Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G005690 Cucumis sativus L. HOM05D005269 ORTHO05D006429 9.8e-65 250.0 126 100.0
MELO3C005384.2 Cucumis melo HOM05D005269 ORTHO05D006429 4.5e-62 241.1 126 96.8
ClCG01G005450 Citrullus lanatus HOM05D005269 ORTHO05D006429 1.2e-57 226.5 128 90.6
Sed0009591 Sechium edule HOM05D005269 ORTHO05D006429 4.0e-50 201.4 128 78.9
Sed0022400 Sechium edule HOM05D005269 ORTHO05D006429 6.4e-40 167.5 126 72.2
Cc11_g00500 Coffea canephora HOM05D005269 ORTHO05D006429 2.4e-39 165.6 127 64.6
Haze_00354 Corylus avellana HOM05D005269 ORTHO05D006429 1.6e-38 162.9 131 63.4
Cfa016104 Carpinus fangiana HOM05D005269 ORTHO05D006429 8.6e-37 157.1 139 59.7
Dinv17239 Davidia involucrata HOM05D005269 ORTHO05D006429 8.6e-37 157.1 132 60.6
Actinidia33802 Actinidia chinensis HOM05D005269 ORTHO05D006429 1.6e-35 152.9 129 62.8
Cpa.g.sc43.150 Carica papaya HOM05D005269 ORTHO05D006429 1.6e-35 152.9 128 58.6
RcHm_v2.0_Chr2g0117101 Rosa chinensis HOM05D005269 ORTHO05D006429 1.6e-35 152.9 127 58.3
CARHR009820 Cardamine hirsuta HOM05D005269 ORTHO05D006429 2.8e-35 152.1 126 60.3
Carub.0001s0919 Capsella rubella HOM05D005269 ORTHO05D006429 4.7e-35 151.4 126 61.1
AT1G09815 Arabidopsis thaliana HOM05D005269 ORTHO05D006429 8.1e-35 150.6 126 61.1
TAR374G1160 Trochodendron aralioides HOM05D005269 ORTHO05D006429 8.1e-35 150.6 124 60.5
AL1G20410 Arabidopsis lyrata HOM05D005269 ORTHO05D006429 1.1e-34 150.2 119 63.9
CiPaw.05G211300 Carya illinoinensis HOM05D005269 ORTHO05D006429 1.1e-34 150.2 126 61.1
Thhalv10009118m.g Eutrema salsugineum HOM05D005269 ORTHO05D006429 2.3e-34 149.1 129 63.6
A06p06530 Brassica napus HOM05D005269 ORTHO05D006429 3.1e-34 148.7 126 61.1
Prupe.2G330200 Prunus persica HOM05D005269 ORTHO05D006429 4.0e-34 148.3 119 62.2
BraA06t23864Z Brassica rapa HOM05D005269 ORTHO05D006429 6.8e-34 147.5 126 60.3
Nn1g09278 Nelumbo nucifera HOM05D005269 ORTHO05D006429 8.9e-34 147.1 122 61.5
THA.LOC104820303 Tarenaya hassleriana HOM05D005269 ORTHO05D006429 8.9e-34 147.1 129 61.2
BcaC05g24843 Brassica carinata HOM05D005269 ORTHO05D006429 1.2e-33 146.7 126 60.3
BolC5t29544H Brassica oleracea HOM05D005269 ORTHO05D006429 1.2e-33 146.7 126 60.3
Sp1g08440 Schrenkiella parvula HOM05D005269 ORTHO05D006429 1.2e-33 146.7 129 62.8
EL10Ac4g10063 Beta vulgaris HOM05D005269 ORTHO05D006429 1.5e-33 146.4 127 59.8
MSTRG.4345 Avicennia marina HOM05D005269 ORTHO05D006429 2.6e-33 145.6 119 60.5
FvH4_1g22780 Fragaria vesca HOM05D005269 ORTHO05D006429 2.6e-33 145.6 124 58.1
MD07G1311000 Malus domestica HOM05D005269 ORTHO05D006429 2.6e-33 145.6 124 61.3
Eucgr.I00374 Eucalyptus grandis HOM05D005269 ORTHO05D006429 4.4e-33 144.8 126 56.3
FAN26G3478 Fragaria x ananassa HOM05D005269 ORTHO05D006429 5.8e-33 144.4 124 58.1
Solyc09g091450.3 Solanum lycopersicum HOM05D005269 ORTHO05D006429 5.8e-33 144.4 124 55.6
Aa31LG1G5120 Aethionema arabicum HOM05D005269 ORTHO05D006429 7.6e-33 144.1 126 57.9
Ciclev10033086m.g Citrus clementina HOM05D005269 ORTHO05D006429 7.6e-33 144.1 125 58.4
Peaxi162Scf00047g01229 Petunia axillaris HOM05D005269 ORTHO05D006429 1.3e-32 143.3 126 56.3
PGSC0003DMG400029616 Solanum tuberosum HOM05D005269 ORTHO05D006429 1.3e-32 143.3 124 55.6
Oeu034712.1 Olea europaea HOM05D005269 ORTHO05D006429 1.7e-32 142.9 130 57.7
Sopen09g034380 Solanum pennellii HOM05D005269 ORTHO05D006429 1.7e-32 142.9 124 54.8
CAN.G500.91 Capsicum annuum HOM05D005269 ORTHO05D006429 2.9e-32 142.1 125 56.0
FAN19G2412 Fragaria x ananassa HOM05D005269 ORTHO05D006429 3.7e-32 141.7 124 57.3
FAN23G2200 Fragaria x ananassa HOM05D005269 ORTHO05D006429 3.7e-32 141.7 119 59.7
Ah.04g159550 Amaranthus hybridus HOM05D005269 ORTHO05D006429 4.9e-32 141.4 126 58.7
Manes.09G130300 Manihot esculenta HOM05D005269 ORTHO05D006429 6.4e-32 141.0 128 55.5
PGR004G2648 Punica granatum HOM05D005269 ORTHO05D006429 6.4e-32 141.0 126 58.7
Thecc.05G226600 Theobroma cacao HOM05D005269 ORTHO05D006429 8.4e-32 140.6 130 60.8
FAN28G1075 Fragaria x ananassa HOM05D005269 ORTHO05D006429 1.1e-31 140.2 124 57.3
Hma1.2p1_0419F.1_g149570 Hydrangea macrophylla HOM05D005269 ORTHO05D006429 4.1e-31 138.3 131 55.7
Potri.019G042900 Populus trichocarpa HOM05D005269 ORTHO05D006429 4.1e-31 138.3 126 57.1
TWI32G0228 Tripterygium wilfordii HOM05D005269 ORTHO05D006429 4.1e-31 138.3 142 53.5
Psat7g094200 Pisum sativum HOM05D005269 ORTHO05D006429 5.4e-31 137.9 127 55.9
Sabra19G0053500 Salix brachista HOM05D005269 ORTHO05D006429 7.1e-31 137.5 127 57.5
DCAR_009029 Daucus carota HOM05D005269 ORTHO05D006429 1.2e-30 136.7 126 57.1
Duzib128G1401 Durio zibethinus HOM05D005269 ORTHO05D006429 1.6e-30 136.3 130 58.5
Lj7A504G56 Lonicera japonica HOM05D005269 ORTHO05D006429 2.1e-30 136.0 124 54.0
Gorai.007G246800 Gossypium raimondii HOM05D005269 ORTHO05D006429 2.7e-30 135.6 127 57.5
COL.COLO4_12968 Corchorus olitorius HOM05D005269 ORTHO05D006429 4.6e-30 134.8 130 56.9
arahy.Tifrunner.gnm1.ann1.UWAC6K Arachis hypogaea HOM05D005269 ORTHO05D006429 6.0e-30 134.4 127 59.1
Eucgr.L00611 Eucalyptus grandis HOM05D005269 ORTHO05D006429 6.0e-30 134.4 126 54.0
Gohir.D11G234500 Gossypium hirsutum HOM05D005269 ORTHO05D006429 6.0e-30 134.4 127 56.7
Thecc.05G226400 Theobroma cacao HOM05D005269 ORTHO05D006429 6.0e-30 134.4 129 58.1
Gohir.A11G225900 Gossypium hirsutum HOM05D005269 ORTHO05D006429 1.0e-29 133.7 127 55.9
Rhsim09G0214100 Rhododendron simsii HOM05D005269 ORTHO05D006429 1.3e-29 133.3 145 53.8
Sc16g0010860 Simmondsia chinensis HOM05D005269 ORTHO05D006429 1.7e-29 132.9 126 54.0
Gohir.A13G001000 Gossypium hirsutum HOM05D005269 ORTHO05D006429 2.3e-29 132.5 127 55.9
Potri.013G076400 Populus trichocarpa HOM05D005269 ORTHO05D006429 2.3e-29 132.5 128 57.8
ATR0568G075 Amborella trichopoda HOM05D005269 ORTHO05D006429 3.9e-29 131.7 129 52.7
Psat7g094160 Pisum sativum HOM05D005269 ORTHO05D006429 3.9e-29 131.7 122 56.6
Thecc.05G226200 Theobroma cacao HOM05D005269 ORTHO05D006429 8.6e-29 130.6 130 57.7
unitig_52.g17685 Utricularia gibba HOM05D005269 ORTHO05D006429 8.6e-29 130.6 119 52.9
Atru.chr12.1824 Acer truncatum HOM05D005269 ORTHO05D006429 1.1e-28 130.2 127 55.9
arahy.Tifrunner.gnm1.ann1.FKKB7G Arachis hypogaea HOM05D005269 ORTHO05D006429 1.1e-28 130.2 127 56.7
Glyma.05G124300 Glycine max HOM05D005269 ORTHO05D006429 1.1e-28 130.2 127 55.9
PSO063G4725 Papaver somniferum HOM05D005269 ORTHO05D006429 1.1e-28 130.2 123 53.7
GSVIVG01024265001 Vitis vinifera HOM05D005269 ORTHO05D006429 1.1e-28 130.2 120 56.7
MBI04_g30790_MAGBIO Magnolia biondii HOM05D005269 ORTHO05D006429 1.9e-28 129.4 121 59.5
AUR62000236 Chenopodium quinoa HOM05D005269 ORTHO05D006429 2.5e-28 129.0 129 55.0
TAR629G0465 Trochodendron aralioides HOM05D005269 ORTHO05D006429 4.3e-28 128.3 123 55.3
Aqoxy6G02173 Aquilegia oxysepala HOM05D005269 ORTHO05D006429 5.6e-28 127.9 89 66.3
PSO782G4777 Papaver somniferum HOM05D005269 ORTHO05D006429 5.6e-28 127.9 124 52.4
SGA_v2.0_scaffold18G08210 Striga asiatica HOM05D005269 ORTHO05D006429 1.2e-27 126.7 119 52.9
Phvul.002G201100 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 2.8e-27 125.6 127 55.9
Sabra13G0065600 Salix brachista HOM05D005269 ORTHO05D006429 1.1e-26 123.6 126 54.0
Peaxi162Scf00536g00089 Petunia axillaris HOM05D005269 ORTHO05D006429 1.4e-26 123.2 121 54.5
AUR62006583 Chenopodium quinoa HOM05D005269 ORTHO05D006429 2.4e-26 122.5 129 54.3
Ah.06g194960 Amaranthus hybridus HOM05D005269 ORTHO05D006429 3.1e-26 122.1 126 50.8
Ca_18303_v3 Cicer arietinum L. HOM05D005269 ORTHO05D006429 5.2e-26 121.3 117 53.0
Phvul.002G201200 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 5.2e-26 121.3 127 52.8
HanXRQChr17g0540921 Helianthus annuus HOM05D005269 ORTHO05D006429 6.8e-26 120.9 129 54.3
Zm00001eb318480 Zea mays HOM05D005269 ORTHO05D006429 1.5e-25 119.8 131 48.1
CSS0034044 Camellia sinensis var. sinensis HOM05D005269 ORTHO05D006429 2.6e-25 119.0 128 53.9
vmacro22190 Vaccinium macrocarpon HOM05D005269 ORTHO05D006429 3.4e-25 118.6 129 53.5
Migut.H00004 Erythranthe guttata HOM05D005269 ORTHO05D006429 9.9e-25 117.1 128 51.6
PGSC0003DMG400019109 Solanum tuberosum HOM05D005269 ORTHO05D006429 1.3e-24 116.7 133 48.1
Nitab4.5_0001066g0040 Nicotiana tabacum HOM05D005269 ORTHO05D006429 1.7e-24 116.3 130 47.7
Hund07408 Selenicereus undatus HOM05D005269 ORTHO05D006429 1.7e-24 116.3 127 50.4
Nitab4.5_0001769g0050 Nicotiana tabacum HOM05D005269 ORTHO05D006429 4.9e-24 114.8 123 48.0
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 6.4e-24 114.4 121 51.2
VMungo0251G2623 Vigna mungo HOM05D005269 ORTHO05D006429 8.4e-24 114.0 126 52.4
CDE11G1263 Ceratophyllum demersum HOM05D005269 ORTHO05D006429 1.1e-23 113.6 126 46.8
CANSAT78G2182 Cannabis sativa HOM05D005269 ORTHO05D006429 1.9e-23 112.8 120 51.7
Medtr4g094465 Medicago truncatula HOM05D005269 ORTHO05D006429 4.2e-23 111.7 125 48.0
Solyc05g053520.3 Solanum lycopersicum HOM05D005269 ORTHO05D006429 5.4e-23 111.3 131 48.9
Sopen05g032040 Solanum pennellii HOM05D005269 ORTHO05D006429 5.4e-23 111.3 131 48.1
Lsat_1_v5_gn_9_46181 Lactuca sativa HOM05D005269 ORTHO05D006429 7.1e-23 110.9 131 51.9
CAN.G17.24 Capsicum annuum HOM05D005269 ORTHO05D006429 7.8e-22 107.5 126 47.6
CDE02G3654 Ceratophyllum demersum HOM05D005269 ORTHO05D006429 7.8e-22 107.5 126 45.2
Mapoly0002s0066 Marchantia polymorpha HOM05D005269 ORTHO05D006429 2.3e-21 105.9 130 45.4
Gorai.013G185000 Gossypium raimondii HOM05D005269 ORTHO05D006429 1.1e-20 103.6 131 46.6
SEGI_20967 Sequoiadendron giganteum HOM05D005269 ORTHO05D006429 1.9e-20 102.8 137 43.1
TPR.G23807 Trifolium pratense HOM05D005269 ORTHO05D006429 1.6e-19 99.8 78 56.4
HPP92_001933 Vanilla planifolia HOM05D005269 ORTHO05D006429 1.6e-19 99.8 94 52.1
Gohir.D13G162800 Gossypium hirsutum HOM05D005269 ORTHO05D006429 4.8e-19 98.2 128 47.7
Os09g0520100 Oryza sativa ssp. japonica HOM05D005269 ORTHO05D006429 1.1e-18 97.1 131 42.7
Lj4g0020860 Lotus japonicus HOM05D005269 ORTHO05D006429 3.1e-18 95.5 111 48.6
C05p07920 Brassica napus HOM05D005269 ORTHO05D006429 4.0e-18 95.1 65 64.6
Glyma.08G079500 Glycine max HOM05D005269 ORTHO05D006429 9.0e-18 94.0 115 44.3
Gohir.A13G157700 Gossypium hirsutum HOM05D005269 ORTHO05D006429 2.0e-17 92.8 123 44.7
Pp3c4_21450 Physcomitrium patens HOM05D005269 ORTHO05D006429 2.0e-17 92.8 126 45.2
Lalb_Chr07g0189121 Lupinus albus HOM05D005269 ORTHO05D006429 2.4e-15 85.9 126 39.7
TPR.G31897 Trifolium pratense HOM05D005269 ORTHO05D006429 3.2e-15 85.5 119 41.2
Glyma.15G135000 Glycine max HOM05D005269 ORTHO05D006429 4.2e-15 85.1 115 41.7
Phvul.006G123900 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 5.4e-15 84.7 65 52.3
Actinidia04559 Actinidia chinensis HOM05D005269 ORTHO05D006429 2.1e-14 82.8 97 53.6
Medtr1g105865 Medicago truncatula HOM05D005269 ORTHO05D006429 1.0e-13 80.5 118 39.8
AagrBONN_evm.TU.Sc2ySwM_344.2125 Anthoceros agrestis HOM05D005269 ORTHO05D006429 2.8e-11 72.4 127 33.1
Medtr4g094458 Medicago truncatula HOM05D005269 ORTHO05D006429 1.4e-10 70.1 111 42.3
PRCOL_00003345 Prasinoderma coloniale HOM05D005269 ORTHO05D006429 1.8e-10 69.7 127 34.6
SMO134G0019 Selaginella moellendorffii HOM05D001491 ORTHO05D001443 1.8e-10 69.7 110 39.1
AUR62032913 Chenopodium quinoa HOM05D005269 ORTHO05D006429 2.4e-10 69.3 55 54.5
SEGI_01057 Sequoiadendron giganteum HOM05D005269 ORTHO05D006429 4.0e-10 68.6 82 35.4
Medtr5g006580 Medicago truncatula HOM05D004187 ORTHO05D004890 1.5e-09 66.6 49 57.1
SEGI_08095 Sequoiadendron giganteum HOM05D005269 ORTHO05D006429 1.5e-09 66.6 132 31.8
Zm00001eb415390 Zea mays HOM05D005269 ORTHO05D006429 3.4e-09 65.5 81 44.4
CDE02G2358 Ceratophyllum demersum HOM05D005269 ORTHO05D006429 5.8e-09 64.7 46 60.9
Mapoly0080s0095 Marchantia polymorpha HOM05D005269 ORTHO05D006429 1.3e-08 63.5 61 45.9
MCO11G533 Micromonas commoda HOM05D005269 ORTHO05D006429 1.3e-08 63.5 60 51.7
Os08g0163300 Oryza sativa ssp. japonica HOM05D005269 ORTHO05D006429 1.7e-08 63.2 59 47.5
Cre06.g292950 Chlamydomonas reinhardtii HOM05D005269 ORTHO05D006429 2.4e-07 59.3 124 30.6
Nitab4.5_0002284g0060 Nicotiana tabacum HOM05D005269 ORTHO05D006429 1.2e-06 57.0 62 53.2
Nitab4.5_0011997g0010 Nicotiana tabacum HOM05D005269 ORTHO05D006429 1.2e-06 57.0 62 53.2
Phvul.006G123800 Phaseolus vulgaris HOM05D005269 ORTHO05D006429 6.0e-06 54.7 88 40.9


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