Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 3.3e-164 581.6 295 100.0
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 4.8e-147 524.6 295 90.5
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 6.6e-120 434.5 274 81.8
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 1.8e-109 399.8 276 79.0
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 4.9e-107 391.7 233 85.4
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 7.0e-106 387.9 284 74.3
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 1.7e-104 383.3 287 73.2
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 8.6e-104 380.9 232 82.3
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 7.3e-103 377.9 254 76.0
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 9.5e-103 377.5 231 83.5
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 2.1e-102 376.3 230 82.2
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 6.2e-102 374.8 254 75.2
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 8.0e-102 374.4 292 71.6
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 6.8e-101 371.3 237 79.7
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 8.9e-101 370.9 266 74.1
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 8.9e-101 370.9 237 79.7
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 1.5e-100 370.2 221 85.1
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 1.5e-100 370.2 287 67.6
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 2.0e-100 369.8 223 83.9
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 2.6e-100 369.4 237 79.3
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 3.4e-100 369.0 221 83.3
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 4.4e-100 368.6 234 80.8
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 9.8e-100 367.5 282 71.6
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.7e-99 366.7 219 85.8
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 2.9e-99 365.9 299 67.9
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 8.3e-99 364.4 271 70.8
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 1.9e-98 363.2 237 78.5
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 2.4e-98 362.8 227 80.6
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 9.2e-98 360.9 242 76.4
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 9.2e-98 360.9 222 81.1
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 1.2e-97 360.5 257 72.4
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 2.1e-97 359.8 286 68.9
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 2.7e-97 359.4 212 84.4
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 2.7e-97 359.4 250 74.4
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 2.7e-97 359.4 250 76.8
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 4.6e-97 358.6 291 69.8
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 1.7e-96 356.7 276 68.5
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 6.6e-96 354.8 272 71.0
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 8.6e-96 354.4 214 84.1
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 8.6e-96 354.4 282 67.4
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 1.9e-95 353.2 287 66.9
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 2.5e-95 352.8 219 82.2
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 3.3e-95 352.4 229 79.9
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 3.3e-95 352.4 216 82.4
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 9.5e-95 350.9 273 70.0
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 1.2e-94 350.5 287 67.2
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 1.6e-94 350.1 223 82.5
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 3.6e-94 349.0 214 80.8
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 3.6e-94 349.0 214 80.8
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 3.6e-94 349.0 272 70.2
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 4.7e-94 348.6 219 80.4
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 4.7e-94 348.6 284 67.6
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 8.1e-94 347.8 216 81.5
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 8.1e-94 347.8 250 72.8
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 1.8e-93 346.7 265 70.6
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 3.1e-93 345.9 214 80.4
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 3.1e-93 345.9 216 81.5
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 4.0e-93 345.5 219 78.5
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 6.8e-93 344.7 222 79.7
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 6.8e-93 344.7 237 75.5
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 6.8e-93 344.7 212 79.2
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 8.9e-93 344.4 220 80.5
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 1.5e-92 343.6 223 78.9
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 4.4e-92 342.0 224 79.0
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 4.4e-92 342.0 253 72.3
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 4.4e-92 342.0 248 70.6
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 5.8e-92 341.7 220 79.5
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 7.5e-92 341.3 224 78.6
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 7.5e-92 341.3 224 78.6
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 7.5e-92 341.3 214 79.4
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 9.9e-92 340.9 223 78.9
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 1.3e-91 340.5 224 79.0
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 1.3e-91 340.5 226 77.4
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 3.7e-91 339.0 267 68.2
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 3.2e-90 335.9 212 79.2
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 4.1e-90 335.5 223 78.9
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 5.4e-90 335.1 213 79.8
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 6.0e-89 331.6 237 73.8
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 6.0e-89 331.6 237 73.8
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 1.3e-88 330.5 233 74.2
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 2.5e-87 326.2 244 69.7
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 3.6e-86 322.4 196 82.1
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 8.9e-85 317.8 183 83.1
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 2.0e-84 316.6 323 57.0
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 4.4e-84 315.5 207 73.9
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 5.8e-84 315.1 259 68.3
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 9.9e-84 314.3 214 75.7
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 2.2e-83 313.2 183 82.0
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 3.8e-83 312.4 173 89.0
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 1.6e-81 307.0 208 75.5
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 1.7e-80 303.5 170 88.2
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 4.3e-79 298.9 237 69.6
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 2.4e-77 293.1 251 64.5
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 4.0e-77 292.4 263 62.0
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 6.9e-77 291.6 219 69.4
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 4.4e-76 288.9 213 67.6
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 3.8e-75 285.8 222 71.6
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 1.9e-74 283.5 225 64.9
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 3.2e-74 282.7 245 64.9
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 5.4e-74 282.0 199 71.4
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 2.1e-73 280.0 195 70.3
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 3.5e-73 279.3 224 66.5
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 1.9e-71 273.5 205 69.8
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 9.0e-69 264.6 166 81.9
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 9.9e-68 261.2 192 64.6
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 1.4e-61 240.7 223 61.9
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 1.4e-53 214.2 121 85.1
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 3.8e-51 206.1 133 79.7
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 2.2e-46 190.3 197 50.3
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 8.2e-46 188.3 120 81.7
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 3.1e-45 186.4 237 51.9
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 4.1e-45 186.0 121 79.3
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 2.2e-43 180.3 217 44.2
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 5.0e-43 179.1 195 51.8
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 1.1e-42 177.9 180 59.4
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 2.5e-39 166.8 97 83.5
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 1.7e-38 164.1 97 82.5
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 5.5e-34 149.1 291 40.2
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 3.0e-32 143.3 78 87.2
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 2.2e-30 137.1 201 46.3
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 6.3e-30 135.6 96 74.0
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 7.0e-29 132.1 80 78.8
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.2e-28 131.3 78 82.1
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 9.1e-21 105.1 71 73.2
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 1.1e-18 98.2 52 90.4
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 5.5e-18 95.9 79 68.4
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.2e-17 94.7 137 51.1
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 2.3e-16 90.5 50 86.0
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 3.0e-16 90.1 51 84.3
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 5.9e-12 75.9 48 75.0
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 1.7e-11 74.3 55 65.5
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 1.2e-09 68.2 47 66.0
VMungo0464G0819 Vigna mungo HOM05D006042 ORTHO05D007658 6.8e-08 62.4 47 63.8
Cpa.g.sc179.24 Carica papaya HOM05D006042 ORTHO05D007658 4.8e-06 56.2 32 84.4
unitig_0.g10 Utricularia gibba HOM05D006042 ORTHO05D007658 4.8e-06 56.2 50 60.0


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