Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 5.5e-138 494.6 306 100.0
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 3.4e-135 485.3 306 94.1
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 6.1e-129 464.5 306 94.1
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 4.9e-110 401.7 306 80.4
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 2.4e-96 356.3 302 65.2
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.2e-95 354.0 296 66.9
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 2.6e-95 352.8 301 65.8
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 4.4e-95 352.1 302 65.2
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 5.8e-95 351.7 267 70.4
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 7.6e-95 351.3 301 67.1
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 6.4e-94 348.2 307 73.0
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.4e-93 347.1 306 65.0
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.9e-93 346.7 301 64.5
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.9e-93 346.7 299 64.9
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 2.4e-93 346.3 303 74.9
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 7.1e-93 344.7 299 64.5
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 9.2e-93 344.4 306 66.7
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 1.2e-92 344.0 269 71.4
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.2e-92 344.0 269 71.4
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 1.2e-92 344.0 268 71.3
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 2.1e-92 343.2 305 68.2
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 4.6e-92 342.0 302 62.3
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.0e-91 340.9 301 64.1
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.3e-91 339.7 301 65.1
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 3.0e-91 339.3 269 70.3
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 3.0e-91 339.3 301 61.8
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 3.0e-91 339.3 269 70.3
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 3.9e-91 339.0 299 64.2
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.9e-91 339.0 306 63.4
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 5.1e-91 338.6 301 64.5
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 1.9e-90 336.7 308 63.6
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 2.5e-90 336.3 309 62.8
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 4.3e-90 335.5 333 59.8
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 2.8e-89 332.8 302 62.6
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 2.8e-89 332.8 268 69.0
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 1.1e-88 330.9 307 62.2
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 2.4e-88 329.7 301 61.1
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 2.4e-88 329.7 301 60.8
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 6.9e-88 328.2 303 64.4
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 2.6e-87 326.2 301 62.5
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 2.6e-87 326.2 301 68.1
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 4.4e-87 325.5 304 61.2
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 7.6e-87 324.7 301 60.8
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 7.6e-87 324.7 302 62.9
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.3e-86 323.9 303 63.0
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 1.7e-86 323.6 301 67.1
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.9e-86 322.8 303 64.4
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 3.8e-86 322.4 305 60.3
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.1e-85 320.9 301 61.8
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 4.2e-85 318.9 301 65.4
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 9.3e-85 317.8 205 79.0
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 1.6e-84 317.0 309 60.8
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.6e-84 317.0 303 61.7
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.6e-84 317.0 300 61.0
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 2.1e-84 316.6 303 59.4
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 4.6e-84 315.5 300 59.3
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 4.6e-84 315.5 303 59.4
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 6.0e-84 315.1 300 61.3
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 7.8e-84 314.7 304 61.2
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.0e-83 314.3 302 59.9
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.7e-83 313.5 262 69.8
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 1.7e-83 313.5 305 59.3
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 2.3e-83 313.2 299 58.9
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 6.6e-83 311.6 303 60.7
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 1.9e-82 310.1 303 60.4
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 1.9e-82 310.1 303 60.4
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 5.6e-82 308.5 301 56.8
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 7.3e-82 308.1 303 60.1
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 9.6e-82 307.8 305 60.0
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 3.6e-81 305.8 306 60.1
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 4.8e-81 305.4 300 58.0
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.8e-81 305.4 300 58.0
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 4.8e-81 305.4 302 60.6
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 4.8e-81 305.4 301 58.5
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 8.1e-81 304.7 300 58.0
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 8.1e-81 304.7 201 77.1
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 2.4e-80 303.1 310 56.8
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.0e-80 302.4 302 58.3
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 9.0e-80 301.2 308 56.2
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 9.9e-79 297.7 301 56.8
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 9.9e-79 297.7 339 57.8
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.2e-78 296.6 306 57.5
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.2e-78 296.6 306 57.5
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.2e-76 290.8 331 53.8
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 6.7e-75 285.0 300 57.7
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 7.4e-74 281.6 180 78.9
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 3.7e-73 279.3 310 53.9
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 8.1e-73 278.1 311 56.3
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 1.8e-72 276.9 297 54.2
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.4e-72 276.6 303 59.7
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 4.0e-72 275.8 263 59.7
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 6.4e-70 268.5 335 50.7
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.1e-69 267.7 173 78.6
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 9.3e-69 264.6 303 53.8
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 4.6e-68 262.3 284 54.9
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 3.9e-67 259.2 173 78.0
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 4.3e-66 255.8 304 50.7
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 4.8e-65 252.3 306 55.9
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 6.2e-65 251.9 305 52.8
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 1.2e-60 237.7 424 39.2
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 1.2e-55 221.1 306 47.7
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 7.7e-55 218.4 303 47.9
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 3.3e-50 203.0 133 78.9
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 9.7e-50 201.4 249 48.6
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 7.2e-45 185.3 158 65.2
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 2.4e-40 170.2 192 53.1
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 2.6e-39 166.8 132 70.5
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 1.3e-38 164.5 181 55.8
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 3.1e-32 143.3 160 53.1
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 2.9e-30 136.7 171 50.3
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 6.8e-27 125.6 169 47.3
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 4.4e-26 122.9 77 79.2
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.5e-21 107.8 136 47.1
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 5.4e-16 89.4 126 44.4
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.5e-13 81.3 128 43.0
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 3.3e-13 80.1 130 44.6
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 2.1e-12 77.4 128 43.8
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 2.9e-09 67.0 72 56.9
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 5.4e-08 62.8 42 66.7
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 4.6e-07 59.7 131 40.5


User provided reference genes

Program Settings