Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 3.7e-291 1004.2 527 100.0
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 1.1e-287 992.6 527 98.7
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 8.6e-280 966.5 521 96.9
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 7.3e-247 857.1 539 82.9
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 1.2e-246 856.3 471 94.5
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 5.8e-244 847.4 527 82.7
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 2.2e-243 845.5 533 80.9
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 1.9e-242 842.4 514 83.1
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 7.1e-242 840.5 530 81.3
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 1.2e-241 839.7 527 80.3
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 2.1e-241 839.0 533 81.1
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 4.6e-241 837.8 527 82.0
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 3.9e-240 834.7 528 81.4
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 8.7e-240 833.6 503 83.7
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 1.1e-239 833.2 550 78.9
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 1.1e-239 833.2 538 79.7
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 1.1e-239 833.2 542 79.7
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 1.9e-239 832.4 527 80.8
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 1.9e-239 832.4 521 81.2
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 3.3e-239 831.6 514 82.5
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 5.6e-239 830.9 531 80.2
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 7.3e-239 830.5 514 82.7
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 9.6e-239 830.1 514 82.5
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 3.6e-238 828.2 514 82.3
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 6.2e-238 827.4 554 78.3
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 1.8e-237 825.9 502 83.3
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 2.4e-237 825.5 531 79.7
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 2.0e-236 822.4 515 82.5
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 2.6e-236 822.0 531 78.9
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 1.7e-235 819.3 521 80.8
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 2.9e-235 818.5 541 78.6
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 2.9e-235 818.5 516 80.4
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 4.2e-234 814.7 538 79.0
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 4.2e-234 814.7 531 78.5
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 5.4e-234 814.3 544 78.9
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 5.4e-234 814.3 523 79.7
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 3.5e-233 811.6 516 80.4
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 4.6e-233 811.2 539 78.5
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 8.1e-230 800.4 517 79.7
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 3.1e-229 798.5 501 81.4
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 1.7e-227 792.7 515 78.8
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 4.9e-227 791.2 533 76.5
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 7.1e-226 787.3 501 79.0
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 2.1e-225 785.8 501 78.8
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 2.7e-225 785.4 501 78.8
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 1.3e-224 783.1 512 77.1
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 1.8e-224 782.7 501 78.2
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 3.3e-223 778.5 526 75.3
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 4.3e-223 778.1 543 73.7
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 2.1e-222 775.8 546 74.5
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 4.0e-221 771.5 517 78.3
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 4.0e-221 771.5 509 77.2
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 4.5e-220 768.1 508 77.0
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 1.3e-219 766.5 502 77.5
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 1.3e-219 766.5 500 76.4
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 2.2e-219 765.8 502 77.7
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 6.4e-219 764.2 528 76.5
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 1.9e-218 762.7 519 73.2
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 1.9e-218 762.7 527 74.6
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 1.9e-218 762.7 547 73.5
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 4.2e-218 761.5 512 75.8
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 1.2e-217 760.0 504 76.6
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 3.0e-216 755.4 504 76.0
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 5.1e-216 754.6 512 75.2
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 6.7e-216 754.2 512 74.8
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 2.5e-215 752.3 533 74.1
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 2.5e-215 752.3 523 74.6
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 3.3e-215 751.9 502 76.5
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 4.3e-215 751.5 515 76.9
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 5.6e-215 751.1 543 73.1
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 6.2e-214 747.7 525 73.7
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 3.1e-213 745.3 520 73.7
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 9.0e-213 743.8 535 72.5
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 1.2e-212 743.4 501 76.0
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 5.8e-212 741.1 526 73.4
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 7.1e-210 734.2 626 65.0
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 5.1e-208 728.0 515 72.2
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.1e-207 726.9 608 65.6
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 1.5e-207 726.5 524 72.5
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 1.9e-207 726.1 538 71.9
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 7.4e-207 724.2 506 74.9
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 1.8e-205 719.5 516 73.3
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 2.4e-205 719.2 543 69.4
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 2.6e-196 689.1 516 69.2
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 3.8e-195 685.3 485 73.6
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 9.4e-194 680.6 516 67.6
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 1.2e-193 680.2 514 68.1
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 6.7e-192 674.5 592 63.0
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 3.3e-191 672.2 526 68.4
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 7.4e-191 671.0 516 69.2
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 1.2e-188 663.7 557 63.4
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 8.0e-185 651.0 424 78.5
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 9.7e-183 644.0 444 75.5
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 5.9e-180 634.8 533 62.1
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 5.9e-180 634.8 533 62.1
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 5.5e-170 601.7 471 65.4
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 4.7e-169 598.6 469 68.9
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 1.9e-162 576.6 521 57.4
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 5.5e-162 575.1 399 75.2
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 1.3e-158 563.9 487 60.2
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 6.6e-155 551.6 360 77.5
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 2.1e-153 546.6 382 74.9
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 4.9e-150 535.4 330 82.7
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 8.9e-144 514.6 338 77.8
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 1.6e-129 467.2 322 75.5
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 6.0e-116 422.2 249 83.5
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 1.0e-115 421.4 249 83.5
HanXRQChr16g0532221 Helianthus annuus HOM05D004787 ORTHO05D006972 7.9e-108 395.2 450 53.8
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 1.7e-102 377.5 507 43.2
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 1.4e-101 374.4 240 78.3
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 2.1e-97 360.5 487 43.1
PRCOL_00000524 Prasinoderma coloniale HOM05D004787 ORTHO05D006972 6.5e-86 322.4 485 40.2
CDE02G3895 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 1.7e-78 297.7 328 54.0
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 5.3e-72 276.2 173 79.2
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 5.9e-55 219.5 494 36.4
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 8.0e-52 209.1 265 48.7
Cfa023088 Carpinus fangiana HOM05D004787 ORTHO05D006972 2.8e-49 200.7 504 33.1
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 2.0e-47 194.5 488 34.0
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 5.9e-47 193.0 118 81.4
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 3.5e-39 167.2 485 33.0
Medtr8g023320 Medicago truncatula HOM05D004787 ORTHO05D006972 5.9e-39 166.4 115 73.9
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 2.5e-37 161.0 293 40.6
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-32 145.6 489 30.9
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-29 135.6 498 30.3
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-27 128.3 331 36.0
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 1.8e-27 128.3 86 69.8
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 3.7e-25 120.6 287 36.6
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 3.7e-25 120.6 296 33.8
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 4.9e-25 120.2 287 36.2
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 5.4e-24 116.7 210 41.0
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 9.2e-24 115.9 238 39.5
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 2.1e-23 114.8 353 32.9
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 1.7e-22 111.7 323 30.3
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-21 108.6 158 43.0
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 5.6e-21 106.7 209 40.7
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 4.7e-20 103.6 158 41.8
HanXRQChr16g0532231 Helianthus annuus HOM05D004787 ORTHO05D006972 6.2e-20 103.2 59 81.4
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 6.8e-19 99.8 331 28.7
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-18 99.0 208 39.4
Zm00001eb168130 Zea mays HOM05D004787 ORTHO05D001664 2.0e-18 98.2 74 60.8
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 2.9e-17 94.4 388 29.4
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 3.2e-16 90.9 442 29.0
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 9.2e-16 89.4 233 30.9
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 1.2e-15 89.0 396 29.5
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-11 75.1 140 40.7
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 1.2e-10 72.4 356 28.4
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 8.4e-09 66.2 351 29.1
arahy.Tifrunner.gnm1.ann1.0EHY87 Arachis hypogaea HOM05D004017 ORTHO05D004612 1.7e-06 58.5 57 56.1
FAN21G2314 Fragaria x ananassa HOM05D027463 ORTHO05D206097 2.3e-06 58.2 48 62.5
FAN24G2421 Fragaria x ananassa HOM05D000203 ORTHO05D035425 5.1e-06 57.0 47 61.7


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