Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 0.0e+00 1325.8 787 100.0
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 0.0e+00 1249.2 787 95.2
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 0.0e+00 1145.6 803 87.3
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 2.3e-212 743.0 569 84.5
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 2.7e-168 596.7 739 57.8
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 1.9e-166 590.5 787 55.3
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 8.0e-165 585.1 679 49.8
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 6.8e-164 582.0 787 54.3
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.2e-163 581.3 901 50.1
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.4e-161 574.3 709 56.7
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.8e-161 573.9 709 56.4
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.6e-160 570.9 709 56.4
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 8.6e-159 565.1 678 48.5
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.1e-158 564.7 676 47.9
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 9.5e-158 561.6 791 53.1
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 2.8e-157 560.1 766 54.4
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 3.7e-154 549.7 798 52.6
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 3.2e-153 546.6 782 52.6
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.7e-152 543.5 674 47.5
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 6.0e-152 542.3 795 52.2
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 7.8e-152 542.0 724 55.7
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 8.0e-149 531.9 724 53.9
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 3.1e-148 530.0 714 53.8
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.7e-146 524.2 685 45.5
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 4.9e-146 522.7 711 52.0
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 6.4e-146 522.3 789 49.3
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 4.6e-144 516.2 681 56.5
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 1.5e-142 511.1 751 52.7
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.5e-142 510.4 741 43.3
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 3.3e-142 510.0 756 52.4
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 4.3e-142 509.6 740 52.7
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 1.2e-141 508.1 712 53.7
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.6e-141 507.7 634 47.8
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 1.6e-141 507.7 615 48.3
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 2.8e-141 506.9 681 46.0
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 6.2e-141 505.8 674 44.7
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 8.1e-141 505.4 741 52.9
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 5.8e-139 499.2 725 51.7
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 1.4e-137 494.6 706 53.7
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 2.4e-137 493.8 813 46.4
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 1.1e-132 478.4 701 51.6
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 1.1e-132 478.4 724 48.3
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 2.4e-132 477.2 522 50.8
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 3.1e-132 476.9 717 48.3
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 5.8e-131 472.6 823 47.1
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 7.1e-129 465.7 639 55.9
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 1.3e-127 461.5 629 54.5
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 2.5e-126 457.2 727 48.6
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 5.6e-126 456.1 662 55.4
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 2.8e-125 453.8 796 47.5
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 2.0e-123 447.6 605 43.6
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.6e-117 427.9 750 46.3
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 3.1e-116 423.7 611 40.8
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 4.0e-116 423.3 728 47.7
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 5.3e-116 422.9 756 47.5
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 8.4e-114 415.6 717 47.6
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 7.1e-113 412.5 724 47.9
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 1.2e-112 411.8 718 46.2
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 3.5e-112 410.2 648 40.1
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 4.6e-112 409.8 709 45.8
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 6.0e-112 409.5 699 46.8
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 1.5e-110 404.8 708 48.4
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.9e-110 404.4 692 48.4
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.3e-109 401.7 700 48.1
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 4.8e-109 399.8 705 48.7
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.4e-108 397.5 670 45.2
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 6.9e-108 396.0 473 48.0
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 2.6e-107 394.0 706 48.4
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 5.8e-107 392.9 708 47.0
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 7.6e-107 392.5 662 49.1
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 4.9e-106 389.8 732 47.3
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 1.1e-105 388.7 672 47.2
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 1.9e-105 387.9 772 43.8
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 9.3e-105 385.6 719 45.3
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 2.7e-104 384.0 704 46.0
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 8.7e-103 379.0 714 45.5
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 3.1e-100 370.5 723 44.8
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 9.0e-100 369.0 649 39.3
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 1.1e-97 362.1 474 44.5
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 3.7e-93 347.1 553 54.2
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 2.0e-91 341.3 635 47.2
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 2.5e-81 307.8 640 43.3
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 2.1e-80 304.7 696 42.2
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 6.7e-79 299.7 593 34.9
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 2.0e-78 298.1 548 47.4
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 4.5e-75 287.0 481 37.0
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 6.1e-72 276.6 581 43.9
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 8.8e-63 246.1 588 34.9
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 9.1e-60 236.1 698 36.5
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 6.5e-58 229.9 237 46.0
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 8.3e-53 213.0 339 43.7
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 1.7e-50 205.3 209 50.2
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.6e-48 198.7 451 49.0
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 2.8e-48 198.0 510 32.0
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.4e-46 191.0 337 38.0
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 4.7e-40 170.6 472 32.0
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 4.7e-40 170.6 653 26.0
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 2.0e-38 165.2 417 48.0
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.4e-36 159.1 175 48.6
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 2.9e-29 134.8 206 40.8
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 6.2e-24 117.1 295 35.3
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 8.3e-21 106.7 160 41.2
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 1.6e-19 102.4 259 30.9
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 5.1e-18 97.4 221 38.0
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 5.1e-18 97.4 77 62.3
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 9.6e-17 93.2 132 48.5
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 1.2e-16 92.8 83 51.8
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 2.0e-14 85.5 84 53.6
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.1e-12 79.7 46 73.9
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 9.3e-12 76.6 81 48.1
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 1.6e-11 75.9 119 37.8
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 2.1e-11 75.5 127 38.6
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 4.3e-09 67.8 265 27.9
Ah.02g120100 Amaranthus hybridus HOM05D006757 ORTHO05D004651 1.2e-06 59.7 65 47.7
Hma1.2p1_0933F.1_g238390 Hydrangea macrophylla HOM05D006757 ORTHO05D034208 2.0e-06 58.9 121 39.7


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