Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1729.1 871 100.0
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 0.0e+00 1561.6 819 92.2
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 0.0e+00 1453.0 870 83.6
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 0.0e+00 1394.8 763 94.1
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1210.7 813 72.0
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1204.9 822 71.0
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1194.5 819 71.2
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1188.3 819 70.2
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1179.1 815 70.8
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1164.8 819 70.5
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1163.3 823 67.7
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1160.6 817 69.8
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1159.1 815 69.7
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1159.1 820 69.1
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1158.7 814 69.0
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1149.8 871 65.6
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1145.2 816 68.6
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1143.6 821 68.1
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1142.5 877 66.2
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 0.0e+00 1141.7 825 67.6
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1141.3 818 67.0
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1137.9 840 66.9
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1136.3 818 68.7
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1135.9 818 66.7
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1134.0 824 66.7
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 0.0e+00 1132.1 816 67.8
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1131.3 818 66.5
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1130.2 878 64.4
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1127.9 816 67.8
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1127.1 816 67.9
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1127.1 817 67.9
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1126.3 822 67.8
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1125.9 835 66.1
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1124.8 820 66.3
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 0.0e+00 1121.7 823 67.2
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 0.0e+00 1121.7 818 67.2
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1119.8 822 65.7
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1119.8 816 67.3
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1118.2 825 66.3
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1116.7 867 63.0
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1114.4 918 61.5
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1114.4 823 67.4
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1112.8 821 65.7
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1112.1 824 65.9
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 0.0e+00 1108.2 791 69.4
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1104.7 817 66.3
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1104.7 819 66.8
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1104.0 818 65.4
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1103.6 817 66.5
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 0.0e+00 1099.7 819 65.2
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1096.3 819 65.3
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 0.0e+00 1094.0 885 60.6
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 0.0e+00 1093.6 817 66.0
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1092.8 817 64.4
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 0.0e+00 1092.0 888 60.9
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 0.0e+00 1092.0 887 60.8
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 0.0e+00 1090.5 879 60.4
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1089.7 823 64.6
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 0.0e+00 1088.9 819 63.5
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 0.0e+00 1088.2 809 66.1
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1087.8 819 64.5
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 0.0e+00 1087.8 819 64.5
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1086.2 817 64.1
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1081.6 826 63.8
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1081.6 820 66.8
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1076.2 762 69.2
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 1.2e-311 1073.2 821 64.1
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 5.9e-310 1067.4 891 60.5
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 1.0e-309 1066.6 818 62.8
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 2.1e-307 1058.9 862 62.5
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 8.0e-307 1057.0 816 62.5
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.4e-306 1056.2 819 63.4
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 1.5e-305 1052.7 902 59.1
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 3.7e-304 1048.1 700 72.7
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 1.7e-301 1039.3 802 63.3
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 1.1e-300 1036.6 824 63.1
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 1.1e-300 1036.6 820 61.5
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 1.8e-298 1029.2 812 63.3
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 3.0e-298 1028.5 822 62.3
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 1.2e-297 1026.5 782 63.9
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 3.5e-294 1015.0 831 60.3
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 3.2e-292 1008.4 833 60.6
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.6e-291 1006.1 839 60.1
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 2.7e-291 1005.4 817 60.8
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 2.9e-285 985.3 738 64.1
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 3.6e-283 978.4 834 58.0
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 2.3e-282 975.7 825 60.0
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 4.1e-279 964.9 641 71.8
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 2.7e-278 962.2 701 68.3
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 2.3e-274 949.1 808 58.0
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 5.8e-273 944.5 837 56.2
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 2.9e-272 942.2 701 66.9
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 2.3e-269 932.6 859 57.2
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 2.0e-257 892.9 784 59.3
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 3.6e-251 872.1 658 66.1
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 2.1e-238 829.7 855 49.9
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 7.3e-236 821.2 862 48.5
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 3.1e-234 815.8 686 62.4
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 3.2e-231 805.8 841 47.9
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 2.5e-223 779.6 749 52.1
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.7e-195 687.2 751 49.3
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 5.5e-191 672.2 583 52.7
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 2.3e-181 640.2 473 65.5
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 2.3e-173 613.6 481 63.4
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 3.9e-160 569.7 706 43.3
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 3.2e-154 550.1 811 39.5
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.6e-150 537.7 546 53.5
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.6e-113 414.8 301 67.8
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.0e-112 412.1 382 54.5
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 9.3e-106 389.0 344 58.7
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 9.3e-106 389.0 300 65.0
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 5.7e-95 353.2 244 68.4
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.3e-91 342.0 246 63.4
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.2e-89 335.5 199 76.4
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 6.1e-89 333.2 188 79.8
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 3.0e-88 330.9 186 80.1
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 6.7e-80 303.1 217 60.4
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 9.7e-79 299.3 417 37.9
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 1.7e-75 288.5 202 63.9
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 5.6e-50 203.8 147 61.2
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 2.0e-44 185.3 131 59.5
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 7.8e-28 130.2 177 46.3
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 3.4e-23 114.8 163 38.0
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 2.7e-12 78.6 108 46.3
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 8.1e-09 67.0 94 45.7
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 5.3e-08 64.3 48 66.7
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 1.5e-07 62.8 186 30.6


User provided reference genes

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