Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 3.6e-82 308.1 152 100.0
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 6.3e-42 174.5 133 68.4
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 1.7e-34 149.8 138 65.2
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 6.8e-28 127.9 157 45.2
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 2.0e-27 126.3 148 43.2
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 1.7e-26 123.2 152 45.4
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 4.8e-26 121.7 145 46.9
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.2e-23 112.8 149 40.9
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 5.0e-23 111.7 146 40.4
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 6.5e-23 111.3 151 41.7
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 6.5e-23 111.3 148 42.6
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 5.5e-22 108.2 157 38.9
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 2.1e-21 106.3 140 41.4
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 2.1e-21 106.3 148 43.9
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 4.7e-21 105.1 139 39.6
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 1.4e-20 103.6 146 43.2
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 2.3e-20 102.8 158 39.2
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 4.0e-20 102.1 152 44.1
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 4.0e-20 102.1 159 37.7
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 4.0e-20 102.1 158 41.8
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 1.5e-19 100.1 161 41.6
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 2.6e-19 99.4 127 40.9
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 9.8e-19 97.4 167 37.7
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 4.9e-18 95.1 146 39.7
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 6.3e-18 94.7 160 36.9
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.4e-17 92.8 171 37.4
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 4.1e-17 92.0 159 37.7
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 4.1e-17 92.0 145 40.0
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 4.1e-17 92.0 166 36.1
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 5.4e-17 91.7 166 36.1
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 7.0e-17 91.3 157 37.6
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 1.6e-16 90.1 157 38.2
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.6e-16 90.1 152 37.5
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.6e-16 90.1 157 38.2
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 4.5e-16 88.6 156 37.2
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 5.9e-16 88.2 154 37.0
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 7.8e-16 87.8 153 37.9
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 7.8e-16 87.8 144 32.6
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.3e-15 87.0 154 37.0
MELO3C012262.2 Cucumis melo HOM05D007903 ORTHO05D009925 1.3e-15 87.0 52 84.6
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 2.3e-15 86.3 145 37.2
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 2.9e-15 85.9 139 36.0
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 3.8e-15 85.5 150 42.7
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 1.1e-14 84.0 160 33.8
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 1.1e-14 84.0 145 44.1
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 3.3e-14 82.4 173 36.4
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 3.3e-14 82.4 151 37.1
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 4.3e-14 82.0 149 37.6
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 9.5e-14 80.9 166 33.1
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 1.2e-13 80.5 152 32.9
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 1.2e-13 80.5 130 37.7
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 4.7e-13 78.6 168 36.3
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 8.0e-13 77.8 134 38.1
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.3e-12 76.3 147 34.7
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 4.0e-12 75.5 143 38.5
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 8.9e-12 74.3 137 37.2
TWI79G1550 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 3.4e-11 72.4 139 39.6
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 7.5e-11 71.2 143 37.1
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 1.3e-10 70.5 146 36.3
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 2.9e-10 69.3 144 33.3
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 2.9e-10 69.3 147 36.1
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 8.3e-10 67.8 140 36.4
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 4.1e-09 65.5 136 36.8
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 5.4e-09 65.1 145 33.8
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 5.4e-09 65.1 138 32.6
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 9.2e-09 64.3 142 34.5
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 9.2e-09 64.3 142 34.5
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 9.2e-09 64.3 142 34.5
SalBow8G0258 Salvia bowleyana HOM05D065226 ORTHO05D009925 2.0e-08 63.2 156 31.4
SalBow8G1517 Salvia bowleyana HOM05D065226 ORTHO05D009925 2.0e-08 63.2 156 31.4
HPP92_004796 Vanilla planifolia HOM05D007903 ORTHO05D009925 2.0e-08 63.2 137 35.0
Lsat_1_v5_gn_3_57941 Lactuca sativa HOM05D007903 ORTHO05D009925 5.9e-08 61.6 70 45.7
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 8.6e-07 57.8 149 30.9
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 2.5e-06 56.2 164 32.3
Os01g0133200 Oryza sativa ssp. japonica HOM05D007903 ORTHO05D009925 5.6e-06 55.1 165 26.7
EL10Ac6g14355 Beta vulgaris HOM05D007903 ORTHO05D009925 7.3e-06 54.7 140 33.6


User provided reference genes

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