Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 1.2e-61 239.6 116 100.0
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 3.0e-60 235.0 116 98.3
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 7.1e-54 213.8 116 92.2
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 2.7e-53 211.8 116 89.7
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 2.7e-45 185.3 116 79.3
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 3.6e-45 184.9 116 77.6
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 2.3e-44 182.2 116 75.9
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.3e-44 182.2 116 75.9
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.3e-44 182.2 116 75.9
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.3e-44 182.2 116 75.9
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 5.1e-44 181.0 116 77.6
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 1.5e-43 179.5 116 75.9
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 2.0e-43 179.1 116 73.3
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 5.7e-43 177.6 116 75.9
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 9.7e-43 176.8 116 75.9
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.7e-42 176.0 118 76.3
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 2.2e-42 175.6 120 73.3
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.2e-42 175.6 116 73.3
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 2.8e-42 175.3 117 73.5
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 3.7e-42 174.9 100 88.0
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 3.7e-42 174.9 117 73.5
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 3.7e-42 174.9 116 73.3
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 4.8e-42 174.5 116 77.6
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 8.2e-42 173.7 116 79.3
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 1.1e-41 173.3 101 82.2
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 1.4e-41 172.9 118 76.3
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 1.8e-41 172.6 96 85.4
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.8e-41 172.6 116 73.3
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 2.4e-41 172.2 116 74.1
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 2.4e-41 172.2 116 74.1
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 4.1e-41 171.4 99 85.9
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 6.9e-41 170.6 117 70.9
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 9.1e-41 170.2 99 84.8
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 1.2e-40 169.9 108 78.7
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 1.2e-40 169.9 126 70.6
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 1.5e-40 169.5 119 73.9
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 1.5e-40 169.5 105 77.1
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.0e-40 169.1 99 83.8
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 2.0e-40 169.1 99 83.8
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.6e-40 168.7 99 82.8
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 3.4e-40 168.3 116 77.6
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 4.5e-40 167.9 96 83.3
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 4.5e-40 167.9 96 83.3
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 4.5e-40 167.9 117 76.1
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 5.9e-40 167.5 97 84.5
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 7.7e-40 167.2 118 70.3
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 7.7e-40 167.2 99 82.8
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 7.7e-40 167.2 99 82.8
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 1.7e-39 166.0 107 76.6
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 2.2e-39 165.6 117 76.1
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 2.2e-39 165.6 95 84.2
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 2.2e-39 165.6 96 82.3
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 2.9e-39 165.2 99 81.8
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 3.8e-39 164.9 123 70.7
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 3.8e-39 164.9 123 70.7
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 5.0e-39 164.5 96 81.2
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 6.5e-39 164.1 117 76.9
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 6.5e-39 164.1 96 83.3
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 8.5e-39 163.7 130 66.9
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 1.1e-38 163.3 102 79.4
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 1.9e-38 162.5 110 73.6
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.9e-38 162.5 107 75.7
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 2.5e-38 162.2 104 74.0
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 9.4e-38 160.2 97 75.3
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 9.4e-38 160.2 100 77.0
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 1.6e-37 159.5 109 77.1
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 2.7e-37 158.7 97 74.2
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 4.7e-37 157.9 117 65.8
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 4.7e-37 157.9 117 65.8
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 4.7e-37 157.9 117 65.8
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 6.1e-37 157.5 117 65.8
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 6.1e-37 157.5 117 65.8
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 6.1e-37 157.5 118 68.6
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 6.1e-37 157.5 118 69.5
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 6.1e-37 157.5 102 77.5
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 7.9e-37 157.1 102 75.5
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 1.0e-36 156.8 103 72.8
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 1.8e-36 156.0 99 76.8
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 6.7e-36 154.1 94 83.0
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 8.8e-36 153.7 116 66.4
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 8.8e-36 153.7 127 61.4
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 8.8e-36 153.7 81 87.7
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.5e-35 152.9 99 76.8
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 2.6e-35 152.1 97 74.2
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 7.4e-35 150.6 105 68.6
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 1.4e-33 146.4 109 64.2
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 8.5e-31 137.1 103 65.0
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 2.5e-30 135.6 104 59.6
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 8.8e-28 127.1 100 57.0
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 9.7e-27 123.6 103 65.0
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 4.8e-26 121.3 104 64.4
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 2.4e-25 119.0 93 54.8
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 5.3e-25 117.9 81 71.6
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 2.2e-23 112.5 64 84.4
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 2.5e-22 109.0 98 50.0
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.5e-22 109.0 90 60.0
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 9.4e-22 107.1 60 85.0
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 1.1e-17 93.6 77 51.9
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 2.3e-12 75.9 92 34.8
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 2.2e-10 69.3 58 56.9
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.7e-07 59.7 56 55.4


User provided reference genes

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