Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 4.0e-102 374.8 191 100.0
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 2.9e-92 342.0 191 93.2
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 3.2e-83 312.0 184 87.0
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 5.2e-78 294.7 204 78.4
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 2.8e-63 245.7 192 69.3
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 3.6e-63 245.4 197 66.0
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 4.8e-63 245.0 195 67.7
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 6.9e-62 241.1 202 67.3
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.5e-61 240.0 197 67.5
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 6.0e-58 228.0 203 63.1
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 7.9e-58 227.6 194 66.5
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 7.9e-58 227.6 196 64.8
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 1.3e-57 226.9 202 62.9
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.8e-57 226.5 195 64.1
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 8.7e-57 224.2 224 58.0
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 1.9e-56 223.0 195 63.6
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 9.6e-56 220.7 197 63.5
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.3e-55 220.3 195 62.6
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 1.3e-55 220.3 195 60.5
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 1.3e-55 220.3 194 64.9
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.1e-55 219.5 194 63.4
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 2.1e-55 219.5 203 62.6
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 8.1e-55 217.6 198 63.6
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 3.1e-54 215.7 194 62.4
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 5.3e-54 214.9 194 62.4
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 1.2e-53 213.8 195 61.5
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 3.4e-53 212.2 194 63.4
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 4.5e-53 211.8 195 63.1
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 7.6e-53 211.1 189 63.5
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 7.6e-53 211.1 203 60.6
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.0e-52 210.7 203 60.1
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 1.0e-52 210.7 194 62.4
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 1.3e-52 210.3 208 58.2
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.2e-52 209.5 203 60.6
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 4.9e-52 208.4 194 61.9
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 1.1e-51 207.2 195 61.0
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 1.9e-51 206.5 196 58.7
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 3.2e-51 205.7 208 54.8
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 4.2e-51 205.3 204 56.4
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 4.2e-51 205.3 206 54.9
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 5.5e-51 204.9 206 55.3
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 7.1e-51 204.5 207 56.5
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 1.2e-50 203.8 197 60.4
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 2.7e-50 202.6 204 55.9
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 2.7e-50 202.6 204 55.9
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 7.9e-50 201.1 197 58.4
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 8.7e-49 197.6 196 59.7
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 1.1e-48 197.2 206 58.3
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 1.9e-48 196.4 206 51.9
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 2.5e-48 196.1 202 54.0
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 5.7e-48 194.9 144 69.4
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 1.3e-47 193.7 211 53.6
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.3e-47 193.7 144 69.4
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 1.3e-47 193.7 152 68.4
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.6e-47 193.4 203 52.7
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 2.1e-47 193.0 196 55.1
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 3.7e-47 192.2 196 56.1
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 1.4e-46 190.3 149 66.4
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 2.4e-46 189.5 198 55.1
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.4e-46 189.5 161 60.2
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 3.1e-46 189.1 221 52.5
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 9.0e-46 187.6 199 56.3
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 2.6e-45 186.0 214 52.8
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 4.5e-45 185.3 194 54.6
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 1.3e-44 183.7 211 52.6
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 8.5e-44 181.0 198 53.5
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 8.5e-44 181.0 206 51.9
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 1.4e-43 180.3 211 51.7
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.4e-43 180.3 211 51.7
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.9e-43 179.9 203 55.7
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 2.5e-43 179.5 198 53.0
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 2.5e-43 179.5 159 62.9
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 3.2e-43 179.1 193 53.9
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 9.3e-43 177.6 203 53.2
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 2.1e-42 176.4 210 50.0
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 7.9e-42 174.5 206 50.5
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.1e-40 170.6 202 51.0
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 4.3e-40 168.7 182 54.9
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 4.3e-40 168.7 226 46.5
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 1.1e-38 164.1 213 49.3
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 5.3e-38 161.8 214 46.3
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 9.1e-38 161.0 247 44.1
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 7.7e-37 157.9 213 46.5
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 1.0e-36 157.5 202 48.5
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 1.7e-36 156.8 198 48.5
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 2.2e-36 156.4 190 47.4
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 3.8e-36 155.6 220 45.5
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 2.5e-35 152.9 202 45.0
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 7.2e-35 151.4 226 43.8
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 1.2e-34 150.6 204 45.1
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 1.3e-31 140.6 144 50.7
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.5e-29 133.7 193 46.1
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 6.5e-28 128.3 192 40.6
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 8.5e-28 127.9 212 42.0
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 4.7e-26 122.1 193 41.5
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 7.9e-26 121.3 119 56.3
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 3.0e-25 119.4 140 48.6
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 3.9e-25 119.0 112 58.0
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 6.3e-23 111.7 112 57.1
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.7e-20 103.6 123 49.6
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 9.7e-16 87.8 93 49.5
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 7.0e-14 81.6 81 54.3
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 3.8e-12 75.9 88 52.3
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 1.7e-07 60.5 161 26.1


User provided reference genes

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