Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G006590 Cucumis sativus L. HOM05D009842 ORTHO05D011134 3.1e-93 345.1 175 100.0
MELO3C023815.2 Cucumis melo HOM05D009842 ORTHO05D011134 7.2e-82 307.4 172 90.1
ClCG02G013580 Citrullus lanatus HOM05D009842 ORTHO05D011134 2.8e-78 295.4 175 86.3
Sed0020761 Sechium edule HOM05D009842 ORTHO05D011134 1.7e-67 259.6 175 77.7
Nitab4.5_0000914g0210 Nicotiana tabacum HOM05D009842 ORTHO05D011134 6.6e-43 177.9 174 53.4
Sopen05g033310 Solanum pennellii HOM05D009842 ORTHO05D011134 6.6e-43 177.9 175 54.3
Solyc05g054840.3 Solanum lycopersicum HOM05D009842 ORTHO05D011134 5.6e-42 174.9 175 53.7
Nitab4.5_0011080g0030 Nicotiana tabacum HOM05D000454 ORTHO05D000591 8.0e-41 171.0 174 51.1
PGSC0003DMG400023509 Solanum tuberosum HOM05D009842 ORTHO05D011134 8.0e-41 171.0 176 52.3
Dinv31397 Davidia involucrata HOM05D009842 ORTHO05D011134 2.3e-40 169.5 168 57.1
PGR142G3647 Punica granatum HOM05D009842 ORTHO05D011134 8.9e-40 167.5 167 50.9
Prupe.2G225500 Prunus persica HOM05D009842 ORTHO05D011134 4.4e-39 165.2 167 53.9
TAR636G0871 Trochodendron aralioides HOM05D009842 ORTHO05D011134 5.7e-39 164.9 170 54.7
MD01G1118400 Malus domestica HOM05D009842 ORTHO05D011134 2.2e-38 162.9 167 54.5
Actinidia38217 Actinidia chinensis HOM05D009842 ORTHO05D011134 1.6e-36 156.8 170 51.8
PSO384G1346 Papaver somniferum HOM05D009842 ORTHO05D011134 1.2e-33 147.1 169 49.7
PSO339G5653 Papaver somniferum HOM05D009842 ORTHO05D011134 2.1e-33 146.4 169 47.9
Nn2g10535 Nelumbo nucifera HOM05D009842 ORTHO05D011134 1.4e-32 143.7 182 48.9
Cc02_g08540 Coffea canephora HOM05D009842 ORTHO05D011134 4.0e-32 142.1 182 45.6
TWI38G0364 Tripterygium wilfordii HOM05D009842 ORTHO05D011134 1.2e-31 140.6 147 49.0
CSS0009421 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 5.0e-27 125.2 164 46.3
CSS0024730 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 3.7e-22 109.0 183 42.6
HPP92_006590 Vanilla planifolia HOM05D009842 ORTHO05D011134 1.4e-16 90.5 166 37.3
Mapoly0003s0076 Marchantia polymorpha HOM05D013267 ORTHO05D011134 7.6e-15 84.7 218 32.6
Os05g0120800 Oryza sativa ssp. japonica HOM05D009842 ORTHO05D011134 1.1e-13 80.9 154 36.4
Peaxi162Scf00015g02512 Petunia axillaris HOM05D009842 ORTHO05D011134 4.1e-13 79.0 174 33.3
AagrBONN_evm.TU.Sc2ySwM_368.1565 Anthoceros agrestis HOM05D013267 ORTHO05D011134 1.6e-12 77.0 220 28.2
SMO165G0144 Selaginella moellendorffii HOM05D013267 ORTHO05D011134 2.7e-12 76.3 220 30.5
Zm00001eb265980 Zea mays HOM05D009842 ORTHO05D011134 4.6e-12 75.5 153 35.3
Cre16.g688450 Chlamydomonas reinhardtii HOM05D013267 ORTHO05D011134 4.0e-08 62.4 214 26.2
Actinidia02992 Actinidia chinensis HOM05D009842 ORTHO05D011134 9.9e-07 57.8 172 30.8
MCO02G316 Micromonas commoda HOM05D013267 ORTHO05D011134 9.9e-07 57.8 220 25.0


User provided reference genes

Program Settings