Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G028140 Cucumis sativus L. HOM05D007313 ORTHO05D005299 1.8e-31 138.7 72 100.0
MELO3C005274.2 Cucumis melo HOM05D007313 ORTHO05D005299 3.8e-29 131.0 72 94.4
ClCG01G006530 Citrullus lanatus HOM05D007313 ORTHO05D005299 1.2e-22 109.4 69 82.6
Sed0026425 Sechium edule HOM05D007313 ORTHO05D005299 8.2e-16 86.7 65 70.8
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 8.2e-08 60.1 51 64.7
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 2.4e-07 58.5 60 58.3
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.4e-07 58.5 60 58.3
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.4e-07 58.5 60 58.3
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.4e-07 58.5 60 58.3
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.4e-07 58.5 60 58.3
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 2.4e-07 58.5 60 58.3
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 2.4e-07 58.5 60 58.3
Cfa015015 Carpinus fangiana HOM05D007313 ORTHO05D005299 5.3e-07 57.4 49 65.3
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 9.1e-07 56.6 62 53.2
Haze_10890 Corylus avellana HOM05D007313 ORTHO05D005299 1.2e-06 56.2 49 63.3
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 1.5e-06 55.8 56 57.1
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 1.5e-06 55.8 60 55.0
CANSAT01G0361 Cannabis sativa HOM05D007313 ORTHO05D005299 5.9e-06 53.9 58 53.4
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 5.9e-06 53.9 55 54.5


User provided reference genes

Program Settings