Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 7.9e-118 427.2 222 100.0
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 4.8e-107 391.3 226 91.6
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 1.0e-101 373.6 226 87.6
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 3.0e-85 318.9 234 76.1
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 3.2e-79 298.9 227 76.2
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 9.1e-66 254.2 168 81.0
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 8.0e-54 214.5 225 59.1
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.2e-52 210.7 227 55.5
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 5.7e-52 208.4 221 56.6
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 2.2e-51 206.5 231 54.1
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 2.9e-51 206.1 227 53.7
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 2.9e-51 206.1 225 56.0
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 3.7e-51 205.7 227 57.3
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 4.9e-51 205.3 227 53.7
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 3.2e-50 202.6 228 53.5
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 5.4e-50 201.8 234 53.0
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 9.2e-50 201.1 226 55.3
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 3.5e-49 199.1 220 55.0
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 5.9e-49 198.4 236 53.8
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 1.5e-47 193.7 226 50.0
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 1.5e-47 193.7 228 53.5
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 1.9e-47 193.4 228 53.5
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 9.5e-47 191.0 227 52.4
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.2e-46 190.7 227 52.0
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 1.2e-46 190.7 227 52.0
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.2e-46 190.7 225 50.2
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 1.6e-46 190.3 218 51.4
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 2.1e-46 189.9 228 51.3
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.0e-45 187.6 224 52.2
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.0e-45 187.6 236 49.6
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.4e-45 187.2 227 51.1
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 1.4e-45 187.2 229 48.5
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 2.3e-45 186.4 226 50.9
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 3.1e-45 186.0 228 50.9
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 3.1e-45 186.0 223 51.6
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 1.5e-44 183.7 224 50.9
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 2.6e-44 183.0 229 47.6
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 2.6e-44 183.0 248 47.2
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 3.4e-44 182.6 223 49.8
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 7.5e-44 181.4 219 50.2
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 9.8e-44 181.0 217 50.2
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 1.7e-43 180.3 224 49.6
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 1.7e-43 180.3 227 48.5
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 2.9e-43 179.5 225 47.1
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 8.3e-43 177.9 222 50.0
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 1.1e-42 177.6 226 48.7
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 3.2e-42 176.0 222 45.9
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 3.2e-42 176.0 223 50.7
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 1.2e-41 174.1 224 46.9
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 1.2e-41 174.1 233 48.5
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 1.6e-41 173.7 226 49.6
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 2.7e-41 172.9 221 45.7
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 3.5e-41 172.6 228 49.6
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 4.6e-41 172.2 230 49.1
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 6.0e-41 171.8 277 43.3
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 6.0e-41 171.8 234 47.4
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 7.8e-41 171.4 224 46.0
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 7.8e-41 171.4 221 43.4
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 7.8e-41 171.4 219 50.2
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 7.8e-41 171.4 228 46.5
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 1.3e-40 170.6 224 48.7
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 1.7e-40 170.2 223 48.4
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 1.7e-40 170.2 226 49.6
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 2.3e-40 169.9 227 45.4
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.3e-40 169.9 230 49.6
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 3.9e-40 169.1 229 44.5
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 5.0e-40 168.7 230 49.1
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 6.6e-40 168.3 222 48.2
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 1.1e-39 167.5 222 44.6
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 1.1e-39 167.5 221 46.6
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.5e-39 167.2 230 47.0
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 1.9e-39 166.8 172 54.1
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 2.5e-39 166.4 218 45.4
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.5e-39 166.4 222 48.6
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 2.5e-39 166.4 225 47.6
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 5.6e-39 165.2 226 43.8
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 2.1e-38 163.3 206 51.0
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 3.6e-38 162.5 221 46.6
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 1.2e-36 157.5 225 44.4
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 3.4e-36 156.0 231 45.0
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 9.8e-36 154.5 229 46.3
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 9.8e-36 154.5 231 44.2
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 2.2e-35 153.3 225 43.6
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 2.2e-35 153.3 236 39.8
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 2.2e-35 153.3 163 52.1
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 2.9e-35 152.9 229 45.4
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 8.3e-35 151.4 226 45.1
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 1.9e-34 150.2 232 43.1
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 3.5e-33 146.0 231 42.9
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 7.8e-33 144.8 226 42.5
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 3.3e-31 139.4 228 43.9
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 1.6e-30 137.1 226 42.0
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 2.1e-30 136.7 230 42.6
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 3.6e-30 136.0 228 42.1
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 3.6e-30 136.0 218 42.2
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 8.1e-30 134.8 222 43.2
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 1.2e-28 131.0 130 58.5
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 1.7e-27 127.1 232 39.2
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 2.2e-27 126.7 231 38.5
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 2.9e-27 126.3 236 39.0
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.6e-25 120.6 139 48.2
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 6.0e-25 118.6 224 37.5
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.4e-21 107.5 177 41.2
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.5e-20 104.0 327 31.2
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 2.6e-20 103.2 136 48.5
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 2.2e-19 100.1 127 44.9
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 3.8e-19 99.4 126 45.2
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.5e-15 86.7 116 48.3
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.6e-14 84.0 237 32.1
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 3.1e-13 79.7 53 67.9
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 3.4e-12 76.3 240 30.4
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 2.9e-11 73.2 227 31.3
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 8.4e-11 71.6 98 43.9
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 3.5e-09 66.2 91 42.9
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 7.9e-09 65.1 78 47.4
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 8.7e-08 61.6 107 36.4
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 1.9e-07 60.5 114 43.9
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 6.2e-06 55.5 50 56.0


User provided reference genes

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