Papaver somniferum HOM05D000014 ORTHO05D000016 8.1e-06 53.5 72 38.9


User provided reference genes

Program Settings