Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G003400 Cucumis sativus L. HOM05D006108 ORTHO05D007605 5.1e-102 374.4 187 100.0
MELO3C011555.2 Cucumis melo HOM05D006108 ORTHO05D007605 4.8e-68 261.5 151 86.8
ClCG08G005220 Citrullus lanatus HOM05D006108 ORTHO05D007605 1.0e-49 200.7 183 61.7
Sed0000256 Sechium edule HOM05D006108 ORTHO05D007605 3.5e-42 175.6 189 56.1
Sed0027931 Sechium edule HOM05D006108 ORTHO05D007605 4.3e-32 142.1 135 60.0
Glyma.01G082600 Glycine max HOM05D006108 ORTHO05D007605 5.6e-24 115.2 78 71.8
Phvul.003G034700 Phaseolus vulgaris HOM05D006108 ORTHO05D007605 4.7e-23 112.1 78 67.9
TPR.G38355 Trifolium pratense HOM05D006108 ORTHO05D007605 5.2e-22 108.6 78 69.2
Medtr5g055190 Medicago truncatula HOM05D006108 ORTHO05D007605 6.8e-22 108.2 82 64.6
AL5G14490 Arabidopsis lyrata HOM05D006108 ORTHO05D007605 4.4e-21 105.5 77 59.7
Psat2g097920 Pisum sativum HOM05D006108 ORTHO05D007605 9.8e-21 104.4 81 61.7
HanXRQChr02g0058721 Helianthus annuus HOM05D006108 ORTHO05D007605 2.2e-20 103.2 81 56.8
CARHR146800 Cardamine hirsuta HOM05D006108 ORTHO05D007605 2.9e-20 102.8 77 59.7
TWI79G0681 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 2.9e-20 102.8 74 62.2
BcaC06g33947 Brassica carinata HOM05D006108 ORTHO05D007605 3.7e-20 102.4 73 63.0
A06p42440 Brassica napus HOM05D006108 ORTHO05D007605 3.7e-20 102.4 86 55.8
BraA06t27159Z Brassica rapa HOM05D006108 ORTHO05D007605 3.7e-20 102.4 86 55.8
Lalb_Chr10g0099931 Lupinus albus HOM05D006108 ORTHO05D007605 3.7e-20 102.4 69 69.6
AT3G25855 Arabidopsis thaliana HOM05D006108 ORTHO05D007605 4.9e-20 102.1 77 58.4
Lsat_1_v5_gn_8_39200 Lactuca sativa HOM05D006108 ORTHO05D007605 4.9e-20 102.1 70 64.3
Prupe.1G308800 Prunus persica HOM05D006108 ORTHO05D007605 4.9e-20 102.1 74 60.8
Migut.L01077 Erythranthe guttata HOM05D006108 ORTHO05D007605 8.3e-20 101.3 69 63.8
Lj2g0013090 Lotus japonicus HOM05D006108 ORTHO05D007605 8.3e-20 101.3 83 61.4
Manes.14G100500 Manihot esculenta HOM05D006108 ORTHO05D007605 8.3e-20 101.3 73 61.6
Sp2g15090 Schrenkiella parvula HOM05D006108 ORTHO05D007605 8.3e-20 101.3 77 58.4
MD13G1043700 Malus domestica HOM05D006108 ORTHO05D007605 1.9e-19 100.1 74 59.5
BolC7t44019H Brassica oleracea HOM05D006108 ORTHO05D007605 2.4e-19 99.8 73 61.6
Carub.0005s0368 Capsella rubella HOM05D006108 ORTHO05D007605 2.4e-19 99.8 92 48.9
Dinv04481 Davidia involucrata HOM05D001580 ORTHO05D001517 2.4e-19 99.8 74 64.9
THA.LOC104824033 Tarenaya hassleriana HOM05D006108 ORTHO05D007605 2.4e-19 99.8 75 62.7
BcaB07g30252 Brassica carinata HOM05D006108 ORTHO05D007605 3.2e-19 99.4 77 55.8
Potri.008G119200 Populus trichocarpa HOM05D006108 ORTHO05D007605 3.2e-19 99.4 72 62.5
C07p34870 Brassica napus HOM05D006108 ORTHO05D007605 4.1e-19 99.0 73 60.3
QL01p043861 Quercus lobata HOM05D006108 ORTHO05D007605 4.1e-19 99.0 87 56.3
TWI31G1391 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 4.1e-19 99.0 83 55.4
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 5.4e-19 98.6 85 57.6
Ciclev10033455m.g Citrus clementina HOM05D006108 ORTHO05D007605 7.1e-19 98.2 68 67.6
Manes.06G070100 Manihot esculenta HOM05D006108 ORTHO05D007605 7.1e-19 98.2 76 59.2
Oeu041896.1 Olea europaea HOM05D006108 ORTHO05D007605 9.2e-19 97.8 73 64.4
A02p34100 Brassica napus HOM05D006108 ORTHO05D007605 1.2e-18 97.4 77 57.1
PSO017G5628 Papaver somniferum HOM05D006108 ORTHO05D007605 1.2e-18 97.4 88 54.5
DCAR_026728 Daucus carota HOM05D006108 ORTHO05D007605 1.6e-18 97.1 80 55.0
Sabra08G0090500 Salix brachista HOM05D006108 ORTHO05D007605 1.6e-18 97.1 72 61.1
CiPaw.15G083500 Carya illinoinensis HOM05D006108 ORTHO05D007605 2.1e-18 96.7 73 61.6
Cc11_g10300 Coffea canephora HOM05D006108 ORTHO05D007605 2.1e-18 96.7 67 68.7
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 2.1e-18 96.7 70 62.9
Thhalv10005176m.g Eutrema salsugineum HOM05D006108 ORTHO05D007605 2.1e-18 96.7 67 62.7
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 2.7e-18 96.3 86 55.8
BcaC03g17291 Brassica carinata HOM05D006108 ORTHO05D007605 3.5e-18 95.9 70 60.0
BolC2t11319H Brassica oleracea HOM05D006108 ORTHO05D007605 3.5e-18 95.9 70 60.0
BcaC06g31111 Brassica carinata HOM05D006108 ORTHO05D007605 6.0e-18 95.1 91 51.6
CSS0049683 Camellia sinensis var. sinensis HOM05D006108 ORTHO05D007605 6.0e-18 95.1 73 61.6
PGR102G2516 Punica granatum HOM05D006108 ORTHO05D007605 6.0e-18 95.1 72 62.5
Eucgr.B03028 Eucalyptus grandis HOM05D006108 ORTHO05D007605 7.8e-18 94.7 74 55.4
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 7.8e-18 94.7 87 51.7
CAN.G388.38 Capsicum annuum HOM05D006108 ORTHO05D007605 1.7e-17 93.6 67 61.2
Nitab4.5_0003285g0040 Nicotiana tabacum HOM05D006108 ORTHO05D007605 2.3e-17 93.2 67 59.7
Sc14g0007540 Simmondsia chinensis HOM05D006108 ORTHO05D007605 2.3e-17 93.2 76 56.6
Gorai.008G184200 Gossypium raimondii HOM05D006108 ORTHO05D007605 3.0e-17 92.8 79 58.2
Oeu008040.1 Olea europaea HOM05D006108 ORTHO05D007605 3.9e-17 92.4 68 61.8
C02p52370 Brassica napus HOM05D006108 ORTHO05D007605 5.1e-17 92.0 67 59.7
FvH4_5g12320 Fragaria vesca HOM05D006108 ORTHO05D007605 5.1e-17 92.0 85 51.8
FAN18G0723 Fragaria x ananassa HOM05D006108 ORTHO05D007605 8.6e-17 91.3 80 51.2
FAN18G1336 Fragaria x ananassa HOM05D006108 ORTHO05D007605 8.6e-17 91.3 80 51.2
Glyma.07G090500 Glycine max HOM05D006108 ORTHO05D007605 8.6e-17 91.3 89 48.3
Glyma.09G185400 Glycine max HOM05D006108 ORTHO05D007605 8.6e-17 91.3 89 46.1
Dinv09807 Davidia involucrata HOM05D006108 ORTHO05D007605 1.1e-16 90.9 70 58.6
FAN13G1808 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.5e-16 90.5 71 56.3
MD16G1044500 Malus domestica HOM05D006108 ORTHO05D007605 1.5e-16 90.5 70 54.3
Nitab4.5_0001914g0010 Nicotiana tabacum HOM05D006108 ORTHO05D007605 1.5e-16 90.5 67 58.2
Prupe.5G220300 Prunus persica HOM05D006108 ORTHO05D007605 1.5e-16 90.5 91 52.7
RcHm_v2.0_Chr7g0185241 Rosa chinensis HOM05D006108 ORTHO05D007605 1.5e-16 90.5 71 56.3
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.9e-16 90.1 82 52.4
Gohir.A12G168100 Gossypium hirsutum HOM05D006108 ORTHO05D007605 1.9e-16 90.1 78 57.7
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 2.5e-16 89.7 84 50.0
BraA02t08427Z Brassica rapa HOM05D006108 ORTHO05D007605 3.3e-16 89.4 67 58.2
Gohir.A09G177600 Gossypium hirsutum HOM05D006108 ORTHO05D007605 3.3e-16 89.4 69 60.9
Gohir.D09G173100 Gossypium hirsutum HOM05D006108 ORTHO05D007605 3.3e-16 89.4 69 60.9
Gorai.006G195000 Gossypium raimondii HOM05D006108 ORTHO05D007605 3.3e-16 89.4 69 60.9
Lj2g0017619 Lotus japonicus HOM05D006108 ORTHO05D007605 4.3e-16 89.0 91 48.4
Psat6g222560 Pisum sativum HOM05D006108 ORTHO05D007605 4.3e-16 89.0 104 41.3
TPR.G35239 Trifolium pratense HOM05D006108 ORTHO05D007605 5.6e-16 88.6 74 52.7
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 5.6e-16 88.6 69 56.5
Gohir.D12G171700 Gossypium hirsutum HOM05D006108 ORTHO05D007605 9.5e-16 87.8 78 57.7
CiPaw.15G129300 Carya illinoinensis HOM05D006108 ORTHO05D007605 1.2e-15 87.4 72 56.9
Manes.05G140027 Manihot esculenta HOM05D006108 ORTHO05D007605 1.6e-15 87.0 71 54.9
Phvul.004G158700 Phaseolus vulgaris HOM05D006108 ORTHO05D007605 1.6e-15 87.0 89 42.7
Rhsim12G0143800 Rhododendron simsii HOM05D006108 ORTHO05D007605 1.6e-15 87.0 72 55.6
FAN08G0393 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.1e-15 86.7 71 53.5
Thecc.03G033400 Theobroma cacao HOM05D006108 ORTHO05D007605 2.1e-15 86.7 69 59.4
QL10p025064 Quercus lobata HOM05D006108 ORTHO05D007605 2.8e-15 86.3 81 49.4
Sopen05g012490 Solanum pennellii HOM05D006108 ORTHO05D007605 2.8e-15 86.3 89 47.2
Atru.chr9.818 Acer truncatum HOM05D006108 ORTHO05D007605 3.6e-15 85.9 70 55.7
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 3.6e-15 85.9 88 42.0
Duzib084G1067 Durio zibethinus HOM05D006108 ORTHO05D007605 8.1e-15 84.7 69 56.5
MD06G1214900 Malus domestica HOM05D006108 ORTHO05D007605 8.1e-15 84.7 82 51.2
Gohir.A09G047400 Gossypium hirsutum HOM05D006108 ORTHO05D007605 1.1e-14 84.3 69 55.1
Gohir.D09G048600 Gossypium hirsutum HOM05D006108 ORTHO05D007605 1.1e-14 84.3 69 55.1
Gorai.006G061500 Gossypium raimondii HOM05D006108 ORTHO05D007605 1.1e-14 84.3 69 55.1
Nn3g17803 Nelumbo nucifera HOM05D006108 ORTHO05D007605 1.1e-14 84.3 71 50.7
HPP92_026959 Vanilla planifolia HOM05D006108 ORTHO05D007605 1.1e-14 84.3 72 51.4
MD14G1225800 Malus domestica HOM05D006108 ORTHO05D007605 2.3e-14 83.2 86 50.0
Sed0021850 Sechium edule HOM05D006108 ORTHO05D007605 2.3e-14 83.2 74 55.4
Ciclev10022919m.g Citrus clementina HOM05D006108 ORTHO05D007605 4.0e-14 82.4 69 56.5
CsaV3_1G006560 Cucumis sativus L. HOM05D006108 ORTHO05D007605 4.0e-14 82.4 70 54.3
Eucgr.B00718 Eucalyptus grandis HOM05D006108 ORTHO05D007605 4.0e-14 82.4 73 49.3
FAN12G0874 Fragaria x ananassa HOM05D006108 ORTHO05D007605 6.8e-14 81.6 89 47.2
Os09g0408550 Oryza sativa ssp. japonica HOM05D006108 ORTHO05D007605 1.5e-13 80.5 71 50.7
Actinidia35084 Actinidia chinensis HOM05D006108 ORTHO05D007605 2.0e-13 80.1 68 54.4
Cfa019791 Carpinus fangiana HOM05D006108 ORTHO05D007605 2.6e-13 79.7 74 54.1
arahy.Tifrunner.gnm1.ann1.1V8BDZ Arachis hypogaea HOM05D006108 ORTHO05D007605 3.4e-13 79.3 68 52.9
arahy.Tifrunner.gnm1.ann1.L19XPP Arachis hypogaea HOM05D006108 ORTHO05D007605 3.4e-13 79.3 68 52.9
Nitab4.5_0001599g0060 Nicotiana tabacum HOM05D006108 ORTHO05D007605 3.4e-13 79.3 74 50.0
Nitab4.5_0004412g0100 Nicotiana tabacum HOM05D006108 ORTHO05D007605 4.4e-13 79.0 86 44.2
Nn4g23806 Nelumbo nucifera HOM05D006108 ORTHO05D007605 9.9e-13 77.8 68 48.5
CDE05G0497 Ceratophyllum demersum HOM05D006108 ORTHO05D007605 1.7e-12 77.0 73 47.9
Sopen03g038460 Solanum pennellii HOM05D006108 ORTHO05D007605 2.2e-12 76.6 85 45.9
PGSC0003DMG402005714 Solanum tuberosum HOM05D006108 ORTHO05D007605 2.2e-12 76.6 86 45.3
Hund05757 Selenicereus undatus HOM05D006108 ORTHO05D007605 4.9e-12 75.5 63 61.9
Cpa.g.sc1.185 Carica papaya HOM05D006108 ORTHO05D007605 1.4e-11 73.9 67 52.2
Zm00001eb099300 Zea mays HOM05D006108 ORTHO05D007605 2.4e-11 73.2 72 45.8
ECA233G5877 Erigeron canadensis HOM05D006108 ORTHO05D007605 4.6e-10 68.9 54 57.4
Rhsim09G0109500 Rhododendron simsii HOM05D006290 ORTHO05D007734 1.9e-08 63.5 43 67.4
arahy.Tifrunner.gnm1.ann1.384K0G Arachis hypogaea HOM05D006108 ORTHO05D007605 4.3e-08 62.4 45 62.2
Duzib151G0401 Durio zibethinus HOM05D009285 ORTHO05D009865 1.2e-07 60.8 78 35.9
Sabra08G0149500 Salix brachista HOM05D000262 ORTHO05D009865 2.1e-07 60.1 86 36.0
Haze_01037 Corylus avellana HOM05D000039 ORTHO05D000366 2.8e-07 59.7 80 31.2
BcaB04g19169 Brassica carinata HOM05D009269 ORTHO05D009865 1.4e-06 57.4 74 32.4
CAN.G438.131 Capsicum annuum HOM05D006108 ORTHO05D007605 1.4e-06 57.4 69 43.5
Ciclev10007094m.g Citrus clementina HOM05D000262 ORTHO05D009865 1.4e-06 57.4 71 36.6
FAN12G0211 Fragaria x ananassa HOM05D000039 ORTHO05D000366 1.4e-06 57.4 89 31.5
FAN12G2901 Fragaria x ananassa HOM05D000039 ORTHO05D000366 1.4e-06 57.4 89 31.5
Zm00001eb078160 Zea mays HOM05D000262 ORTHO05D009865 1.8e-06 57.0 80 36.2
FAN04G0077 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.4e-06 56.6 53 52.8
FAN17G2047 Fragaria x ananassa HOM05D000039 ORTHO05D000366 2.4e-06 56.6 89 31.5
Aa31LG8G8170 Aethionema arabicum HOM05D009269 ORTHO05D009865 3.1e-06 56.2 66 34.8
ClCG04G011190 Citrullus lanatus HOM05D006108 ORTHO05D007605 4.0e-06 55.8 45 55.6
MELO3C021374.2 Cucumis melo HOM05D000262 ORTHO05D009865 4.0e-06 55.8 70 32.9
Thhalv10022291m.g Eutrema salsugineum HOM05D009269 ORTHO05D009865 4.0e-06 55.8 74 32.4
FAN22G1719 Fragaria x ananassa HOM05D000039 ORTHO05D000366 4.0e-06 55.8 89 30.3
SEGI_37086 Sequoiadendron giganteum HOM05D000262 ORTHO05D000300 4.0e-06 55.8 77 31.2
PGSC0003DMG400010902 Solanum tuberosum HOM05D006108 ORTHO05D007605 4.0e-06 55.8 39 61.5
Actinidia00062 Actinidia chinensis HOM05D004069 ORTHO05D004699 5.2e-06 55.5 74 35.1
BcaC01g03501 Brassica carinata HOM05D009269 ORTHO05D009865 5.2e-06 55.5 77 33.8
C03p51740 Brassica napus HOM05D009269 ORTHO05D009865 5.2e-06 55.5 77 33.8
BolC3t17458H Brassica oleracea HOM05D009269 ORTHO05D009865 5.2e-06 55.5 77 33.8
FvH4_3g29750 Fragaria vesca HOM05D009285 ORTHO05D009865 5.2e-06 55.5 85 32.9
Peaxi162Scf00015g00844 Petunia axillaris HOM05D006108 ORTHO05D007605 5.2e-06 55.5 55 49.1
Prupe.1G144000 Prunus persica HOM05D009285 ORTHO05D009865 5.2e-06 55.5 91 28.6
RcHm_v2.0_Chr4g0420551 Rosa chinensis HOM05D009269 ORTHO05D009865 5.2e-06 55.5 71 35.2
Carub.0003s2153 Capsella rubella HOM05D009269 ORTHO05D009865 6.8e-06 55.1 77 28.6
Eucgr.H03665 Eucalyptus grandis HOM05D000262 ORTHO05D009865 6.8e-06 55.1 73 34.2
Gorai.011G184400 Gossypium raimondii HOM05D000262 ORTHO05D009865 6.8e-06 55.1 74 33.8
SalBow2G0330 Salvia bowleyana HOM05D009269 ORTHO05D009865 6.8e-06 55.1 100 29.0
arahy.Tifrunner.gnm1.ann1.B0RIN7 Arachis hypogaea HOM05D000473 ORTHO05D001219 8.9e-06 54.7 83 30.1
A03p42290 Brassica napus HOM05D009269 ORTHO05D009865 8.9e-06 54.7 77 33.8
BraA03t13380Z Brassica rapa HOM05D009269 ORTHO05D009865 8.9e-06 54.7 77 33.8
Manes.15G018700 Manihot esculenta HOM05D000262 ORTHO05D009865 8.9e-06 54.7 70 32.9
THA.LOC104820233 Tarenaya hassleriana HOM05D009269 ORTHO05D009865 8.9e-06 54.7 76 30.3
vmacro15275 Vaccinium macrocarpon HOM05D000262 ORTHO05D009865 8.9e-06 54.7 80 32.5


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