Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 3.7e-85 318.2 161 100.0
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 2.6e-54 215.7 117 92.3
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 1.1e-44 183.7 119 79.0
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 3.7e-16 89.0 111 42.3
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 1.4e-15 87.0 113 42.5
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 2.4e-15 86.3 127 42.5
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 9.1e-15 84.3 99 46.5
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 1.2e-14 84.0 106 47.2
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 1.5e-14 83.6 93 45.2
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.6e-14 82.8 103 39.8
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 2.6e-14 82.8 114 41.2
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 3.4e-14 82.4 114 41.2
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 4.5e-14 82.0 114 41.2
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 4.5e-14 82.0 107 43.0
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 5.9e-14 81.6 108 38.9
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 7.7e-14 81.3 102 45.1
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 7.7e-14 81.3 102 45.1
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 1.0e-13 80.9 104 44.2
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 1.3e-13 80.5 106 44.3
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 1.3e-13 80.5 106 44.3
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.3e-13 80.5 114 40.4
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 2.9e-13 79.3 108 38.9
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 3.8e-13 79.0 98 44.9
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 3.8e-13 79.0 98 44.9
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 5.0e-13 78.6 110 41.8
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 8.5e-13 77.8 98 44.9
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 8.5e-13 77.8 102 39.2
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 1.1e-12 77.4 94 42.6
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 1.4e-12 77.0 112 38.4
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 1.4e-12 77.0 101 41.6
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 1.9e-12 76.6 102 44.1
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 1.9e-12 76.6 114 41.2
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 1.9e-12 76.6 110 38.2
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 1.9e-12 76.6 125 36.8
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 2.5e-12 76.3 103 41.7
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 2.5e-12 76.3 103 44.7
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 3.2e-12 75.9 108 42.6
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 4.2e-12 75.5 102 38.2
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 7.2e-12 74.7 104 40.4
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 7.2e-12 74.7 102 41.2
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 1.2e-11 73.9 108 41.7
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.2e-11 73.9 107 42.1
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 1.6e-11 73.6 103 39.8
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 2.7e-11 72.8 114 41.2
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 3.6e-11 72.4 107 40.2
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 3.6e-11 72.4 93 44.1
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 3.6e-11 72.4 93 44.1
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 8.0e-11 71.2 93 43.0
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 8.0e-11 71.2 114 37.7
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 1.8e-10 70.1 96 40.6
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 2.3e-10 69.7 97 44.3
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 2.3e-10 69.7 101 36.6
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 3.0e-10 69.3 96 42.7
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 3.9e-10 68.9 99 38.4
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.5e-09 67.0 88 42.0
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 7.4e-09 64.7 119 38.7
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 2.4e-07 59.7 67 47.8
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 2.0e-06 56.6 67 44.8
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 5.9e-06 55.1 80 38.8


User provided reference genes

Program Settings