Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 5.7e-92 340.9 172 100.0
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 3.2e-82 308.5 170 91.8
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 3.1e-77 292.0 172 88.4
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 2.8e-70 268.9 176 79.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 9.0e-45 184.1 152 64.5
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 3.4e-44 182.2 150 62.7
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 5.8e-44 181.4 168 58.3
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.3e-43 180.3 178 57.9
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 1.7e-43 179.9 151 62.9
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.7e-43 179.9 168 58.3
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 2.2e-43 179.5 154 60.4
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 3.8e-43 178.7 177 55.9
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 4.9e-43 178.3 150 63.3
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 4.9e-43 178.3 150 63.3
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 6.4e-43 177.9 152 61.2
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 6.4e-43 177.9 151 61.6
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.9e-42 176.4 150 62.7
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 5.5e-42 174.9 161 59.0
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 5.5e-42 174.9 176 59.1
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 7.1e-42 174.5 150 60.0
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 7.1e-42 174.5 150 60.0
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 1.2e-41 173.7 157 62.4
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 2.1e-41 172.9 158 58.9
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 6.0e-41 171.4 152 59.9
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 6.0e-41 171.4 151 60.3
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 7.9e-41 171.0 150 60.0
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.0e-40 170.6 171 54.4
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.0e-40 170.6 148 61.5
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 1.0e-40 170.6 155 57.4
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 1.3e-40 170.2 157 58.6
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 1.3e-40 170.2 155 60.0
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 1.8e-40 169.9 171 58.5
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 6.7e-40 167.9 170 54.1
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.9e-39 166.4 157 59.9
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 3.3e-39 165.6 177 53.7
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 4.3e-39 165.2 178 56.2
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 5.6e-39 164.9 151 57.6
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 9.6e-39 164.1 169 54.4
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 1.3e-38 163.7 150 58.0
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 2.8e-38 162.5 150 56.7
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.1e-37 160.6 155 57.4
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 1.1e-37 160.6 173 50.9
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 1.1e-37 160.6 152 58.6
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.1e-37 160.6 159 54.1
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.4e-37 160.2 159 56.6
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.8e-37 159.8 149 57.7
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.8e-37 159.8 169 56.2
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.1e-37 159.1 158 56.3
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 3.1e-37 159.1 172 54.7
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 4.0e-37 158.7 170 52.4
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 5.3e-37 158.3 135 59.3
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 5.3e-37 158.3 168 55.4
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 6.9e-37 157.9 160 52.5
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 6.9e-37 157.9 171 52.6
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 9.0e-37 157.5 171 53.8
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.6e-36 156.0 159 55.3
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 3.4e-36 155.6 157 54.8
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 5.8e-36 154.8 147 55.1
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 5.8e-36 154.8 162 50.6
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 5.8e-36 154.8 172 51.7
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 5.8e-36 154.8 149 58.4
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 7.6e-36 154.5 149 53.0
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.3e-35 153.7 155 54.8
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.7e-35 153.3 147 54.4
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.7e-35 153.3 157 54.1
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.2e-35 152.9 155 54.8
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.9e-35 152.5 146 55.5
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.9e-35 152.5 146 55.5
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 3.8e-35 152.1 150 58.0
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 4.9e-35 151.8 140 55.7
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 6.5e-35 151.4 142 56.3
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 6.5e-35 151.4 149 57.0
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 8.4e-35 151.0 162 49.4
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.1e-34 150.6 147 53.7
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.1e-34 150.6 162 49.4
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.1e-34 150.6 150 52.7
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.1e-34 150.6 152 56.6
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.4e-34 150.2 149 57.0
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.9e-34 149.8 149 53.7
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 2.5e-34 149.4 153 55.6
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 2.5e-34 149.4 178 44.9
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 3.2e-34 149.1 163 50.9
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 4.2e-34 148.7 160 51.9
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 1.2e-33 147.1 150 51.3
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 4.6e-33 145.2 146 51.4
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 1.0e-32 144.1 168 53.6
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 1.3e-32 143.7 171 48.5
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 2.3e-32 142.9 135 56.3
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 2.3e-32 142.9 116 62.9
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.1e-31 140.6 181 43.6
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 5.7e-31 138.3 176 46.6
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 7.4e-31 137.9 139 56.1
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 9.7e-31 137.5 147 52.4
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 2.2e-30 136.3 131 57.3
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.2e-30 136.3 151 47.0
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 8.2e-30 134.4 140 55.0
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 7.6e-28 127.9 135 48.1
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.2e-27 126.3 121 54.5
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 2.2e-27 126.3 113 57.5
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 2.9e-27 125.9 142 53.5
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 2.9e-27 125.9 165 47.3
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 5.0e-27 125.2 159 49.1
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 9.3e-26 120.9 150 49.3
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.5e-23 113.6 136 47.1
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 4.8e-22 108.6 112 50.0
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 3.4e-20 102.4 100 53.0
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.9e-18 96.7 86 54.7
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 1.9e-18 96.7 73 61.6
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 1.1e-13 80.9 171 34.5
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 7.7e-12 74.7 137 34.3
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 5.0e-11 72.0 102 42.2
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 1.4e-10 70.5 66 57.6


User provided reference genes

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