Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G001550 Cucumis sativus L. HOM05D008304 ORTHO05D004056 4.9e-52 207.6 112 100.0
ClCG01G001410 Citrullus lanatus HOM05D008304 ORTHO05D004056 6.1e-26 120.9 79 89.9
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 1.0e-17 93.6 79 68.4
QL02p027330 Quercus lobata HOM05D008304 ORTHO05D004056 3.8e-12 75.1 79 54.4
Manes.01G055200 Manihot esculenta HOM05D008304 ORTHO05D004056 5.0e-12 74.7 79 55.7
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 3.2e-11 72.0 82 57.3
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 4.2e-11 71.6 82 57.3
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 2.1e-10 69.3 79 54.4
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 2.7e-10 68.9 80 57.5
CSS0003921 Camellia sinensis var. sinensis HOM05D008304 ORTHO05D004056 3.6e-10 68.6 85 54.1
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 4.7e-10 68.2 79 57.0
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 1.4e-09 66.6 84 53.6
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 2.3e-09 65.9 84 52.4
COL.COLO4_10829 Corchorus olitorius HOM05D008304 ORTHO05D004056 3.0e-09 65.5 83 55.4
Oeu042857.1 Olea europaea HOM05D008304 ORTHO05D004056 4.0e-09 65.1 79 54.4
Nitab4.5_0002520g0050 Nicotiana tabacum HOM05D008304 ORTHO05D004056 6.8e-09 64.3 84 50.0
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 8.8e-09 63.9 86 50.0
Sed0024309 Sechium edule HOM05D008304 ORTHO05D004056 8.8e-09 63.9 81 63.0
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 1.2e-08 63.5 79 54.4
GSVIVG01019681001 Vitis vinifera HOM05D008304 ORTHO05D004056 2.0e-08 62.8 81 50.6
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 7.5e-08 60.8 79 50.6
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 1.3e-07 60.1 79 48.1
Migut.E00724 Erythranthe guttata HOM05D008304 ORTHO05D004056 1.7e-07 59.7 79 49.4
Oeu015753.1 Olea europaea HOM05D008304 ORTHO05D004056 2.2e-07 59.3 80 55.0
vmacro11488 Vaccinium macrocarpon HOM05D008304 ORTHO05D004056 2.2e-07 59.3 82 50.0
Potri.001G449633 Populus trichocarpa HOM05D008304 ORTHO05D004056 3.7e-07 58.5 79 50.6
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 4.8e-07 58.2 79 51.9
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 4.8e-07 58.2 79 51.9
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 4.8e-07 58.2 79 51.9
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 4.8e-07 58.2 79 51.9
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 4.8e-07 58.2 81 50.6
Dinv18759 Davidia involucrata HOM05D008304 ORTHO05D004056 6.3e-07 57.8 97 45.4
Cc08_g16980 Coffea canephora HOM05D008304 ORTHO05D004056 1.1e-06 57.0 88 48.9
MBI04_g22063_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 1.1e-06 57.0 79 50.6
MBI12_g20132_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 1.8e-06 56.2 81 49.4
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 1.8e-06 56.2 79 45.6
Sabra16G0303400 Salix brachista HOM05D008304 ORTHO05D004056 1.8e-06 56.2 79 49.4
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 2.4e-06 55.8 79 46.8
PGR042G2542 Punica granatum HOM05D008304 ORTHO05D004056 7.0e-06 54.3 79 57.0


User provided reference genes

Program Settings