Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G011100 Cucumis sativus L. HOM05D007120 ORTHO05D008881 1.9e-33 145.2 69 100.0
Sed0014987 Sechium edule HOM05D007120 ORTHO05D008881 1.8e-20 102.1 67 76.1
RcHm_v2.0_Chr1g0372461 Rosa chinensis HOM05D007120 ORTHO05D008881 4.9e-10 67.4 55 56.4
CiPaw.14G049800 Carya illinoinensis HOM05D007120 ORTHO05D008881 6.4e-10 67.0 45 68.9
Gohir.A13G007800 Gossypium hirsutum HOM05D007120 ORTHO05D008881 6.4e-10 67.0 48 62.5
RcHm_v2.0_Chr7g0235281 Rosa chinensis HOM05D007120 ORTHO05D008881 1.1e-09 66.2 55 54.5
RcHm_v2.0_Chr7g0235311 Rosa chinensis HOM05D007120 ORTHO05D008881 1.1e-09 66.2 55 54.5
Gorai.013G008400 Gossypium raimondii HOM05D007120 ORTHO05D008881 1.9e-09 65.5 48 62.5
Gohir.D13G008000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 4.2e-09 64.3 48 60.4
Gohir.A06G180100 Gossypium hirsutum HOM05D007120 ORTHO05D008881 2.1e-08 62.0 48 58.3
Gohir.D06G187000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 2.1e-08 62.0 48 58.3
Gorai.010G219300 Gossypium raimondii HOM05D007120 ORTHO05D008881 2.1e-08 62.0 48 58.3
Thecc.10G184500 Theobroma cacao HOM05D007120 ORTHO05D008881 2.1e-08 62.0 48 58.3
Cfa011840 Carpinus fangiana HOM05D007120 ORTHO05D008881 4.6e-08 60.8 42 66.7
Lj1A968T57 Lonicera japonica HOM05D007120 ORTHO05D008881 6.0e-08 60.5 45 60.0
Manes.07G142200 Manihot esculenta HOM05D007120 ORTHO05D008881 6.0e-08 60.5 60 48.3
Potri.019G059500 Populus trichocarpa HOM05D007120 ORTHO05D008881 6.0e-08 60.5 48 58.3
TAR369G0939 Trochodendron aralioides HOM05D007120 ORTHO05D008881 1.0e-07 59.7 45 62.2
GSVIVG01032659001 Vitis vinifera HOM05D007120 ORTHO05D008881 1.0e-07 59.7 44 61.4
FvH4_7g26050 Fragaria vesca HOM05D007120 ORTHO05D008881 1.3e-07 59.3 56 53.6
FAN10G2835 Fragaria x ananassa HOM05D007120 ORTHO05D008881 1.3e-07 59.3 56 53.6
Duzib128G0262 Durio zibethinus HOM05D007120 ORTHO05D008881 1.8e-07 58.9 44 59.1
FAN03G2745 Fragaria x ananassa HOM05D007120 ORTHO05D008881 3.0e-07 58.2 55 54.5
MD07G1234900 Malus domestica HOM05D007120 ORTHO05D008881 3.0e-07 58.2 48 52.1
CANSAT56G4069 Cannabis sativa HOM05D007120 ORTHO05D008881 3.9e-07 57.8 48 56.2
MBI15_g39383_MAGBIO Magnolia biondii HOM05D007120 ORTHO05D008881 3.9e-07 57.8 49 57.1
Oeu006064.1 Olea europaea HOM05D007120 ORTHO05D008881 3.9e-07 57.8 52 48.1
Cfa001199 Carpinus fangiana HOM05D007120 ORTHO05D008881 5.1e-07 57.4 44 61.4
Haze_17366 Corylus avellana HOM05D006907 ORTHO05D008598 6.7e-07 57.0 45 57.8
Carub.0004s2306 Capsella rubella HOM05D007120 ORTHO05D008881 8.7e-07 56.6 48 54.2
CiPaw.09G151000 Carya illinoinensis HOM05D007120 ORTHO05D008881 8.7e-07 56.6 46 54.3
Nn2g10275 Nelumbo nucifera HOM05D007120 ORTHO05D008881 1.5e-06 55.8 45 60.0
MD01G1169000 Malus domestica HOM05D007120 ORTHO05D008881 2.5e-06 55.1 48 50.0
Nn5g26831 Nelumbo nucifera HOM05D007120 ORTHO05D008881 2.5e-06 55.1 55 54.5
BcaB01g03516 Brassica carinata HOM05D007120 ORTHO05D008881 3.3e-06 54.7 51 51.0
A03p22930 Brassica napus HOM05D007120 ORTHO05D008881 3.3e-06 54.7 51 51.0
BolC3t15101H Brassica oleracea HOM05D007120 ORTHO05D008881 3.3e-06 54.7 51 51.0
BraA03t11516Z Brassica rapa HOM05D007120 ORTHO05D008881 3.3e-06 54.7 51 51.0
ATR1127G135 Amborella trichopoda HOM05D007120 ORTHO05D008881 4.3e-06 54.3 49 49.0
Manes.10G002800 Manihot esculenta HOM05D007120 ORTHO05D008881 4.3e-06 54.3 59 40.7
Atru.chr12.199 Acer truncatum HOM05D007120 ORTHO05D008881 5.6e-06 53.9 44 54.5
Cc02_g05250 Coffea canephora HOM05D007120 ORTHO05D008881 5.6e-06 53.9 52 50.0
Peaxi162Scf00073g02342 Petunia axillaris HOM05D007120 ORTHO05D008881 5.6e-06 53.9 53 49.1
Sp4g23080 Schrenkiella parvula HOM05D007120 ORTHO05D008881 5.6e-06 53.9 45 53.3
CSS0015321 Camellia sinensis var. sinensis HOM05D007120 ORTHO05D008881 9.6e-06 53.1 44 54.5
Hma1.2p1_0264F.1_g105975 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 9.6e-06 53.1 45 62.2
Hma1.2p1_1805F.1_g303200 Hydrangea macrophylla HOM05D007120 ORTHO05D008881 9.6e-06 53.1 45 62.2


User provided reference genes

Program Settings