Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 8.4e-79 297.0 151 100.0
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 3.2e-62 241.9 136 89.7
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 3.5e-61 238.4 128 89.1
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 1.1e-57 226.9 128 85.2
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 5.3e-57 224.6 127 85.0
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.2e-56 223.4 127 85.0
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.5e-56 223.0 127 83.5
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 2.0e-56 222.6 127 83.5
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 2.6e-56 222.2 128 83.6
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 9.9e-56 220.3 128 82.0
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 1.7e-55 219.5 128 81.2
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 2.9e-55 218.8 128 81.2
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.8e-55 218.4 128 81.2
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 6.4e-55 217.6 128 80.5
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 8.4e-55 217.2 128 81.2
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 1.9e-54 216.1 128 82.8
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 5.5e-54 214.5 128 79.7
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 7.1e-54 214.2 128 79.7
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 2.1e-53 212.6 127 81.9
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 3.5e-53 211.8 128 78.1
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 4.6e-53 211.5 128 78.9
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 1.0e-52 210.3 128 78.9
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 1.0e-52 210.3 127 77.2
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 3.9e-52 208.4 128 76.6
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 6.7e-52 207.6 128 78.1
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-51 206.8 128 76.6
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-51 206.8 128 76.6
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 1.1e-51 206.8 127 79.5
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 1.9e-51 206.1 128 75.8
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 1.9e-51 206.1 128 77.3
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 4.3e-51 204.9 122 78.7
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 7.4e-51 204.1 128 75.0
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 7.4e-51 204.1 128 75.0
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 7.4e-51 204.1 128 75.8
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 7.4e-51 204.1 128 75.8
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 7.4e-51 204.1 128 75.0
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 9.6e-51 203.8 127 75.6
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 9.6e-51 203.8 126 74.6
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 1.3e-50 203.4 127 75.6
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 1.6e-50 203.0 128 75.8
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 2.8e-50 202.2 127 75.6
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.8e-50 202.2 120 80.0
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 3.7e-50 201.8 120 79.2
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 3.7e-50 201.8 120 79.2
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.7e-50 201.8 128 75.0
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 3.7e-50 201.8 128 75.0
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 4.8e-50 201.4 128 74.2
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 8.1e-50 200.7 128 72.7
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 8.1e-50 200.7 128 75.8
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 1.1e-49 200.3 127 74.0
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 1.8e-49 199.5 128 74.2
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 4.0e-49 198.4 128 75.0
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 6.9e-49 197.6 127 74.8
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 1.2e-48 196.8 127 72.4
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 1.5e-48 196.4 120 76.7
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 1.5e-48 196.4 127 71.7
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 2.6e-48 195.7 127 72.4
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 5.8e-48 194.5 121 74.4
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 7.6e-48 194.1 127 71.7
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 7.6e-48 194.1 125 75.2
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 7.6e-48 194.1 128 71.1
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 1.0e-47 193.7 128 71.9
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.3e-47 193.4 119 75.6
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.3e-47 193.4 127 71.7
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 1.7e-47 193.0 125 74.4
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 1.7e-47 193.0 125 74.4
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 1.7e-47 193.0 125 74.4
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 1.7e-47 193.0 126 73.0
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 1.7e-47 193.0 124 74.2
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 2.9e-47 192.2 125 73.6
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 3.8e-47 191.8 127 70.9
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 3.8e-47 191.8 125 72.8
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 3.8e-47 191.8 125 72.8
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 4.9e-47 191.4 125 73.6
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 4.9e-47 191.4 125 73.6
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 6.5e-47 191.0 126 73.0
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 1.9e-46 189.5 125 72.8
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 1.9e-46 189.5 125 72.0
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 2.5e-46 189.1 120 75.0
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 2.5e-46 189.1 128 69.5
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 4.2e-46 188.3 126 72.2
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 7.1e-46 187.6 125 71.2
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 9.3e-46 187.2 124 71.8
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 9.3e-46 187.2 127 67.7
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 1.2e-45 186.8 145 62.8
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 1.2e-45 186.8 128 68.0
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.6e-45 186.4 128 72.7
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 2.1e-45 186.0 127 70.1
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 2.7e-45 185.7 134 69.4
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 2.7e-45 185.7 134 69.4
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 2.7e-45 185.7 134 69.4
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 2.7e-45 185.7 134 69.4
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 2.7e-45 185.7 127 68.5
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 4.6e-45 184.9 135 68.9
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 4.6e-45 184.9 127 68.5
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 7.9e-45 184.1 134 68.7
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 1.0e-44 183.7 138 67.4
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 1.0e-44 183.7 123 72.4
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 1.0e-44 183.7 128 68.8
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 1.3e-44 183.3 123 70.7
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 5.1e-44 181.4 129 69.0
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 1.1e-43 180.3 123 69.9
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 1.5e-43 179.9 123 69.9
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 1.5e-43 179.9 127 68.5
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.5e-43 179.9 127 63.8
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 7.4e-43 177.6 152 58.6
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 1.3e-42 176.8 128 68.8
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 4.1e-41 171.8 167 53.9
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 2.9e-39 165.6 104 77.9
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 5.0e-39 164.9 128 62.5
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 3.2e-38 162.2 127 63.0
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 7.2e-38 161.0 131 66.4
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.6e-37 159.8 127 63.0
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 9.7e-35 150.6 89 83.1
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 2.2e-34 149.4 127 59.1
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 6.3e-34 147.9 127 58.3
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 3.1e-33 145.6 125 56.8
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 5.3e-33 144.8 127 56.7
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 5.9e-32 141.4 76 93.4
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 1.6e-29 133.3 120 54.2
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.1e-29 132.9 91 68.1
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 4.4e-27 125.2 75 80.0
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 2.8e-26 122.5 71 81.7
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.7e-26 122.1 75 78.7
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 9.1e-25 117.5 71 80.3
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 9.1e-25 117.5 72 75.0
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 7.7e-24 114.4 57 94.7
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 7.7e-24 114.4 57 94.7
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 3.8e-23 112.1 71 70.4
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 5.0e-23 111.7 72 75.0
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 2.7e-21 105.9 70 71.4
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 2.3e-20 102.8 114 43.9
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 3.0e-20 102.4 77 63.6
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 3.0e-20 102.4 57 82.5
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 8.8e-20 100.9 72 63.9
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 1.5e-19 100.1 56 83.9
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 5.7e-19 98.2 58 77.6
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 1.7e-18 96.7 78 62.8
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 1.2e-16 90.5 77 61.0
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.1e-14 84.0 53 75.5
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 1.5e-14 83.6 60 66.7
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 1.5e-14 83.6 56 67.9
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 1.6e-13 80.1 116 37.1
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.8e-12 76.6 74 47.3
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 2.0e-11 73.2 58 58.6
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 7.0e-09 64.7 74 40.5
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 7.7e-08 61.2 76 35.5
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 1.3e-07 60.5 76 31.6


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