Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G015010 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.2e-53 213.0 110 100.0
VMungo1127G0557 Vigna mungo HOM05D000684 ORTHO05D000688 6.4e-12 74.3 135 35.6
CsaV3_5G024630 Cucumis sativus L. HOM05D000002 ORTHO05D000001 3.5e-10 68.6 47 78.7
Duzib211G0111 Durio zibethinus HOM05D000002 ORTHO05D000001 3.5e-10 68.6 47 76.6
Duzib138G1479 Durio zibethinus HOM05D000002 ORTHO05D000001 1.0e-09 67.0 47 74.5
Duzib168G2179 Durio zibethinus HOM05D000002 ORTHO05D000001 3.3e-08 62.0 47 72.3
PGSC0003DMG400016677 Solanum tuberosum HOM05D000002 ORTHO05D000001 5.6e-08 61.2 47 66.0
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 7.3e-08 60.8 47 66.0
VMungo1127G0211 Vigna mungo HOM05D000013 ORTHO05D000011 7.3e-08 60.8 47 68.1
CSS0008377 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-07 59.7 47 61.7
CSS0031737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-07 59.7 47 61.7
CSS0037302 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-07 59.7 47 61.7
CSS0040477 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-07 59.7 47 61.7
Sopen09g027810 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-07 59.3 63 49.2
CAN.G27.29 Capsicum annuum HOM05D001659 ORTHO05D001659 4.8e-07 58.2 67 46.3
PGSC0003DMG400006637 Solanum tuberosum HOM05D000002 ORTHO05D000001 6.2e-07 57.8 40 67.5
CAN.G1744.9 Capsicum annuum HOM05D000011 ORTHO05D001721 8.1e-07 57.4 41 65.9
Lj3g0008931 Lotus japonicus HOM05D000002 ORTHO05D000001 8.1e-07 57.4 40 70.0
PGR129G0010 Punica granatum HOM05D000002 ORTHO05D000001 8.1e-07 57.4 42 64.3
PGR142G1863 Punica granatum HOM05D000002 ORTHO05D000001 8.1e-07 57.4 42 64.3
Psat7g185520 Pisum sativum HOM05D000002 ORTHO05D000001 1.4e-06 56.6 47 59.6
Duzib106G0529 Durio zibethinus HOM05D000002 ORTHO05D000001 1.8e-06 56.2 47 63.8
PGR004G1580 Punica granatum HOM05D000002 ORTHO05D000001 1.8e-06 56.2 42 61.9
PGR102G0886 Punica granatum HOM05D000002 ORTHO05D000001 2.4e-06 55.8 42 61.9
CAN.G1337.33 Capsicum annuum HOM05D001608 ORTHO05D002070 4.0e-06 55.1 47 57.4
CAN.G286.1 Capsicum annuum HOM05D000071 ORTHO05D000029 5.3e-06 54.7 40 65.0
CAN.G694.52 Capsicum annuum HOM05D000264 ORTHO05D000152 5.3e-06 54.7 47 59.6
Sopen11g017730 Solanum pennellii HOM05D000006 ORTHO05D000001 9.0e-06 53.9 126 29.4


User provided reference genes

Program Settings