Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G012950 Cucumis sativus L. HOM05D008187 ORTHO05D009830 9.3e-62 240.0 116 100.0
MELO3C020063.2 Cucumis melo HOM05D008187 ORTHO05D009830 5.6e-59 230.7 116 94.0
ClCG11G000980 Citrullus lanatus HOM05D008187 ORTHO05D009830 7.1e-54 213.8 116 88.8
Sed0002824 Sechium edule HOM05D008187 ORTHO05D009830 3.0e-36 155.2 122 68.0
CiPaw.05G158900 Carya illinoinensis HOM05D008187 ORTHO05D009830 5.2e-20 101.3 119 53.8
Thecc.02G303500 Theobroma cacao HOM05D008187 ORTHO05D009830 2.8e-18 95.5 117 48.7
QL03p039185 Quercus lobata HOM05D008187 ORTHO05D009830 6.3e-18 94.4 128 50.0
Dinv08898 Davidia involucrata HOM05D008187 ORTHO05D009830 1.1e-17 93.6 120 48.3
Ciclev10016789m.g Citrus clementina HOM05D008187 ORTHO05D009830 1.4e-17 93.2 130 40.8
COL.COLO4_27577 Corchorus olitorius HOM05D008187 ORTHO05D009830 3.1e-17 92.0 118 50.0
GSVIVG01011592001 Vitis vinifera HOM05D008187 ORTHO05D009830 7.0e-17 90.9 121 46.3
CiPaw.06G058400 Carya illinoinensis HOM05D008187 ORTHO05D009830 2.0e-16 89.4 123 48.0
MD13G1015500 Malus domestica HOM05D008187 ORTHO05D009830 3.5e-16 88.6 127 43.3
Manes.15G138900 Manihot esculenta HOM05D008187 ORTHO05D009830 3.5e-16 88.6 119 48.7
Psat7g085360 Pisum sativum HOM05D008187 ORTHO05D009830 4.5e-16 88.2 122 48.4
Ca_18193_v3 Cicer arietinum L. HOM05D008187 ORTHO05D009830 5.9e-16 87.8 121 47.9
Lalb_Chr07g0187941 Lupinus albus HOM05D008187 ORTHO05D009830 5.9e-16 87.8 120 44.2
Dinv20504 Davidia involucrata HOM05D008187 ORTHO05D009830 1.0e-15 87.0 121 47.9
Dinv20537 Davidia involucrata HOM05D008187 ORTHO05D009830 1.0e-15 87.0 121 47.9
FAN12G2367 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.3e-15 86.7 127 46.5
Lj4g0022895 Lotus japonicus HOM05D008187 ORTHO05D009830 1.3e-15 86.7 119 47.9
VMungo0251G0444 Vigna mungo HOM05D008187 ORTHO05D009830 2.2e-15 85.9 120 45.8
TWI74G1547 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 2.9e-15 85.5 119 43.7
FAN07G0781 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.8e-15 85.1 127 45.7
FvH4_4g26140 Fragaria vesca HOM05D008187 ORTHO05D009830 5.0e-15 84.7 127 45.7
FAN12G2898 Fragaria x ananassa HOM05D008187 ORTHO05D009830 5.0e-15 84.7 127 45.7
Phvul.002G184100 Phaseolus vulgaris HOM05D008187 ORTHO05D009830 5.0e-15 84.7 117 48.7
FAN17G0865 Fragaria x ananassa HOM05D008187 ORTHO05D009830 8.5e-15 84.0 127 45.7
Glyma.05G137300 Glycine max HOM05D008187 ORTHO05D009830 8.5e-15 84.0 118 47.5
Glyma.08G092600 Glycine max HOM05D008187 ORTHO05D009830 8.5e-15 84.0 120 46.7
Hma1.2p1_0441F.1_g153840 Hydrangea macrophylla HOM05D008187 ORTHO05D009830 8.5e-15 84.0 128 38.3
Potri.010G101500 Populus trichocarpa HOM05D008187 ORTHO05D009830 8.5e-15 84.0 122 41.8
FAN22G0157 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.1e-14 83.6 127 44.9
arahy.Tifrunner.gnm1.ann1.61TZTK Arachis hypogaea HOM05D008187 ORTHO05D009830 1.5e-14 83.2 119 42.9
arahy.Tifrunner.gnm1.ann1.FUMC5T Arachis hypogaea HOM05D008187 ORTHO05D009830 1.5e-14 83.2 119 42.9
CSS0005647 Camellia sinensis var. sinensis HOM05D008187 ORTHO05D009830 5.5e-14 81.3 120 46.7
Potri.008G140000 Populus trichocarpa HOM05D008187 ORTHO05D009830 7.2e-14 80.9 123 40.7
Sabra10G0074300 Salix brachista HOM05D008187 ORTHO05D009830 9.4e-14 80.5 123 40.7
Manes.17G089700 Manihot esculenta HOM05D008187 ORTHO05D009830 4.7e-13 78.2 115 45.2
Atru.chr11.1001 Acer truncatum HOM05D008187 ORTHO05D009830 1.8e-12 76.3 127 40.2
Sabra08G0106100 Salix brachista HOM05D008187 ORTHO05D009830 1.8e-12 76.3 119 42.0
Prupe.1G338300 Prunus persica HOM05D008187 ORTHO05D009830 5.2e-12 74.7 127 39.4
TAR622G0296 Trochodendron aralioides HOM05D008187 ORTHO05D009830 5.2e-12 74.7 117 45.3
Eucgr.B02651 Eucalyptus grandis HOM05D008187 ORTHO05D009830 6.8e-12 74.3 118 40.7
Gorai.012G183500 Gossypium raimondii HOM05D008187 ORTHO05D009830 1.2e-11 73.6 117 41.9
CANSAT78G2356 Cannabis sativa HOM05D008187 ORTHO05D009830 2.6e-11 72.4 135 37.0
Gohir.D04G188100 Gossypium hirsutum HOM05D008187 ORTHO05D009830 3.4e-11 72.0 116 41.4
MBI19_g01917_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D009830 2.2e-10 69.3 117 45.3
Gohir.A04G143800 Gossypium hirsutum HOM05D008187 ORTHO05D009830 3.7e-10 68.6 116 40.5
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 8.3e-10 67.4 122 39.3
Lj6A731T87 Lonicera japonica HOM05D008187 ORTHO05D009830 1.1e-09 67.0 121 36.4
FAN17G0113 Fragaria x ananassa HOM05D008187 ORTHO05D009830 2.4e-09 65.9 90 46.7
HanXRQChr16g0527611 Helianthus annuus HOM05D008187 ORTHO05D009830 2.4e-09 65.9 126 37.3
MD16G1013000 Malus domestica HOM05D008187 ORTHO05D009830 3.1e-09 65.5 127 36.2
Rhsim09G0085300 Rhododendron simsii HOM05D008187 ORTHO05D009830 3.1e-09 65.5 120 38.3
Lsat_1_v5_gn_4_24181 Lactuca sativa HOM05D008187 ORTHO05D009830 2.0e-08 62.8 112 38.4
Actinidia34059 Actinidia chinensis HOM05D008187 ORTHO05D009830 1.0e-07 60.5 122 37.7
BcaC04g21548 Brassica carinata HOM05D010619 ORTHO05D009830 6.6e-07 57.8 120 33.3
TPR.G11831 Trifolium pratense HOM05D008187 ORTHO05D009830 6.6e-07 57.8 74 44.6
THA.LOC104805100 Tarenaya hassleriana HOM05D010619 ORTHO05D009830 8.6e-07 57.4 124 37.1
DCAR_023540 Daucus carota HOM05D008187 ORTHO05D009830 1.5e-06 56.6 110 39.1
DCAR_026822 Daucus carota HOM05D008187 ORTHO05D009830 1.5e-06 56.6 130 34.6
Actinidia38421 Actinidia chinensis HOM05D008187 ORTHO05D009830 1.9e-06 56.2 77 45.5
C09p30500 Brassica napus HOM05D010619 ORTHO05D009830 1.9e-06 56.2 120 32.5
HanXRQChr17g0566281 Helianthus annuus HOM05D008187 ORTHO05D009830 1.9e-06 56.2 75 37.3
Sp2g13350 Schrenkiella parvula HOM05D010619 ORTHO05D009830 3.3e-06 55.5 111 34.2
AT2G01913 Arabidopsis thaliana HOM05D010619 ORTHO05D009830 4.2e-06 55.1 118 33.9
BolC9t55912H Brassica oleracea HOM05D010619 ORTHO05D009830 4.2e-06 55.1 119 32.8
BcaB07g30724 Brassica carinata HOM05D010619 ORTHO05D009830 7.2e-06 54.3 124 31.5


User provided reference genes

Program Settings