Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.8e-215 752.3 373 100.0
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 2.3e-207 725.3 373 95.7
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 8.4e-189 663.7 379 86.8
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 1.2e-182 643.3 372 83.6
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.9e-180 636.0 362 84.0
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 9.3e-180 633.6 372 80.6
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 9.3e-180 633.6 363 82.6
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 1.2e-179 633.3 371 82.2
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 2.1e-179 632.5 368 82.6
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 2.1e-179 632.5 371 80.6
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 2.7e-179 632.1 362 82.3
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 4.6e-179 631.3 363 82.9
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 1.3e-178 629.8 362 83.1
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 1.3e-178 629.8 369 82.4
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 3.0e-178 628.6 372 80.6
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 3.0e-178 628.6 372 80.6
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 3.9e-178 628.2 362 83.1
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 5.1e-178 627.9 367 82.0
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 8.7e-178 627.1 367 82.3
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 1.5e-177 626.3 373 80.7
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 2.5e-177 625.5 369 81.3
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 2.5e-177 625.5 366 80.6
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 5.6e-177 624.4 367 80.9
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 7.4e-177 624.0 367 80.9
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 7.4e-177 624.0 362 82.6
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.6e-176 622.9 369 81.0
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.1e-176 622.5 373 80.7
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 4.8e-176 621.3 364 80.2
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 8.2e-176 620.5 362 80.7
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.4e-175 619.8 363 81.3
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 2.4e-175 619.0 362 81.5
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 3.1e-175 618.6 363 81.3
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 5.3e-175 617.8 363 80.4
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 5.3e-175 617.8 367 80.1
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 5.3e-175 617.8 367 80.4
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 6.9e-175 617.5 364 81.3
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 2.6e-174 615.5 362 81.2
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 4.5e-174 614.8 362 81.8
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 5.8e-174 614.4 373 79.4
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 7.6e-174 614.0 362 80.4
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 2.2e-173 612.5 369 79.4
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 3.8e-173 611.7 361 80.6
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 4.9e-173 611.3 367 79.6
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 8.4e-173 610.5 365 80.0
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 8.4e-173 610.5 368 79.1
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 1.1e-172 610.1 363 79.1
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 1.1e-172 610.1 361 80.6
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 7.1e-172 607.4 363 77.1
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 2.7e-171 605.5 361 78.9
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 7.9e-171 604.0 403 73.7
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 1.8e-170 602.8 360 79.2
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 5.1e-170 601.3 363 79.1
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 4.3e-169 598.2 361 78.1
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 9.6e-169 597.0 360 76.9
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 3.7e-168 595.1 361 77.8
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 4.8e-168 594.7 363 77.4
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 6.3e-168 594.3 361 77.6
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 1.4e-167 593.2 361 76.2
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 4.5e-166 588.2 370 76.2
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 5.9e-166 587.8 352 78.4
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 1.3e-165 586.6 360 77.8
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 1.3e-165 586.6 361 76.7
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 3.8e-165 585.1 362 77.3
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 8.5e-165 583.9 360 76.9
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 8.5e-165 583.9 362 76.8
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 2.7e-163 578.9 360 76.9
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 4.6e-163 578.2 368 75.3
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 6.1e-163 577.8 389 72.8
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 5.1e-162 574.7 364 75.0
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 5.1e-162 574.7 371 74.7
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.5e-161 573.2 363 75.8
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 1.5e-161 573.2 389 72.0
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 1.9e-161 572.8 368 74.5
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 2.5e-161 572.4 375 74.1
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 4.3e-161 571.6 360 76.1
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 2.2e-160 569.3 370 73.5
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 4.8e-160 568.2 367 73.8
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 4.8e-160 568.2 372 73.1
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 8.2e-160 567.4 370 73.5
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 3.8e-157 558.5 366 74.0
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 6.5e-157 557.8 362 74.3
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.8e-151 539.7 361 71.7
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.2e-150 537.0 352 73.6
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 3.4e-150 535.4 361 71.7
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 2.5e-148 529.3 300 84.3
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 9.1e-143 510.8 303 81.2
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 1.3e-141 506.9 276 87.7
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 2.9e-141 505.8 365 66.0
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 3.8e-141 505.4 284 85.2
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 6.1e-139 498.0 284 83.5
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 1.2e-137 493.8 363 66.4
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 1.2e-137 493.8 267 87.3
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 1.4e-135 486.9 372 64.8
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 2.7e-131 472.6 376 62.8
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 4.2e-124 448.7 306 72.2
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 7.5e-113 411.4 241 81.7
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 1.8e-111 406.8 231 81.4
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 6.6e-109 398.3 227 82.8
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.8e-107 392.9 401 53.4
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.1e-106 391.0 224 79.9
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 6.9e-82 308.5 179 81.6
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 2.1e-67 260.4 212 63.2
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 1.4e-50 204.5 132 73.5
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 3.1e-50 203.4 122 77.9
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 5.0e-48 196.1 123 73.2
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.9e-45 186.4 123 69.9
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 8.8e-45 185.3 122 69.7
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 8.8e-45 185.3 122 69.7
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 1.1e-44 184.9 121 71.9
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.1e-42 176.8 123 67.5
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.5e-31 140.6 95 72.6
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 2.3e-29 134.0 114 56.1
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 7.5e-20 102.4 57 78.9
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 2.6e-12 77.4 54 68.5
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 5.7e-12 76.3 54 68.5
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 9.8e-12 75.5 54 66.7
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 3.1e-10 70.5 54 64.8
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 1.6e-09 68.2 43 69.8
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 7.7e-09 65.9 257 24.5
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 5.5e-07 59.7 34 79.4
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 7.2e-07 59.3 205 25.9


User provided reference genes

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