Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G011070 Cucumis sativus L. HOM05D000405 ORTHO05D000712 1.3e-48 196.1 99 100.0
MELO3C020162.2 Cucumis melo HOM05D000405 ORTHO05D000712 4.7e-38 161.0 101 87.1
ClCG07G005220 Citrullus lanatus HOM05D000405 ORTHO05D000712 1.1e-26 123.2 106 68.9
Manes.10G002100 Manihot esculenta HOM05D000405 ORTHO05D000712 9.5e-15 83.6 104 54.8
Sed0020568 Sechium edule HOM05D000405 ORTHO05D000712 2.1e-14 82.4 111 49.5
QL08p065017 Quercus lobata HOM05D000405 ORTHO05D000712 1.4e-13 79.7 108 54.6
Sed0006445 Sechium edule HOM05D000405 ORTHO05D000712 1.8e-13 79.3 107 56.1
Actinidia31632 Actinidia chinensis HOM05D000405 ORTHO05D000712 5.4e-10 67.8 122 40.2
Ciclev10033384m.g Citrus clementina HOM05D000405 ORTHO05D000712 5.4e-10 67.8 112 44.6
RcHm_v2.0_Chr1g0372431 Rosa chinensis HOM05D000405 ORTHO05D000712 5.4e-10 67.8 119 42.9
Thecc.10G184200 Theobroma cacao HOM05D000405 ORTHO05D000712 7.1e-10 67.4 123 43.9
Haze_17364 Corylus avellana HOM05D000405 ORTHO05D000712 3.5e-09 65.1 121 43.8
Gohir.D04G011800 Gossypium hirsutum HOM05D000405 ORTHO05D000712 1.7e-08 62.8 125 41.6
Actinidia13642 Actinidia chinensis HOM05D000405 ORTHO05D000712 2.3e-08 62.4 93 44.1
CiPaw.01G306900 Carya illinoinensis HOM05D000405 ORTHO05D000712 2.3e-08 62.4 122 42.6
Manes.07G142500 Manihot esculenta HOM05D000405 ORTHO05D000712 3.9e-08 61.6 86 50.0
COL.COLO4_19463 Corchorus olitorius HOM05D000405 ORTHO05D000712 5.1e-08 61.2 88 48.9
Nitab4.5_0000171g0180 Nicotiana tabacum HOM05D000405 ORTHO05D000712 5.1e-08 61.2 147 37.4
Prupe.2G264900 Prunus persica HOM05D000405 ORTHO05D000712 5.1e-08 61.2 136 41.9
SGA_v2.0_scaffold60G20884 Striga asiatica HOM05D000405 ORTHO05D000712 5.1e-08 61.2 73 49.3
MD01G1168500 Malus domestica HOM05D000405 ORTHO05D000974 6.6e-08 60.8 123 42.3
Gohir.A05G404100 Gossypium hirsutum HOM05D000405 ORTHO05D000712 1.1e-07 60.1 125 41.6
TPR.G27043 Trifolium pratense HOM05D000405 ORTHO05D000712 1.5e-07 59.7 100 44.0
GSVIVG01032662001 Vitis vinifera HOM05D000405 ORTHO05D000712 1.5e-07 59.7 68 47.1
Cc02_g05280 Coffea canephora HOM05D000405 ORTHO05D000712 1.9e-07 59.3 64 56.2
Peaxi162Scf00739g00429 Petunia axillaris HOM05D000405 ORTHO05D000712 1.9e-07 59.3 126 41.3
Gorai.012G014000 Gossypium raimondii HOM05D000405 ORTHO05D000712 2.5e-07 58.9 125 40.0
Duzib106G0853 Durio zibethinus HOM05D000405 ORTHO05D000712 3.3e-07 58.5 116 41.4
Duzib114G0822 Durio zibethinus HOM05D000405 ORTHO05D000712 3.3e-07 58.5 127 44.1
Migut.F00573 Erythranthe guttata HOM05D000405 ORTHO05D000712 4.3e-07 58.2 120 39.2
Nitab4.5_0003473g0030 Nicotiana tabacum HOM05D000405 ORTHO05D000712 4.3e-07 58.2 110 42.7
Eucgr.J00107 Eucalyptus grandis HOM05D000405 ORTHO05D000712 5.6e-07 57.8 118 40.7
Cfa001202 Carpinus fangiana HOM05D000405 ORTHO05D000712 2.8e-06 55.5 129 38.8
FAN01G0759 Fragaria x ananassa HOM05D000405 ORTHO05D000712 2.8e-06 55.5 106 41.5
Ca_05518_v3 Cicer arietinum L. HOM05D000405 ORTHO05D000712 3.6e-06 55.1 112 42.9
DCAR_020153 Daucus carota HOM05D000405 ORTHO05D000712 6.2e-06 54.3 85 44.7
Medtr5g067680 Medicago truncatula HOM05D000405 ORTHO05D000712 8.1e-06 53.9 101 43.6
Solyc06g048870.3 Solanum lycopersicum HOM05D000405 ORTHO05D000712 8.1e-06 53.9 66 48.5


User provided reference genes

Program Settings