Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G024990 Cucumis sativus L. HOM05D002217 ORTHO05D002093 3.6e-28 127.5 62 100.0
MELO3C003217.2 Cucumis melo HOM05D002217 ORTHO05D002093 2.1e-20 101.7 58 84.5
CsaV3_4G025910 Cucumis sativus L. HOM05D002217 ORTHO05D002093 2.1e-20 101.7 58 84.5
ClCG04G007340 Citrullus lanatus HOM05D002217 ORTHO05D002093 2.0e-15 85.1 58 72.4
Sed0000780 Sechium edule HOM05D002217 ORTHO05D002093 1.0e-14 82.8 59 69.5
Phvul.010G006300 Phaseolus vulgaris HOM05D002217 ORTHO05D002093 1.7e-09 65.5 58 53.4
VMungo0331G1414 Vigna mungo HOM05D002217 ORTHO05D002093 2.2e-09 65.1 58 53.4
Glyma.01G109200 Glycine max HOM05D002217 ORTHO05D002093 4.9e-09 63.9 58 51.7
Psat7g241760 Pisum sativum HOM05D002217 ORTHO05D002093 1.1e-08 62.8 59 54.2
Glyma.03G074300 Glycine max HOM05D002217 ORTHO05D002093 2.4e-08 61.6 58 51.7
QL07p027523 Quercus lobata HOM05D002217 ORTHO05D002093 2.4e-08 61.6 58 51.7
Ca_20113_v3 Cicer arietinum L. HOM05D002217 ORTHO05D002093 7.1e-08 60.1 60 50.0
Phvul.008G111500 Phaseolus vulgaris HOM05D002217 ORTHO05D002093 9.2e-08 59.7 58 50.0
Glyma.18G193900 Glycine max HOM05D002217 ORTHO05D002093 1.2e-07 59.3 58 50.0
Lj1g0017886 Lotus japonicus HOM05D002217 ORTHO05D002093 1.2e-07 59.3 58 51.7
TPR.G8951 Trifolium pratense HOM05D002217 ORTHO05D002093 1.2e-07 59.3 61 52.5
VMungo1383G2537 Vigna mungo HOM05D002217 ORTHO05D002093 1.2e-07 59.3 58 48.3
Lalb_Chr19g0124871 Lupinus albus HOM05D002217 ORTHO05D002093 2.1e-07 58.5 62 48.4
GSVIVG01034031001 Vitis vinifera HOM05D002217 ORTHO05D002093 3.5e-07 57.8 58 48.3
Medtr4g019080 Medicago truncatula HOM05D002217 ORTHO05D002093 4.6e-07 57.4 60 50.0
FAN02G2496 Fragaria x ananassa HOM05D002217 ORTHO05D002093 2.3e-06 55.1 58 44.8
Potri.016G107200 Populus trichocarpa HOM05D002217 ORTHO05D002093 2.3e-06 55.1 58 46.6
Ciclev10012045m.g Citrus clementina HOM05D002217 ORTHO05D002093 3.0e-06 54.7 58 48.3
FvH4_6g12300 Fragaria vesca HOM05D002217 ORTHO05D002093 3.0e-06 54.7 58 44.8
FAN05G0969 Fragaria x ananassa HOM05D002217 ORTHO05D002093 3.0e-06 54.7 58 44.8
FAN05G2512 Fragaria x ananassa HOM05D002217 ORTHO05D002093 3.0e-06 54.7 58 44.8
FAN09G2860 Fragaria x ananassa HOM05D002217 ORTHO05D002093 3.0e-06 54.7 58 44.8
Glyma.07G143000 Glycine max HOM05D002217 ORTHO05D002093 3.0e-06 54.7 58 51.7
RcHm_v2.0_Chr3g0464131 Rosa chinensis HOM05D002217 ORTHO05D002093 3.9e-06 54.3 58 41.4
Cc06_g01820 Coffea canephora HOM05D002217 ORTHO05D002093 5.1e-06 53.9 59 44.1
DCAR_028788 Daucus carota HOM05D002217 ORTHO05D002093 5.1e-06 53.9 58 44.8
Actinidia29148 Actinidia chinensis HOM05D002217 ORTHO05D002093 8.6e-06 53.1 59 45.8
Potri.006G094900 Populus trichocarpa HOM05D002217 ORTHO05D002093 8.6e-06 53.1 58 44.8
Sabra06G0072700 Salix brachista HOM05D002217 ORTHO05D002093 8.6e-06 53.1 58 48.3
SalBow3G0620 Salvia bowleyana HOM05D002217 ORTHO05D002093 8.6e-06 53.1 59 42.4


User provided reference genes

Program Settings