Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 1.2e-239 832.8 414 100.0
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 1.5e-226 789.3 414 94.9
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 2.8e-217 758.4 412 91.0
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 1.9e-205 719.2 414 84.5
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 3.1e-200 701.8 404 84.7
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 1.4e-168 596.7 418 70.3
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 9.1e-168 594.0 415 70.1
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 2.6e-167 592.4 410 68.8
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 1.0e-166 590.5 402 70.4
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 1.3e-166 590.1 418 68.2
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 5.0e-166 588.2 417 67.4
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 2.5e-165 585.9 410 67.6
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 2.5e-165 585.9 418 68.7
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 4.2e-165 585.1 416 68.5
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.2e-164 583.6 400 70.2
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 3.6e-164 582.0 411 68.1
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 4.7e-164 581.6 425 68.5
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 7.9e-164 580.9 410 68.3
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 3.9e-163 578.6 414 67.4
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 4.4e-162 575.1 421 68.6
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 4.4e-162 575.1 414 67.9
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.1e-160 570.5 411 68.1
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 1.8e-160 569.7 405 68.9
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 5.3e-160 568.2 403 67.7
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.2e-159 567.0 434 64.7
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.6e-159 566.6 435 64.8
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 7.7e-159 564.3 405 67.7
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 1.0e-158 563.9 413 66.3
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 1.3e-158 563.5 419 66.6
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 1.7e-158 563.1 410 67.3
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.7e-158 563.1 417 66.9
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 5.0e-158 561.6 415 67.0
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 5.0e-158 561.6 402 67.4
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 8.5e-158 560.8 401 68.6
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 8.5e-158 560.8 427 63.7
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 1.5e-157 560.1 419 66.3
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 1.6e-156 556.6 399 68.7
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.6e-156 556.6 413 65.6
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 2.7e-156 555.8 404 66.1
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 2.7e-156 555.8 403 67.0
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 8.0e-156 554.3 417 66.7
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 1.4e-155 553.5 394 68.3
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 3.0e-155 552.4 416 64.2
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 6.7e-155 551.2 399 68.2
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 6.7e-155 551.2 410 65.9
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 1.1e-154 550.4 414 65.9
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 4.4e-154 548.5 411 65.0
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 9.7e-154 547.4 430 64.2
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 1.7e-153 546.6 421 62.9
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 5.3e-152 541.6 404 65.6
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 1.6e-151 540.0 407 65.4
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 6.5e-150 534.6 413 63.4
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 1.5e-149 533.5 407 62.7
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 1.2e-148 530.4 399 65.2
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 8.0e-148 527.7 407 62.9
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 1.8e-147 526.6 405 63.7
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 1.5e-146 523.5 405 61.2
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 3.4e-146 522.3 402 63.2
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 1.3e-145 520.4 418 61.7
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 3.7e-145 518.8 417 61.6
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 8.3e-145 517.7 403 64.8
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 8.3e-145 517.7 410 62.4
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 1.4e-144 516.9 406 63.1
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 3.1e-144 515.8 417 60.9
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 1.0e-142 510.8 414 61.1
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 2.2e-142 509.6 405 62.5
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 4.2e-141 505.4 434 59.7
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 2.7e-140 502.7 414 61.1
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 4.9e-137 491.9 402 59.7
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 3.5e-135 485.7 410 58.5
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 5.7e-130 468.4 404 55.4
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 3.7e-121 439.1 324 66.4
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.1e-112 411.0 283 69.6
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.9e-112 410.2 298 67.4
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 3.9e-110 402.5 394 50.3
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 5.6e-109 398.7 431 46.9
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 1.1e-107 394.4 337 59.1
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 4.4e-106 389.0 294 66.0
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 4.4e-106 389.0 419 50.1
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.9e-105 386.3 380 50.5
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 3.2e-104 382.9 400 49.2
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 3.5e-103 379.4 422 46.9
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 9.9e-98 361.3 310 61.0
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.6e-95 354.0 442 41.9
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 4.2e-88 329.3 444 40.8
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.8e-84 316.6 456 38.8
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 2.8e-76 290.0 259 57.1
Nn4g23575 Nelumbo nucifera HOM05D006847 ORTHO05D008685 4.8e-68 262.7 149 78.5
CSS0031083 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 5.5e-64 249.2 291 49.8
Cpa.g.c44692 Carica papaya HOM05D006847 ORTHO05D008685 5.5e-64 249.2 141 80.9
Medtr8g069545 Medicago truncatula HOM05D006847 ORTHO05D008685 8.7e-62 241.9 153 71.9
Psat2g097440 Pisum sativum HOM05D006847 ORTHO05D008685 1.1e-61 241.5 141 77.3
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 1.8e-59 234.2 264 48.5
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 2.0e-58 230.7 247 51.4
SMO198G0052 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 7.7e-58 228.8 166 59.0
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 3.3e-53 213.4 256 48.4
Sabra10G0104800 Salix brachista HOM05D006847 ORTHO05D008685 2.5e-48 197.2 261 43.7
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 1.5e-40 171.4 195 48.7
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 1.4e-38 164.9 111 73.0
Pp3c16_11950 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.4e-35 154.1 143 50.3
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 3.5e-34 150.2 141 52.5
Solyc05g010630.4 Solanum lycopersicum HOM05D006847 ORTHO05D008685 5.9e-34 149.4 104 66.3
AagrBONN_evm.TU.Sc2ySwM_117.3731 Anthoceros agrestis HOM05D006847 ORTHO05D008685 1.4e-30 138.3 109 56.9
arahy.Tifrunner.gnm1.ann1.UQ0TL8 Arachis hypogaea HOM05D006847 ORTHO05D008685 1.8e-22 111.3 94 57.4
AagrBONN_evm.TU.Sc2ySwM_117.3730 Anthoceros agrestis HOM05D006847 ORTHO05D008685 1.7e-20 104.8 214 30.8
Sabra10G0104900 Salix brachista HOM05D006847 ORTHO05D008685 6.3e-20 102.8 103 54.4
Cre06.g263550 Chlamydomonas reinhardtii HOM05D006847 ORTHO05D008685 1.1e-19 102.1 187 34.2
Actinidia31922 Actinidia chinensis HOM05D006847 ORTHO05D008685 5.4e-19 99.8 57 82.5
arahy.Tifrunner.gnm1.ann1.JA47JZ Arachis hypogaea HOM05D006847 ORTHO05D008685 7.0e-19 99.4 56 75.0
SMO143G0192 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 3.8e-17 93.6 110 40.0
SMO143G0243 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 3.8e-17 93.6 105 41.9
SMO186G0008 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 4.3e-16 90.1 110 40.0
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.4e-14 85.1 110 39.1
MCO10G065 Micromonas commoda HOM05D006847 ORTHO05D008685 2.6e-13 80.9 141 37.6
Solyc01g081280.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 7.5e-13 79.3 51 66.7
CAN.G992.5 Capsicum annuum HOM05D006847 ORTHO05D008685 1.7e-12 78.2 52 69.2
Eucgr.K03198 Eucalyptus grandis HOM05D007024 ORTHO05D008865 5.0e-09 66.6 168 28.6
Manes.08G001700 Manihot esculenta HOM05D007024 ORTHO05D008865 6.6e-09 66.2 175 27.4
Potri.006G133100 Populus trichocarpa HOM05D007024 ORTHO05D008865 1.1e-08 65.5 168 27.4
THA.LOC104805324 Tarenaya hassleriana HOM05D007024 ORTHO05D008865 1.9e-08 64.7 168 26.2
Sabra06G0104600 Salix brachista HOM05D007024 ORTHO05D008865 4.3e-08 63.5 168 27.4
Aa31LG5G22570 Aethionema arabicum HOM05D007024 ORTHO05D008865 7.3e-08 62.8 168 27.4
Mapoly0013s0125 Marchantia polymorpha HOM05D016606 ORTHO05D018318 7.3e-08 62.8 186 24.7
CARHR132350 Cardamine hirsuta HOM05D007024 ORTHO05D008865 9.5e-08 62.4 168 26.8
Thhalv10017137m.g Eutrema salsugineum HOM05D007024 ORTHO05D008865 9.5e-08 62.4 168 27.4
Ciclev10013683m.g Citrus clementina HOM05D007024 ORTHO05D008865 1.2e-07 62.0 168 26.2
CSS0004845 Camellia sinensis var. sinensis HOM05D007024 ORTHO05D008865 2.1e-07 61.2 168 26.2
Lj1g0023744 Lotus japonicus HOM05D007024 ORTHO05D008865 2.1e-07 61.2 168 25.6
Dinv35695 Davidia involucrata HOM05D001458 ORTHO05D006787 8.0e-07 59.3 226 23.0
vmacro08688 Vaccinium macrocarpon HOM05D007024 ORTHO05D008865 4.0e-06 57.0 168 25.0
AagrBONN_evm.TU.Sc2ySwM_228.4582 Anthoceros agrestis HOM05D016606 ORTHO05D018318 6.8e-06 56.2 164 28.0
Mapoly0154s0013 Marchantia polymorpha HOM05D007024 ORTHO05D008865 8.9e-06 55.8 170 26.5


User provided reference genes

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