Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 1.6e-52 209.1 104 100.0
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 5.6e-50 200.7 104 94.2
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 2.5e-42 175.3 104 83.7
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 5.3e-40 167.5 104 77.9
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 3.2e-29 131.7 96 63.5
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 9.3e-29 130.2 104 63.5
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 3.5e-28 128.3 82 70.7
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 3.5e-28 128.3 96 66.7
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 4.6e-28 127.9 87 71.3
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 6.0e-28 127.5 104 63.5
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 7.9e-28 127.1 83 73.5
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 7.9e-28 127.1 83 72.3
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 1.0e-27 126.7 104 62.5
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.3e-27 126.3 104 58.7
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 1.3e-27 126.3 104 62.5
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 1.8e-27 125.9 93 64.5
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 1.8e-27 125.9 88 68.2
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 2.3e-27 125.6 103 61.2
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 3.0e-27 125.2 101 59.4
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 3.0e-27 125.2 82 70.7
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 3.0e-27 125.2 95 65.3
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 3.9e-27 124.8 102 61.8
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 5.1e-27 124.4 88 67.0
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 6.7e-27 124.0 82 69.5
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 6.7e-27 124.0 98 61.2
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 8.7e-27 123.6 82 70.7
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 8.7e-27 123.6 104 57.7
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 8.7e-27 123.6 104 57.7
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 8.7e-27 123.6 82 70.7
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 8.7e-27 123.6 81 69.1
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 8.7e-27 123.6 103 61.2
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 1.1e-26 123.2 82 70.7
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.1e-26 123.2 104 61.5
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 1.1e-26 123.2 103 63.1
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.5e-26 122.9 104 56.7
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 1.5e-26 122.9 95 65.3
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 1.9e-26 122.5 96 60.4
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 1.9e-26 122.5 79 69.6
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 2.5e-26 122.1 82 70.7
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 2.5e-26 122.1 82 70.7
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 2.5e-26 122.1 82 70.7
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 2.5e-26 122.1 82 68.3
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 3.3e-26 121.7 82 69.5
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 3.3e-26 121.7 81 69.1
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 4.3e-26 121.3 91 64.8
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 4.3e-26 121.3 82 69.5
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 4.3e-26 121.3 89 61.8
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 5.7e-26 120.9 104 55.8
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 5.7e-26 120.9 82 70.7
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 7.4e-26 120.6 82 69.5
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 7.4e-26 120.6 103 60.2
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 7.4e-26 120.6 85 65.9
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 7.4e-26 120.6 103 62.1
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 7.4e-26 120.6 82 69.5
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 9.6e-26 120.2 84 66.7
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 9.6e-26 120.2 89 64.0
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 9.6e-26 120.2 103 58.3
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 9.6e-26 120.2 103 58.3
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 9.6e-26 120.2 103 58.3
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 1.3e-25 119.8 93 59.1
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.3e-25 119.8 82 68.3
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 1.3e-25 119.8 81 70.4
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 1.3e-25 119.8 101 56.4
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 1.3e-25 119.8 82 67.1
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 1.3e-25 119.8 103 60.2
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.3e-25 119.8 103 58.3
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 1.6e-25 119.4 82 67.1
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 1.6e-25 119.4 82 67.1
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 1.6e-25 119.4 82 67.1
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 1.6e-25 119.4 82 67.1
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 1.6e-25 119.4 82 67.1
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 1.6e-25 119.4 82 68.3
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 2.1e-25 119.0 91 62.6
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 2.1e-25 119.0 93 62.4
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 2.1e-25 119.0 90 63.3
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 2.8e-25 118.6 85 64.7
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 2.8e-25 118.6 94 61.7
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 2.8e-25 118.6 92 62.0
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 2.8e-25 118.6 83 68.7
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 2.8e-25 118.6 102 58.8
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 3.7e-25 118.2 95 60.0
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 4.8e-25 117.9 82 68.3
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 4.8e-25 117.9 90 63.3
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 6.2e-25 117.5 93 61.3
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 8.2e-25 117.1 82 65.9
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.4e-24 116.3 82 65.9
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 1.4e-24 116.3 79 67.1
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 1.8e-24 115.9 102 56.9
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 2.4e-24 115.5 82 64.6
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 2.4e-24 115.5 92 62.0
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 5.3e-24 114.4 96 59.4
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 6.9e-24 114.0 82 65.9
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 9.0e-24 113.6 89 59.6
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 1.2e-23 113.2 93 55.9
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 3.4e-23 111.7 82 61.0
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 1.0e-22 110.2 101 54.5
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 2.9e-22 108.6 90 61.1
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 3.8e-22 108.2 104 52.9
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.4e-21 106.3 106 50.0
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 5.5e-21 104.4 73 67.1
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 7.2e-21 104.0 109 46.8
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 9.3e-21 103.6 77 63.6
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 2.3e-19 99.0 93 51.6
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 2.5e-18 95.5 61 72.1
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 4.3e-18 94.7 103 51.5
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 4.3e-18 94.7 85 48.2
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.3e-17 93.2 89 44.9
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 2.8e-17 92.0 89 43.8
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 8.2e-17 90.5 82 48.8
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 5.0e-14 81.3 69 55.1
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 1.1e-13 80.1 84 45.2
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 2.0e-10 69.3 82 37.8
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 2.0e-10 69.3 85 41.2
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 9.7e-10 67.0 80 40.0


User provided reference genes

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