Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 2.3e-268 928.3 465 100.0
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 1.3e-247 859.4 464 91.8
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 3.6e-213 745.0 468 83.3
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 3.6e-197 691.8 464 74.4
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 1.5e-195 686.4 463 72.6
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 3.7e-194 681.8 465 72.3
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 6.3e-194 681.0 474 77.4
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 7.0e-193 677.6 451 75.2
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 2.7e-192 675.6 464 72.2
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 1.3e-191 673.3 450 73.1
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 2.9e-191 672.2 457 72.9
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 8.6e-191 670.6 464 72.2
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 3.3e-190 668.7 458 71.8
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 7.2e-190 667.5 459 69.7
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 1.6e-189 666.4 459 70.8
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 6.1e-189 664.5 462 72.7
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 3.0e-188 662.1 454 73.1
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 8.9e-188 660.6 464 70.3
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 1.5e-187 659.8 463 70.6
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 1.3e-186 656.8 461 70.3
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 3.2e-185 652.1 454 71.8
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 7.0e-185 651.0 456 69.5
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 1.6e-184 649.8 459 69.7
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 1.7e-183 646.4 463 68.7
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 5.0e-183 644.8 461 69.0
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 8.6e-183 644.0 454 69.6
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.5e-182 643.3 454 69.6
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 3.6e-181 638.6 465 67.5
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 4.0e-180 635.2 533 62.5
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 7.5e-179 630.9 462 68.0
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 1.4e-177 626.7 462 67.5
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 1.4e-177 626.7 462 67.5
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.4e-177 626.7 463 67.8
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 7.0e-177 624.4 456 67.5
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 2.7e-176 622.5 461 68.3
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 3.9e-175 618.6 461 66.6
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 6.6e-175 617.8 514 62.1
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 9.5e-174 614.0 476 65.3
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.2e-173 613.6 463 66.5
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 1.4e-172 610.1 463 66.7
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 3.1e-172 609.0 456 66.9
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 6.8e-172 607.8 433 70.4
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 1.2e-171 607.1 463 65.4
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 4.4e-171 605.1 464 64.7
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 4.4e-171 605.1 463 63.5
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 2.2e-170 602.8 445 66.3
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.7e-170 602.1 460 65.0
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 1.4e-169 600.1 453 64.2
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 1.2e-168 597.0 459 65.1
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.3e-167 593.6 456 65.1
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 5.6e-166 588.2 465 63.7
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 9.5e-166 587.4 556 56.7
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 2.1e-165 586.3 457 62.4
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 2.8e-165 585.9 453 63.4
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 8.1e-165 584.3 460 63.3
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 3.1e-164 582.4 449 64.1
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 5.2e-164 581.6 456 62.7
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 8.9e-164 580.9 458 63.3
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 1.7e-162 576.6 453 62.7
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 4.9e-162 575.1 445 62.9
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 1.1e-161 573.9 474 59.9
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 1.9e-161 573.2 451 62.3
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 4.1e-161 572.0 451 62.3
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 4.1e-161 572.0 451 62.3
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 5.4e-161 571.6 451 61.9
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.2e-160 570.5 423 66.0
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 1.6e-160 570.1 447 62.2
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 2.1e-160 569.7 453 62.0
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 6.0e-160 568.2 451 61.9
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.3e-159 567.0 451 61.6
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 1.7e-159 566.6 456 61.6
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 5.6e-158 561.6 453 61.4
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 2.1e-157 559.7 449 61.9
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 4.7e-157 558.5 453 59.8
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 5.2e-156 555.1 467 58.7
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 6.8e-156 554.7 453 59.8
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 6.8e-156 554.7 453 59.8
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 6.8e-156 554.7 448 60.7
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 8.9e-156 554.3 429 64.8
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 1.5e-155 553.5 453 59.6
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 2.6e-155 552.7 453 59.4
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 2.6e-155 552.7 397 68.8
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 4.4e-155 552.0 455 58.2
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 2.9e-154 549.3 453 59.6
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 2.9e-154 549.3 437 64.3
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 2.4e-153 546.2 397 68.3
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 2.4e-148 529.6 427 59.3
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 2.6e-147 526.2 383 67.6
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 4.2e-145 518.8 390 66.4
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 7.1e-145 518.1 462 56.5
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 6.6e-143 511.5 390 63.8
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 1.4e-137 493.8 396 62.1
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 8.4e-130 468.0 458 55.0
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.6e-123 446.4 335 65.1
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 8.2e-117 424.9 313 66.1
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 1.8e-116 423.7 310 69.0
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 2.2e-114 416.8 399 50.6
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 5.5e-113 412.1 308 64.6
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.0e-98 364.8 312 59.6
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 5.9e-91 339.0 266 64.3
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 5.9e-91 339.0 266 64.3
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 4.8e-85 319.3 454 41.0
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 4.3e-73 279.6 387 39.8
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 7.8e-67 258.8 209 62.7
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 5.0e-66 256.1 215 59.1
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 8.0e-64 248.8 183 67.8
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 7.3e-41 172.6 112 75.0
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 2.8e-24 117.5 95 62.1
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 2.0e-14 84.7 72 58.3
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 1.0e-13 82.4 72 56.9
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 6.7e-10 69.7 80 45.0


User provided reference genes

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