Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G019990 Cucumis sativus L. HOM05D000762 ORTHO05D006179 3.4e-58 228.0 108 100.0
MELO3C010539.2 Cucumis melo HOM05D000762 ORTHO05D006179 6.9e-35 150.6 74 93.2
CsaV3_4G037910 Cucumis sativus L. HOM05D000762 ORTHO05D006179 6.9e-35 150.6 74 93.2
ClCG11G016210 Citrullus lanatus HOM05D007105 ORTHO05D009304 3.8e-33 144.8 74 87.8
CsaV3_UNG224740 Cucumis sativus L. HOM05D000762 ORTHO05D006179 8.5e-33 143.7 72 94.4
Duzib068G0194 Durio zibethinus HOM05D000762 ORTHO05D006179 9.3e-32 140.2 74 83.8
Thecc.03G322500 Theobroma cacao HOM05D000762 ORTHO05D006179 2.1e-31 139.0 74 82.4
Gohir.A12G200600 Gossypium hirsutum HOM05D000762 ORTHO05D006179 2.7e-31 138.7 74 81.1
THA.LOC104814382 Tarenaya hassleriana HOM05D000762 ORTHO05D006179 6.1e-31 137.5 89 69.7
Gohir.D12G203400 Gossypium hirsutum HOM05D000762 ORTHO05D006179 7.9e-31 137.1 74 81.1
Gorai.008G218200 Gossypium raimondii HOM05D000762 ORTHO05D006179 7.9e-31 137.1 74 81.1
Sed0017777 Sechium edule HOM05D000762 ORTHO05D006179 1.4e-30 136.3 74 83.8
GSVIVG01036916001 Vitis vinifera HOM05D000762 ORTHO05D006179 3.9e-30 134.8 74 79.7
Manes.15G190150 Manihot esculenta HOM05D000762 ORTHO05D006179 1.1e-29 133.3 74 77.0
COL.COLO4_16726 Corchorus olitorius HOM05D000762 ORTHO05D006179 3.3e-29 131.7 74 78.4
Carub.0001s2992 Capsella rubella HOM05D000762 ORTHO05D006179 4.3e-29 131.3 77 75.3
Actinidia30332 Actinidia chinensis HOM05D000762 ORTHO05D006179 5.7e-29 131.0 89 67.4
BcaB07g32811 Brassica carinata HOM05D000762 ORTHO05D006179 7.4e-29 130.6 77 74.0
CiPaw.11G076700 Carya illinoinensis HOM05D000762 ORTHO05D006179 7.4e-29 130.6 74 78.4
Haze_08030 Corylus avellana HOM05D000762 ORTHO05D006179 1.3e-28 129.8 74 78.4
RcHm_v2.0_Chr7g0214871 Rosa chinensis HOM05D000762 ORTHO05D006179 1.7e-28 129.4 72 79.2
BraA08t33051Z Brassica rapa HOM05D000762 ORTHO05D006179 2.2e-28 129.0 77 74.0
CSS0006761 Camellia sinensis var. sinensis HOM05D000762 ORTHO05D006179 2.2e-28 129.0 74 77.0
CSS0047392 Camellia sinensis var. sinensis HOM05D000762 ORTHO05D006179 2.2e-28 129.0 74 77.0
BcaC07g37754 Brassica carinata HOM05D000762 ORTHO05D006179 3.7e-28 128.3 77 74.0
A08p10520 Brassica napus HOM05D007105 ORTHO05D006179 3.7e-28 128.3 77 74.0
BolC8t48139H Brassica oleracea HOM05D000762 ORTHO05D006179 3.7e-28 128.3 77 74.0
Prupe.5G016000 Prunus persica HOM05D000762 ORTHO05D006179 3.7e-28 128.3 74 74.3
Sabra03G0072900 Salix brachista HOM05D000762 ORTHO05D006179 3.7e-28 128.3 74 77.0
Sp1g27300 Schrenkiella parvula HOM05D000762 ORTHO05D006179 3.7e-28 128.3 77 72.7
BcaB04g18149 Brassica carinata HOM05D000762 ORTHO05D006179 4.8e-28 127.9 77 71.4
TAR374G0039 Trochodendron aralioides HOM05D000762 ORTHO05D006179 4.8e-28 127.9 74 74.3
A09p34690 Brassica napus HOM05D000762 ORTHO05D006179 6.3e-28 127.5 77 74.0
HanXRQChr07g0204501 Helianthus annuus HOM05D000762 ORTHO05D006179 6.3e-28 127.5 74 74.3
Lj8A371G20 Lonicera japonica HOM05D000762 ORTHO05D006179 6.3e-28 127.5 78 74.4
Sc07g0008180 Simmondsia chinensis HOM05D000762 ORTHO05D006179 8.2e-28 127.1 74 74.3
Aa31LG2G14450 Aethionema arabicum HOM05D000762 ORTHO05D006179 1.1e-27 126.7 74 75.7
AL1G49550 Arabidopsis lyrata HOM05D000762 ORTHO05D006179 1.1e-27 126.7 74 74.3
FvH4_5g24460 Fragaria vesca HOM05D000762 ORTHO05D006179 1.4e-27 126.3 72 76.4
Thhalv10007841m.g Eutrema salsugineum HOM05D000762 ORTHO05D006179 1.8e-27 125.9 81 70.4
arahy.Tifrunner.gnm1.ann1.GB6XSM Arachis hypogaea HOM05D000762 ORTHO05D006179 2.4e-27 125.6 72 75.0
arahy.Tifrunner.gnm1.ann1.RB8GEU Arachis hypogaea HOM05D000762 ORTHO05D006179 2.4e-27 125.6 72 75.0
BcaC05g27179 Brassica carinata HOM05D000762 ORTHO05D006179 2.4e-27 125.6 77 74.0
C05p30750 Brassica napus HOM05D000762 ORTHO05D006179 2.4e-27 125.6 77 74.0
BolC5t31807H Brassica oleracea HOM05D000762 ORTHO05D006179 2.4e-27 125.6 77 74.0
Dinv09425 Davidia involucrata HOM05D000762 ORTHO05D006179 2.4e-27 125.6 89 66.3
FAN04G2135 Fragaria x ananassa HOM05D000762 ORTHO05D006179 2.4e-27 125.6 72 75.0
FAN08G1370 Fragaria x ananassa HOM05D000762 ORTHO05D006179 2.4e-27 125.6 72 75.0
FAN13G2277 Fragaria x ananassa HOM05D000762 ORTHO05D006179 2.4e-27 125.6 72 76.4
AT1G31500 Arabidopsis thaliana HOM05D000762 ORTHO05D006179 3.1e-27 125.2 73 75.3
Glyma.09G216700 Glycine max HOM05D000762 ORTHO05D006179 3.1e-27 125.2 74 73.0
MD16G1287200 Malus domestica HOM05D000762 ORTHO05D006179 3.1e-27 125.2 74 73.0
vmacro00115 Vaccinium macrocarpon HOM05D000762 ORTHO05D006179 3.1e-27 125.2 74 75.7
Lj2g0003478 Lotus japonicus HOM05D000762 ORTHO05D006179 4.1e-27 124.8 72 76.4
Rhsim11G0040700 Rhododendron simsii HOM05D000762 ORTHO05D006179 4.1e-27 124.8 72 76.4
Duzib114G0367 Durio zibethinus HOM05D000762 ORTHO05D006179 5.3e-27 124.4 74 75.7
FAN18G3726 Fragaria x ananassa HOM05D000762 ORTHO05D006179 6.9e-27 124.0 72 75.0
FAN13G3000 Fragaria x ananassa HOM05D000762 ORTHO05D006179 1.2e-26 123.2 72 75.0
Atru.chr6.2127 Acer truncatum HOM05D000762 ORTHO05D006179 1.5e-26 122.9 74 73.0
MSTRG.11843 Avicennia marina HOM05D000762 ORTHO05D006179 1.5e-26 122.9 89 67.4
QL12p002432 Quercus lobata HOM05D000762 ORTHO05D006179 1.5e-26 122.9 74 75.7
Lsat_1_v5_gn_8_24940 Lactuca sativa HOM05D000762 ORTHO05D006179 2.0e-26 122.5 74 68.9
SalBow4G2613 Salvia bowleyana HOM05D000762 ORTHO05D006179 3.4e-26 121.7 74 70.3
ECA233G0984 Erigeron canadensis HOM05D000762 ORTHO05D006179 4.5e-26 121.3 74 71.6
Potri.003G106000 Populus trichocarpa HOM05D000762 ORTHO05D006179 4.5e-26 121.3 74 73.0
AUR62007444 Chenopodium quinoa HOM05D000762 ORTHO05D006179 5.9e-26 120.9 76 69.7
VMungo1215G2102 Vigna mungo HOM05D000762 ORTHO05D006179 5.9e-26 120.9 74 70.3
MBI04_g30784_MAGBIO Magnolia biondii HOM05D000762 ORTHO05D006179 7.7e-26 120.6 74 71.6
Phvul.002G124000 Phaseolus vulgaris HOM05D000762 ORTHO05D006179 1.0e-25 120.2 74 68.9
Eucgr.D02578 Eucalyptus grandis HOM05D000762 ORTHO05D006179 1.3e-25 119.8 72 70.8
AUR62027292 Chenopodium quinoa HOM05D000762 ORTHO05D006179 1.7e-25 119.4 74 70.3
Migut.A00494 Erythranthe guttata HOM05D000762 ORTHO05D006179 1.7e-25 119.4 74 68.9
Nn1g09246 Nelumbo nucifera HOM05D000762 ORTHO05D006179 1.7e-25 119.4 74 73.0
Hund11080 Selenicereus undatus HOM05D000762 ORTHO05D006179 2.9e-25 118.6 77 66.2
TWI32G0449 Tripterygium wilfordii HOM05D000762 ORTHO05D006179 2.9e-25 118.6 74 68.9
Os05g0389500 Oryza sativa ssp. japonica HOM05D000762 ORTHO05D006179 5.0e-25 117.9 72 66.7
EL10Ac5g11870 Beta vulgaris HOM05D000762 ORTHO05D006179 6.5e-25 117.5 74 67.6
DCAR_030950 Daucus carota HOM05D000762 ORTHO05D006179 6.5e-25 117.5 74 68.9
PSO063G1071 Papaver somniferum HOM05D000762 ORTHO05D006179 6.5e-25 117.5 87 62.1
SHI33824 Sapria himalayana HOM05D000762 ORTHO05D006179 8.5e-25 117.1 86 61.6
SGA_v2.0_scaffold27G11724 Striga asiatica HOM05D000762 ORTHO05D006179 8.5e-25 117.1 74 70.3
Psat2g144120 Pisum sativum HOM05D000762 ORTHO05D006179 1.1e-24 116.7 72 69.4
Ciclev10001424m.g Citrus clementina HOM05D000762 ORTHO05D006179 2.5e-24 115.5 74 68.9
PGR031G0157 Punica granatum HOM05D000762 ORTHO05D006179 2.5e-24 115.5 74 68.9
Lalb_Chr16g0380531 Lupinus albus HOM05D000762 ORTHO05D006179 4.2e-24 114.8 72 70.8
Aqoxy3G01997 Aquilegia oxysepala HOM05D000762 ORTHO05D006179 9.4e-24 113.6 74 67.6
CDE11G1126 Ceratophyllum demersum HOM05D000762 ORTHO05D006179 9.4e-24 113.6 74 66.2
CANSAT11G0376 Cannabis sativa HOM05D000762 ORTHO05D006179 2.1e-23 112.5 83 63.9
Ca_25069_v3 Cicer arietinum L. HOM05D000762 ORTHO05D006179 2.1e-23 112.5 72 65.3
TPR.G30313 Trifolium pratense HOM05D000762 ORTHO05D006179 2.7e-23 112.1 72 65.3
Hma1.2p1_0262F.1_g105200 Hydrangea macrophylla HOM05D000762 ORTHO05D006179 1.0e-22 110.2 74 68.9
Hma1.2p1_0262F.1_g105210 Hydrangea macrophylla HOM05D000762 ORTHO05D006179 1.0e-22 110.2 74 68.9
Medtr5g026280 Medicago truncatula HOM05D000762 ORTHO05D006179 1.0e-22 110.2 72 63.9
HPP92_022767 Vanilla planifolia HOM05D000762 ORTHO05D006179 1.0e-22 110.2 72 62.5
Nitab4.5_0001132g0020 Nicotiana tabacum HOM05D000762 ORTHO05D006179 2.3e-22 109.0 74 64.9
Nitab4.5_0002799g0030 Nicotiana tabacum HOM05D000762 ORTHO05D006179 2.3e-22 109.0 72 68.1
Cc08_g04650 Coffea canephora HOM05D000762 ORTHO05D006179 3.0e-22 108.6 74 66.2
PGSC0003DMG401015717 Solanum tuberosum HOM05D000762 ORTHO05D006179 3.0e-22 108.6 74 64.9
Solyc08g075010.4 Solanum lycopersicum HOM05D000762 ORTHO05D006179 5.1e-22 107.8 74 64.9
Sopen08g023620 Solanum pennellii HOM05D000762 ORTHO05D006179 5.1e-22 107.8 74 64.9
TPR.G30319 Trifolium pratense HOM05D000762 ORTHO05D006179 7.4e-21 104.0 72 61.1
AagrBONN_evm.TU.Sc2ySwM_344.1125 Anthoceros agrestis HOM05D000762 ORTHO05D006179 3.7e-20 101.7 77 58.4
unitig_899.g14971 Utricularia gibba HOM05D000351 ORTHO05D006179 3.7e-20 101.7 77 59.7
ATR0568G206 Amborella trichopoda HOM05D000762 ORTHO05D006179 4.8e-20 101.3 74 55.4
SMO167G0012 Selaginella moellendorffii HOM05D000762 ORTHO05D006179 2.6e-18 95.5 74 54.1
CARHR287020 Cardamine hirsuta HOM05D000762 ORTHO05D006179 7.7e-18 94.0 73 67.1
SMO347G0652 Selaginella moellendorffii HOM05D000762 ORTHO05D006179 1.0e-17 93.6 72 55.6
Glyma.01G151466 Glycine max HOM05D000762 ORTHO05D006179 1.9e-16 89.4 51 72.5
Cpa.g.sc24.94 Carica papaya HOM05D000762 ORTHO05D006179 3.2e-16 88.6 50 82.0
Pp3c22_8300 Physcomitrium patens HOM05D000762 ORTHO05D006179 5.5e-16 87.8 72 51.4
SHI53217 Sapria himalayana HOM05D000762 ORTHO05D006179 7.2e-16 87.4 74 52.7
SHI53758 Sapria himalayana HOM05D000762 ORTHO05D006179 7.2e-16 87.4 74 52.7
SHI53852 Sapria himalayana HOM05D000762 ORTHO05D006179 7.2e-16 87.4 74 52.7
SHI54089 Sapria himalayana HOM05D000762 ORTHO05D006179 7.2e-16 87.4 74 52.7
Ca_18033_v3 Cicer arietinum L. HOM05D000762 ORTHO05D006179 1.6e-15 86.3 51 70.6
Atru.BG.144.p Acer truncatum HOM05D000762 ORTHO05D006179 2.1e-15 85.9 65 58.5
Peaxi162Scf00157g01314 Petunia axillaris HOM05D000762 ORTHO05D006179 3.6e-15 85.1 51 74.5
AL1G49510 Arabidopsis lyrata HOM05D000762 ORTHO05D006179 3.9e-14 81.6 74 55.4
CBR_g57848 Chara braunii HOM05D000762 ORTHO05D006179 2.0e-13 79.3 70 50.0
AT1G31530 Arabidopsis thaliana HOM05D000762 ORTHO05D006179 1.3e-12 76.6 71 52.1
Mapoly0010s0066 Marchantia polymorpha HOM05D000762 ORTHO05D006179 1.3e-12 76.6 72 50.0
MCO05G456 Micromonas commoda HOM05D000762 ORTHO05D006179 1.5e-08 63.2 61 52.5
SHI33058 Sapria himalayana HOM05D000762 ORTHO05D006179 1.5e-08 63.2 51 56.9
SHI47635 Sapria himalayana HOM05D000762 ORTHO05D006179 1.9e-08 62.8 49 59.2
SHI48355 Sapria himalayana HOM05D000762 ORTHO05D006179 1.9e-08 62.8 49 59.2


User provided reference genes

Program Settings