Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G023890 Cucumis sativus L. HOM05D004462 ORTHO05D005231 4.0e-78 294.7 146 100.0
ClCG03G008870 Citrullus lanatus HOM05D004462 ORTHO05D005231 4.3e-72 274.6 144 92.4
MELO3C022821.2 Cucumis melo HOM05D004462 ORTHO05D005231 5.8e-61 237.7 121 94.2
Sed0028045 Sechium edule HOM05D004462 ORTHO05D005231 9.9e-61 236.9 144 78.5
Thecc.08G108000 Theobroma cacao HOM05D004462 ORTHO05D005231 6.4e-60 234.2 146 73.3
Sed0009749 Sechium edule HOM05D004462 ORTHO05D005231 1.4e-59 233.0 144 77.8
TWI53G1401 Tripterygium wilfordii HOM05D004462 ORTHO05D005231 1.4e-59 233.0 144 77.1
Eucgr.F02921 Eucalyptus grandis HOM05D004462 ORTHO05D005231 9.3e-59 230.3 139 78.4
PGR044G0250 Punica granatum HOM05D004462 ORTHO05D005231 9.3e-59 230.3 143 76.2
COL.COLO4_16416 Corchorus olitorius HOM05D004462 ORTHO05D005231 1.8e-57 226.1 143 72.7
THA.LOC104805662 Tarenaya hassleriana HOM05D004462 ORTHO05D005231 2.3e-57 225.7 144 72.2
Duzib138G0229 Durio zibethinus HOM05D004462 ORTHO05D005231 5.1e-57 224.6 143 72.0
AUR62004745 Chenopodium quinoa HOM05D004462 ORTHO05D005231 6.7e-57 224.2 137 74.5
Sp5g20770 Schrenkiella parvula HOM05D004462 ORTHO05D005231 6.7e-57 224.2 144 72.9
Nitab4.5_0000483g0160 Nicotiana tabacum HOM05D004462 ORTHO05D005231 8.7e-57 223.8 143 71.3
Actinidia32995 Actinidia chinensis HOM05D004462 ORTHO05D005231 1.1e-56 223.4 143 73.4
AUR62037507 Chenopodium quinoa HOM05D004462 ORTHO05D005231 1.1e-56 223.4 137 75.2
Prupe.3G165500 Prunus persica HOM05D004462 ORTHO05D005231 1.1e-56 223.4 141 73.8
FAN23G0373 Fragaria x ananassa HOM05D004462 ORTHO05D005231 1.5e-56 223.0 142 72.5
Atru.chr1.1966 Acer truncatum HOM05D004462 ORTHO05D005231 1.9e-56 222.6 140 72.1
Ciclev10013005m.g Citrus clementina HOM05D004462 ORTHO05D005231 1.9e-56 222.6 143 74.8
RcHm_v2.0_Chr3g0491671 Rosa chinensis HOM05D004462 ORTHO05D005231 2.5e-56 222.2 142 71.8
Sc09g0004600 Simmondsia chinensis HOM05D004462 ORTHO05D005231 2.5e-56 222.2 138 75.4
Dinv28268 Davidia involucrata HOM05D004462 ORTHO05D005231 4.3e-56 221.5 143 72.7
FvH4_1g30090 Fragaria vesca HOM05D004462 ORTHO05D005231 5.6e-56 221.1 142 71.1
FAN19G2026 Fragaria x ananassa HOM05D004462 ORTHO05D005231 5.6e-56 221.1 142 71.1
A06p23000 Brassica napus HOM05D004462 ORTHO05D005231 7.4e-56 220.7 144 71.5
RcHm_v2.0_Chr3g0491701 Rosa chinensis HOM05D004462 ORTHO05D005231 7.4e-56 220.7 142 71.8
AT1G65820 Arabidopsis thaliana HOM05D004462 ORTHO05D005231 1.3e-55 219.9 144 74.3
A02p13370 Brassica napus HOM05D004462 ORTHO05D005231 1.3e-55 219.9 144 71.5
BcaC03g14720 Brassica carinata HOM05D004462 ORTHO05D005231 1.6e-55 219.5 144 71.5
C02p21630 Brassica napus HOM05D004462 ORTHO05D005231 1.6e-55 219.5 144 71.5
RcHm_v2.0_Chr3g0491741 Rosa chinensis HOM05D004462 ORTHO05D005231 1.6e-55 219.5 142 71.8
MSTRG.15620 Avicennia marina HOM05D004462 ORTHO05D005231 2.1e-55 219.2 143 70.6
QL02p063959 Quercus lobata HOM05D004462 ORTHO05D005231 2.1e-55 219.2 138 76.8
Manes.02G082400 Manihot esculenta HOM05D004462 ORTHO05D005231 2.8e-55 218.8 145 73.8
Thhalv10027981m.g Eutrema salsugineum HOM05D004462 ORTHO05D005231 3.7e-55 218.4 144 70.8
C04p44160 Brassica napus HOM05D004462 ORTHO05D005231 4.8e-55 218.0 144 72.9
CARHR057680 Cardamine hirsuta HOM05D004462 ORTHO05D005231 4.8e-55 218.0 143 70.6
Peaxi162Scf00344g01910 Petunia axillaris HOM05D004462 ORTHO05D005231 6.2e-55 217.6 143 71.3
Carub.0002s1171 Capsella rubella HOM05D004462 ORTHO05D005231 8.1e-55 217.2 144 72.2
AL2G23110 Arabidopsis lyrata HOM05D004462 ORTHO05D005231 1.1e-54 216.9 145 72.4
BcaB05g24136 Brassica carinata HOM05D004462 ORTHO05D005231 1.1e-54 216.9 144 70.8
Duzib128G1697 Durio zibethinus HOM05D004462 ORTHO05D005231 1.1e-54 216.9 143 69.2
BcaC02g09558 Brassica carinata HOM05D004462 ORTHO05D005231 1.4e-54 216.5 144 72.2
A04p10520 Brassica napus HOM05D004462 ORTHO05D005231 1.4e-54 216.5 144 72.2
Cfa007736 Carpinus fangiana HOM05D004462 ORTHO05D005231 1.4e-54 216.5 144 71.5
MD09G1269000 Malus domestica HOM05D004462 ORTHO05D005231 1.4e-54 216.5 142 70.4
BcaB04g19159 Brassica carinata HOM05D004462 ORTHO05D005231 1.8e-54 216.1 144 68.1
Hma1.2p1_0085F.1_g043860 Hydrangea macrophylla HOM05D004462 ORTHO05D005231 1.8e-54 216.1 144 70.8
CANSAT35G0603 Cannabis sativa HOM05D004462 ORTHO05D005231 3.1e-54 215.3 143 71.3
CARHR215890 Cardamine hirsuta HOM05D004462 ORTHO05D005231 3.1e-54 215.3 144 71.5
Nn4g24875 Nelumbo nucifera HOM05D004462 ORTHO05D005231 3.1e-54 215.3 144 70.8
Oeu002679.1 Olea europaea HOM05D004462 ORTHO05D005231 4.0e-54 214.9 140 70.7
Haze_14345 Corylus avellana HOM05D004462 ORTHO05D005231 5.3e-54 214.5 144 70.8
Gohir.A08G037800 Gossypium hirsutum HOM05D004462 ORTHO05D005231 5.3e-54 214.5 143 69.9
Nn6g35012 Nelumbo nucifera HOM05D004462 ORTHO05D005231 5.3e-54 214.5 143 71.3
BraA02t06395Z Brassica rapa HOM05D004462 ORTHO05D005231 9.0e-54 213.8 149 69.1
GSVIVG01001479001 Vitis vinifera HOM05D004462 ORTHO05D005231 9.0e-54 213.8 144 72.9
Gohir.D08G048100 Gossypium hirsutum HOM05D004462 ORTHO05D005231 1.5e-53 213.0 143 69.2
Gorai.004G047600 Gossypium raimondii HOM05D004462 ORTHO05D005231 1.5e-53 213.0 143 69.2
CiPaw.04G050400 Carya illinoinensis HOM05D004462 ORTHO05D005231 2.0e-53 212.6 136 72.8
CiPaw.03G079700 Carya illinoinensis HOM05D004462 ORTHO05D005231 2.6e-53 212.2 144 75.0
Sp7g05300 Schrenkiella parvula HOM05D004462 ORTHO05D005231 2.6e-53 212.2 144 69.4
PSO063G2986 Papaver somniferum HOM05D004462 ORTHO05D005231 3.4e-53 211.8 144 70.8
Aa31LG2G2630 Aethionema arabicum HOM05D000188 ORTHO05D000362 4.5e-53 211.5 172 61.0
PSO782G5040 Papaver somniferum HOM05D004462 ORTHO05D005231 5.8e-53 211.1 144 70.8
Gohir.A07G176700 Gossypium hirsutum HOM05D004462 ORTHO05D005231 9.9e-53 210.3 139 68.3
EL10Ac4g08901 Beta vulgaris HOM05D004462 ORTHO05D005231 1.3e-52 209.9 137 70.8
MBI12_g42585_MAGBIO Magnolia biondii HOM05D004462 ORTHO05D005231 1.3e-52 209.9 144 69.4
CAN.G809.94 Capsicum annuum HOM05D004462 ORTHO05D005231 1.7e-52 209.5 143 67.1
BolC2t08300H Brassica oleracea HOM05D004462 ORTHO05D005231 2.2e-52 209.1 160 64.4
Gohir.D07G184000 Gossypium hirsutum HOM05D004462 ORTHO05D005231 2.9e-52 208.8 139 67.6
Gorai.001G204400 Gossypium raimondii HOM05D004462 ORTHO05D005231 2.9e-52 208.8 139 67.6
MD17G1267400 Malus domestica HOM05D004462 ORTHO05D005231 3.8e-52 208.4 142 68.3
LjContig00141g0019021 Lotus japonicus HOM05D004462 ORTHO05D005231 4.9e-52 208.0 143 69.2
HPP92_016581 Vanilla planifolia HOM05D004462 ORTHO05D005231 6.4e-52 207.6 145 67.6
BraA04t16718Z Brassica rapa HOM05D004462 ORTHO05D005231 1.9e-51 206.1 163 64.4
Os03g0709000 Oryza sativa ssp. japonica HOM05D004462 ORTHO05D005231 2.4e-51 205.7 143 66.4
FAN28G0360 Fragaria x ananassa HOM05D004462 ORTHO05D005231 4.2e-51 204.9 132 70.5
PGSC0003DMG400019728 Solanum tuberosum HOM05D004462 ORTHO05D005231 4.2e-51 204.9 143 64.3
HPP92_011089 Vanilla planifolia HOM05D004462 ORTHO05D005231 4.2e-51 204.9 143 66.4
CSS0041519 Camellia sinensis var. sinensis HOM05D004462 ORTHO05D005231 7.1e-51 204.1 143 69.2
Cc00_g30600 Coffea canephora HOM05D004462 ORTHO05D005231 7.1e-51 204.1 141 68.1
Cc02_g03200 Coffea canephora HOM05D004462 ORTHO05D005231 7.1e-51 204.1 141 68.1
Nn4g24876 Nelumbo nucifera HOM05D004462 ORTHO05D005231 9.3e-51 203.8 143 67.8
Sabra17G0118400 Salix brachista HOM05D004462 ORTHO05D005231 1.6e-50 203.0 142 66.9
Carub.0007s3236 Capsella rubella HOM05D004462 ORTHO05D005231 2.7e-50 202.2 147 66.0
Sopen02g026070 Solanum pennellii HOM05D004462 ORTHO05D005231 2.7e-50 202.2 143 64.3
Actinidia28772 Actinidia chinensis HOM05D004462 ORTHO05D005231 3.5e-50 201.8 143 67.1
HPP92_011106 Vanilla planifolia HOM05D004462 ORTHO05D005231 3.5e-50 201.8 143 65.7
ATR0753G103 Amborella trichopoda HOM05D004462 ORTHO05D005231 6.0e-50 201.1 137 65.7
Aqoxy3G04063 Aquilegia oxysepala HOM05D004462 ORTHO05D005231 1.0e-49 200.3 143 67.1
Migut.K01204 Erythranthe guttata HOM05D004462 ORTHO05D005231 1.3e-49 199.9 145 66.2
vmacro18490 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 1.8e-49 199.5 143 65.0
Lalb_Chr10g0104001 Lupinus albus HOM05D004462 ORTHO05D005231 2.3e-49 199.1 141 66.0
DCAR_003393 Daucus carota HOM05D004462 ORTHO05D005231 3.0e-49 198.7 144 63.2
Solyc02g081430.3 Solanum lycopersicum HOM05D004462 ORTHO05D005231 3.0e-49 198.7 143 62.9
Psat2g044120 Pisum sativum HOM05D004462 ORTHO05D005231 3.9e-49 198.4 140 67.1
TPR.G5341 Trifolium pratense HOM05D004462 ORTHO05D005231 3.9e-49 198.4 143 66.4
Medtr5g076470 Medicago truncatula HOM05D004462 ORTHO05D005231 1.1e-48 196.8 140 69.3
Potri.017G140900 Populus trichocarpa HOM05D004462 ORTHO05D005231 1.1e-48 196.8 144 63.9
CDE05G2284 Ceratophyllum demersum HOM05D004462 ORTHO05D005231 1.9e-48 196.1 143 67.1
Ca_17052_v3 Cicer arietinum L. HOM05D004462 ORTHO05D005231 3.3e-48 195.3 140 66.4
arahy.Tifrunner.gnm1.ann1.TN4V22 Arachis hypogaea HOM05D004462 ORTHO05D005231 4.3e-48 194.9 140 67.1
Cpa.g.c42729 Carica papaya HOM05D004462 ORTHO05D005231 1.3e-47 193.4 127 72.4
Hund06859 Selenicereus undatus HOM05D004462 ORTHO05D005231 3.7e-47 191.8 125 72.8
SalBow5G4757 Salvia bowleyana HOM05D004462 ORTHO05D005231 4.8e-47 191.4 143 60.8
SMO115G0120 Selaginella moellendorffii HOM05D004462 ORTHO05D005231 6.2e-47 191.0 143 63.6
Sabra04G0051800 Salix brachista HOM05D004462 ORTHO05D005231 3.1e-46 188.7 128 69.5
DCAR_003394 Daucus carota HOM05D004462 ORTHO05D005231 9.0e-46 187.2 143 60.8
PSO210G6210 Papaver somniferum HOM05D004462 ORTHO05D005231 2.0e-45 186.0 121 69.4
DCAR_014136 Daucus carota HOM05D004462 ORTHO05D005231 4.5e-45 184.9 140 60.7
BolC4t25991H Brassica oleracea HOM05D004462 ORTHO05D005231 1.3e-44 183.3 208 50.0
vmacro18489 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 2.2e-44 182.6 121 71.9
Lalb_Chr04g0251561 Lupinus albus HOM05D004462 ORTHO05D005231 2.9e-44 182.2 143 62.9
DCAR_003392 Daucus carota HOM05D004462 ORTHO05D005231 1.1e-43 180.3 143 60.1
HanXRQChr14g0443511 Helianthus annuus HOM05D004462 ORTHO05D005231 1.4e-43 179.9 141 59.6
Zm00001eb054680 Zea mays HOM05D004462 ORTHO05D005231 1.4e-43 179.9 130 65.4
HanXRQChr12g0365631 Helianthus annuus HOM05D004462 ORTHO05D005231 2.5e-43 179.1 141 59.6
CDE06G2132 Ceratophyllum demersum HOM05D004462 ORTHO05D005231 4.2e-43 178.3 138 60.1
vmacro20446 Vaccinium macrocarpon HOM05D004462 ORTHO05D005231 4.2e-43 178.3 143 61.5
arahy.Tifrunner.gnm1.ann1.D1IGUM Arachis hypogaea HOM05D004462 ORTHO05D005231 1.2e-42 176.8 117 71.8
Lsat_1_v5_gn_2_72161 Lactuca sativa HOM05D004462 ORTHO05D005231 1.2e-42 176.8 138 59.4
arahy.Tifrunner.gnm1.ann1.3DVS1U Arachis hypogaea HOM05D004462 ORTHO05D005231 2.1e-42 176.0 117 70.9
Lsat_1_v5_gn_2_72121 Lactuca sativa HOM05D004462 ORTHO05D005231 2.7e-42 175.6 141 54.6
ECA238G1611 Erigeron canadensis HOM05D004462 ORTHO05D005231 3.5e-42 175.3 141 58.9
Rhsim08G0023100 Rhododendron simsii HOM05D004462 ORTHO05D005231 1.5e-40 169.9 117 66.7
Aqoxy3G04064 Aquilegia oxysepala HOM05D004462 ORTHO05D005231 1.6e-39 166.4 139 61.2
MD17G1267600 Malus domestica HOM05D004462 ORTHO05D005231 8.2e-39 164.1 111 65.8
FAN26G3346 Fragaria x ananassa HOM05D004462 ORTHO05D005231 4.5e-37 158.3 98 72.4
Pp3c13_5830 Physcomitrium patens HOM05D004462 ORTHO05D005231 1.7e-36 156.4 133 57.1
Pp3c13_5831 Physcomitrium patens HOM05D004462 ORTHO05D005231 1.7e-36 156.4 133 57.1
Mapoly0075s0081 Marchantia polymorpha HOM05D004462 ORTHO05D005231 3.8e-36 155.2 137 52.6
arahy.Tifrunner.gnm1.ann1.U75ZTX Arachis hypogaea HOM05D004462 ORTHO05D005231 8.5e-36 154.1 114 63.2
arahy.Tifrunner.gnm1.ann1.UF2MTZ Arachis hypogaea HOM05D004462 ORTHO05D005231 1.0e-33 147.1 140 54.3
unitig_748.g8625 Utricularia gibba HOM05D001875 ORTHO05D002019 5.3e-30 134.8 85 71.8
Pp3c12_2960 Physcomitrium patens HOM05D004462 ORTHO05D005231 2.5e-27 125.9 127 48.0
DCAR_010504 Daucus carota HOM05D004462 ORTHO05D005231 1.8e-25 119.8 99 56.6
DCAR_007795 Daucus carota HOM05D004462 ORTHO05D005231 3.0e-25 119.0 99 56.6
CBR_g21744 Chara braunii HOM05D004462 ORTHO05D005231 6.7e-25 117.9 142 47.9
CBR_g266 Chara braunii HOM05D004462 ORTHO05D005231 2.0e-24 116.3 137 44.5
HPP92_009441 Vanilla planifolia HOM05D004462 ORTHO05D005231 2.8e-23 112.5 135 40.0
Pp3c13_5870 Physcomitrium patens HOM05D004462 ORTHO05D005231 3.7e-23 112.1 135 44.4
AagrBONN_evm.TU.Sc2ySwM_117.1823 Anthoceros agrestis HOM05D004462 ORTHO05D005231 4.8e-23 111.7 141 42.6
Mapoly0056s0049 Marchantia polymorpha HOM05D004462 ORTHO05D005231 5.3e-22 108.2 135 43.0
DCAR_028827 Daucus carota HOM05D000012 ORTHO05D000567 9.1e-22 107.5 83 57.8
Cre12.g559800 Chlamydomonas reinhardtii HOM05D004462 ORTHO05D005231 3.4e-21 105.5 138 43.5
CBR_g38628 Chara braunii HOM05D004462 ORTHO05D005231 3.8e-20 102.1 141 41.1
SMO337G0081 Selaginella moellendorffii HOM05D004462 ORTHO05D005231 1.9e-19 99.8 133 39.1
Pp3c6_29390 Physcomitrium patens HOM05D004462 ORTHO05D005231 2.7e-18 95.9 132 40.2
GSVIVG01020320001 Vitis vinifera HOM05D004462 ORTHO05D005231 6.3e-15 84.7 54 72.2
AagrBONN_evm.TU.Sc2ySwM_228.473 Anthoceros agrestis HOM05D004462 ORTHO05D005231 4.1e-14 82.0 93 48.4
DCAR_011767 Daucus carota HOM05D000532 ORTHO05D002414 5.3e-14 81.6 65 56.9
DCAR_006132 Daucus carota HOM05D004462 ORTHO05D005231 7.0e-14 81.3 59 61.0
MCO14G359 Micromonas commoda HOM05D004462 ORTHO05D005231 1.6e-13 80.1 112 41.1
C04p44040 Brassica napus HOM05D004462 ORTHO05D005231 4.5e-13 78.6 55 69.1
C04p44070 Brassica napus HOM05D004462 ORTHO05D005231 4.5e-13 78.6 55 69.1
C04p44110 Brassica napus HOM05D004462 ORTHO05D005231 4.5e-13 78.6 55 69.1
BcaC02g09555 Brassica carinata HOM05D000188 ORTHO05D005231 1.3e-12 77.0 55 67.3
MCO08G122 Micromonas commoda HOM05D004462 ORTHO05D005231 2.2e-12 76.3 133 33.8
Lsat_1_v5_gn_5_96540 Lactuca sativa HOM05D004462 ORTHO05D005231 3.8e-12 75.5 96 44.8
PRCOL_00004990 Prasinoderma coloniale HOM05D004462 ORTHO05D005231 1.5e-08 63.5 117 34.2
TAR371G1025 Trochodendron aralioides HOM05D004462 ORTHO05D005231 2.8e-07 59.3 49 53.1
Rhsim03G0265300 Rhododendron simsii HOM05D001472 ORTHO05D002655 4.8e-07 58.5 63 50.8
Sabra12G0026800 Salix brachista HOM05D001043 ORTHO05D349056 3.1e-06 55.8 66 47.0


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