Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G026690 Cucumis sativus L. HOM05D008678 ORTHO05D010561 3.4e-95 351.7 178 100.0
MELO3C021628.2 Cucumis melo HOM05D008678 ORTHO05D010561 1.1e-80 303.5 179 87.7
Sed0024942 Sechium edule HOM05D008678 ORTHO05D010561 6.7e-43 177.9 191 59.2
Sed0022973 Sechium edule HOM05D008678 ORTHO05D010561 1.5e-34 150.2 190 53.7
Actinidia25006 Actinidia chinensis HOM05D008678 ORTHO05D010561 3.1e-16 89.4 186 41.4
Haze_13871 Corylus avellana HOM05D008678 ORTHO05D010561 4.5e-15 85.5 202 36.6
Nitab4.5_0001383g0020 Nicotiana tabacum HOM05D008678 ORTHO05D010561 2.9e-14 82.8 200 37.5
Cfa020725 Carpinus fangiana HOM05D008678 ORTHO05D010561 8.5e-14 81.3 205 34.6
Haze_19041 Corylus avellana HOM05D008678 ORTHO05D010561 1.9e-13 80.1 210 36.7
Dinv22950 Davidia involucrata HOM05D005186 ORTHO05D006278 2.5e-13 79.7 137 43.1
Cfa008178 Carpinus fangiana HOM05D008678 ORTHO05D010561 4.2e-13 79.0 211 33.6
Nitab4.5_0003875g0050 Nicotiana tabacum HOM05D008678 ORTHO05D010561 1.2e-12 77.4 209 36.4
vmacro06794 Vaccinium macrocarpon HOM05D008678 ORTHO05D010561 1.0e-11 74.3 210 38.1
Thecc.03G156400 Theobroma cacao HOM05D008678 ORTHO05D010561 5.2e-11 72.0 113 44.2
CiPaw.03G094000 Carya illinoinensis HOM05D008678 ORTHO05D010561 1.1e-10 70.9 235 34.5
Hma1.2p1_1640F.1_g295075 Hydrangea macrophylla HOM05D008678 ORTHO05D010561 1.1e-10 70.9 195 37.4
Hma1.2p1_1640F.1_g295090 Hydrangea macrophylla HOM05D008678 ORTHO05D010561 1.1e-10 70.9 195 37.4
COL.COLO4_14128 Corchorus olitorius HOM05D008678 ORTHO05D010561 1.5e-10 70.5 223 32.7
RhsimUnG0046600 Rhododendron simsii HOM05D008678 ORTHO05D010561 1.5e-10 70.5 224 34.8
Gohir.A12G198800 Gossypium hirsutum HOM05D008678 ORTHO05D010561 2.0e-10 70.1 123 41.5
Oeu015316.1 Olea europaea HOM05D008678 ORTHO05D010561 2.6e-10 69.7 192 37.5
Rhsim03G0168000 Rhododendron simsii HOM05D008678 ORTHO05D010561 2.6e-10 69.7 233 34.3
Aqoxy5G00775 Aquilegia oxysepala HOM05D008678 ORTHO05D010561 3.3e-10 69.3 142 39.4
PGSC0003DMG400013859 Solanum tuberosum HOM05D008678 ORTHO05D010561 9.7e-10 67.8 191 34.6
Cpa.g.sc3.317 Carica papaya HOM05D008678 ORTHO05D010561 2.2e-09 66.6 103 40.8
Gohir.D12G201500 Gossypium hirsutum HOM05D008678 ORTHO05D010561 2.2e-09 66.6 123 39.8
Solyc03g083980.1 Solanum lycopersicum HOM05D008678 ORTHO05D010561 2.2e-09 66.6 191 33.0
VMungo1127G0666 Vigna mungo HOM05D016164 ORTHO05D010561 2.2e-09 66.6 237 30.4
Ciclev10006531m.g Citrus clementina HOM05D008678 ORTHO05D010561 2.8e-09 66.2 188 36.2
Prupe.2G277600 Prunus persica HOM05D008678 ORTHO05D010561 2.8e-09 66.2 260 29.6
Nn6g34019 Nelumbo nucifera HOM05D008678 ORTHO05D010561 6.3e-09 65.1 171 36.3
Cc02_g04210 Coffea canephora HOM05D008678 ORTHO05D010561 1.1e-08 64.3 212 32.1
Peaxi162Scf00241g00033 Petunia axillaris HOM05D008678 ORTHO05D010561 1.4e-08 63.9 211 35.5
Gorai.008G216600 Gossypium raimondii HOM05D008678 ORTHO05D010561 7.0e-08 61.6 201 33.3
MD07G1254300 Malus domestica HOM05D008678 ORTHO05D010561 2.0e-07 60.1 160 35.0
Nn1g01065 Nelumbo nucifera HOM05D008678 ORTHO05D010561 2.0e-07 60.1 104 39.4
Oeu037645.1 Olea europaea HOM05D008678 ORTHO05D010561 3.5e-07 59.3 192 33.3
Manes.14G035600 Manihot esculenta HOM05D008678 ORTHO05D010561 2.9e-06 56.2 170 33.5


User provided reference genes

Program Settings