Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 3.5e-211 738.0 370 100.0
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 2.1e-144 516.2 276 94.9
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 5.3e-143 511.5 309 86.1
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 5.2e-106 388.7 287 72.8
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 5.9e-102 375.2 300 70.0
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 7.7e-102 374.8 283 71.4
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 7.7e-102 374.8 275 72.7
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 1.7e-101 373.6 280 71.8
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.7e-101 373.6 280 71.1
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.5e-100 370.5 291 70.4
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.7e-99 366.3 295 67.5
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 6.1e-99 365.2 309 66.3
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 6.1e-99 365.2 287 69.7
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.4e-98 364.0 286 69.6
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 6.8e-98 361.7 293 65.9
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 6.8e-98 361.7 293 65.9
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 6.8e-98 361.7 282 67.4
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.5e-97 360.5 281 70.8
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 1.5e-97 360.5 273 69.2
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 2.6e-97 359.8 287 68.3
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 5.7e-97 358.6 280 71.4
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 9.8e-97 357.8 279 70.3
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 2.2e-96 356.7 294 66.0
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 3.7e-96 355.9 230 77.4
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 3.7e-96 355.9 282 68.4
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 8.3e-96 354.8 283 68.6
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 1.1e-95 354.4 273 67.8
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.4e-95 354.0 289 67.5
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 1.8e-95 353.6 283 69.3
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.4e-95 353.2 283 69.3
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.4e-95 353.2 292 65.8
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 3.1e-95 352.8 274 68.2
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 5.4e-95 352.1 292 65.4
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 2.7e-94 349.7 276 71.0
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.5e-94 349.4 283 68.6
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 3.5e-94 349.4 276 68.8
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 4.5e-94 349.0 273 67.8
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 4.5e-94 349.0 276 68.5
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 5.9e-94 348.6 273 67.4
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 7.7e-94 348.2 271 68.3
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 3.8e-93 345.9 292 66.8
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 5.0e-93 345.5 281 65.1
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 5.0e-93 345.5 285 67.7
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 5.0e-93 345.5 286 66.1
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 3.3e-92 342.8 277 65.3
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.2e-91 340.9 284 66.2
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 2.1e-91 340.1 275 66.9
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.8e-91 339.7 285 64.6
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 4.7e-91 339.0 275 68.4
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 4.0e-90 335.9 269 67.7
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 6.8e-90 335.1 274 66.4
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 8.9e-90 334.7 272 64.3
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 8.9e-90 334.7 238 76.5
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.2e-89 334.3 409 51.8
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 1.5e-89 334.0 284 66.9
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 2.6e-89 333.2 361 54.6
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 5.7e-89 332.0 293 64.8
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 5.7e-89 332.0 277 63.5
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.7e-88 330.5 295 62.4
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 2.9e-88 329.7 344 57.0
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 6.4e-88 328.6 203 81.8
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 2.4e-87 326.6 278 66.9
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 7.0e-87 325.1 275 64.7
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 9.2e-87 324.7 219 73.1
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 2.0e-86 323.6 269 63.6
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 3.5e-86 322.8 342 55.8
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 3.5e-86 322.8 287 66.2
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 3.5e-86 322.8 287 64.8
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 4.6e-86 322.4 280 64.6
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 6.6e-85 318.5 273 61.2
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 1.5e-84 317.4 302 58.9
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 4.3e-84 315.8 195 81.0
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 5.6e-84 315.5 275 62.5
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 4.4e-81 305.8 278 62.2
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 3.7e-80 302.8 218 69.3
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 6.4e-80 302.0 279 60.9
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.4e-79 300.8 280 60.4
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 4.1e-79 299.3 278 60.8
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.2e-78 297.7 284 57.7
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 3.5e-78 296.2 319 55.2
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.5e-78 296.2 304 55.9
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 1.7e-77 293.9 194 76.8
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 3.9e-77 292.7 279 58.4
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 1.9e-76 290.4 190 77.9
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 3.3e-76 289.7 198 74.7
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 1.6e-75 287.3 284 58.1
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 1.6e-75 287.3 281 58.7
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 2.1e-75 287.0 273 57.9
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 6.2e-75 285.4 211 66.4
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 2.0e-73 280.4 299 54.5
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 9.8e-73 278.1 274 59.5
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 5.4e-71 272.3 201 67.7
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 2.1e-70 270.4 193 68.9
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 2.0e-65 253.8 152 80.9
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 2.9e-64 250.0 246 58.5
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 6.4e-64 248.8 236 55.9
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 9.2e-63 245.0 305 49.5
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.3e-56 224.6 275 52.4
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 6.0e-54 215.7 161 71.4
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 7.3e-52 208.8 133 82.0
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 1.6e-51 207.6 196 59.2
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.2e-49 201.4 131 78.6
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 8.4e-48 195.3 239 48.5
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 6.0e-46 189.1 111 82.9
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 6.0e-46 189.1 209 52.2
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 4.0e-42 176.4 399 36.3
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 2.2e-40 170.6 187 56.7
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 2.5e-31 140.6 145 54.5
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 8.2e-27 125.6 221 39.8
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 2.0e-25 120.9 80 70.0
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.6e-25 120.6 98 65.3
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 7.2e-23 112.5 75 73.3
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 3.0e-21 107.1 282 34.0
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 4.8e-11 73.2 245 27.3
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 9.1e-10 68.9 61 60.7
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.9e-09 66.2 58 56.9
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 6.5e-08 62.8 70 47.1
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.9e-07 61.2 38 73.7
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 5.5e-07 59.7 37 70.3
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 7.2e-07 59.3 33 81.8
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 2.1e-06 57.8 37 70.3


User provided reference genes

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