Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 8.7e-114 413.7 214 100.0
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 8.1e-104 380.6 217 92.6
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 2.5e-89 332.4 213 81.2
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 2.2e-85 319.3 215 79.5
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 4.8e-72 275.0 216 70.4
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 3.1e-71 272.3 201 73.1
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 7.7e-70 267.7 203 72.4
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 1.0e-69 267.3 211 69.2
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 1.0e-69 267.3 211 69.2
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 2.9e-69 265.8 202 69.3
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 3.8e-69 265.4 212 70.3
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 3.2e-68 262.3 215 68.4
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 3.2e-68 262.3 206 68.4
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 4.2e-68 261.9 219 68.0
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 1.2e-67 260.4 223 66.8
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 1.6e-67 260.0 204 71.6
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.1e-67 259.6 206 68.4
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 6.1e-67 258.1 203 69.0
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 6.1e-67 258.1 210 69.0
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.4e-66 256.9 204 69.1
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 3.0e-66 255.8 204 68.6
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 5.2e-66 255.0 203 68.0
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 6.7e-66 254.6 203 68.0
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 1.1e-65 253.8 203 67.5
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 1.5e-65 253.4 202 68.8
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 7.5e-65 251.1 203 67.5
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 9.7e-65 250.8 178 72.5
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 2.8e-64 249.2 166 77.7
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 8.2e-64 247.7 166 75.3
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 8.2e-64 247.7 191 71.7
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 3.1e-63 245.7 194 67.5
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 4.1e-63 245.4 205 67.3
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 9.1e-63 244.2 171 74.3
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.2e-62 243.8 164 75.0
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 1.6e-62 243.4 201 66.7
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 2.0e-62 243.0 171 73.7
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 5.9e-62 241.5 166 75.3
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 5.9e-62 241.5 166 75.3
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 5.9e-62 241.5 207 64.3
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 1.0e-61 240.7 215 61.9
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 1.3e-61 240.4 181 70.2
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 1.3e-61 240.4 166 74.7
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 1.7e-61 240.0 160 75.6
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 1.7e-61 240.0 168 74.4
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 2.9e-61 239.2 252 57.1
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 3.8e-61 238.8 225 61.3
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 5.0e-61 238.4 207 65.2
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 8.5e-61 237.7 203 65.5
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 1.9e-60 236.5 252 54.4
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 2.5e-60 236.1 209 63.2
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 2.5e-60 236.1 205 64.9
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 3.2e-60 235.7 200 64.5
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 5.5e-60 235.0 202 65.3
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 7.2e-60 234.6 192 66.7
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 2.7e-59 232.6 194 63.9
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 8.0e-59 231.1 214 61.2
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.8e-58 229.9 213 62.0
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 2.3e-58 229.6 140 82.9
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 3.0e-58 229.2 225 60.0
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 4.0e-58 228.8 156 75.0
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 4.0e-58 228.8 212 62.7
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 5.2e-58 228.4 226 59.7
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 6.8e-58 228.0 218 58.7
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 1.2e-57 227.3 201 63.2
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.5e-57 226.9 216 63.0
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 2.0e-57 226.5 230 58.7
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 3.4e-57 225.7 207 61.8
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 9.8e-57 224.2 269 51.3
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.3e-56 223.8 226 58.8
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 1.3e-56 223.8 203 60.6
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 3.7e-56 222.2 152 76.3
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 4.8e-56 221.9 191 66.5
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 3.1e-55 219.2 199 62.8
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 4.1e-55 218.8 210 58.6
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 4.1e-55 218.8 130 81.5
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 4.1e-55 218.8 216 56.5
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 2.7e-54 216.1 225 58.2
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 3.5e-54 215.7 216 57.4
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 3.5e-54 215.7 191 62.8
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 7.7e-54 214.5 206 59.2
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 7.7e-54 214.5 201 59.7
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 1.0e-53 214.2 210 57.6
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 1.0e-53 214.2 147 73.5
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 1.7e-53 213.4 153 71.2
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 1.7e-53 213.4 210 58.1
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 3.8e-53 212.2 150 71.3
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 5.0e-53 211.8 210 58.1
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 5.0e-53 211.8 210 58.1
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 6.5e-53 211.5 199 58.8
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 6.5e-53 211.5 210 57.6
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 6.5e-53 211.5 211 58.8
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 8.5e-53 211.1 211 57.3
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 1.1e-52 210.7 210 58.1
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 1.9e-52 209.9 209 57.4
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 1.9e-52 209.9 210 57.1
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 3.2e-52 209.1 163 64.4
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 3.2e-52 209.1 139 74.1
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 3.2e-52 209.1 195 63.1
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 5.5e-52 208.4 208 57.2
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 7.2e-52 208.0 210 57.1
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 9.4e-52 207.6 132 75.8
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 1.2e-51 207.2 185 63.2
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 1.6e-51 206.8 219 57.5
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 2.1e-51 206.5 129 77.5
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 2.3e-50 203.0 120 82.5
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 3.0e-50 202.6 133 69.9
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 4.0e-50 202.2 140 75.0
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 2.6e-49 199.5 143 68.5
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 3.4e-49 199.1 209 53.1
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 4.4e-49 198.7 203 56.7
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 5.7e-49 198.4 203 53.2
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.3e-48 197.2 281 46.6
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 1.3e-48 197.2 174 61.5
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 1.7e-48 196.8 147 67.3
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.7e-48 195.7 189 56.6
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 6.3e-48 194.9 185 62.2
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 8.3e-48 194.5 197 58.4
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 2.5e-44 183.0 165 63.0
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 7.3e-44 181.4 191 55.5
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 7.3e-44 181.4 194 53.6
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 1.6e-43 180.3 155 64.5
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 3.6e-43 179.1 124 69.4
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 4.7e-43 178.7 132 68.9
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 4.7e-43 178.7 138 69.6
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 6.8e-42 174.9 205 51.2
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 6.8e-42 174.9 170 57.6
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.3e-40 170.6 134 67.9
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 1.7e-40 170.2 195 53.8
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 1.4e-39 167.2 130 68.5
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 1.8e-39 166.8 130 64.6
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 3.2e-39 166.0 150 58.7
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 7.0e-39 164.9 131 65.6
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 3.5e-38 162.5 133 60.9
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 4.6e-38 162.2 125 67.2
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 7.8e-38 161.4 136 63.2
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 3.9e-37 159.1 164 55.5
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 6.6e-37 158.3 164 56.1
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 4.3e-36 155.6 154 60.4
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 7.3e-36 154.8 157 57.3
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.2e-35 154.1 157 57.3
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.6e-35 153.7 158 58.9
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 6.2e-35 151.8 157 58.6
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 6.0e-30 135.2 191 49.2
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 1.6e-27 127.1 175 44.0
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 4.4e-25 119.0 133 47.4
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 8.6e-21 104.8 62 83.9
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 2.6e-17 93.2 144 40.3
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 4.9e-16 89.0 88 52.3
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.9e-15 87.0 104 54.8
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 3.2e-15 86.3 116 37.9
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 6.9e-10 68.6 51 64.7
Cpa.g.sc43.61 Carica papaya HOM05D002231 ORTHO05D006103 9.9e-09 64.7 99 47.5
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 3.2e-07 59.7 39 64.1
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.2e-06 57.8 35 80.0


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