Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 1.3e-163 579.7 298 100.0
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 4.4e-148 528.1 296 91.6
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 5.6e-135 484.6 296 83.8
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.2e-108 397.1 312 67.0
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.8e-107 392.1 295 67.5
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 4.9e-107 391.7 296 66.6
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.2e-106 389.0 295 67.8
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 1.2e-105 387.1 296 66.2
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.1e-105 386.3 297 66.7
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 3.5e-105 385.6 295 66.1
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.0e-104 384.0 304 66.1
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.1e-103 380.6 304 65.5
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.1e-103 380.6 305 66.2
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 1.9e-103 379.8 306 64.4
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 5.6e-103 378.3 304 65.1
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.6e-103 378.3 304 65.1
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.3e-102 377.1 301 65.4
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.3e-102 377.1 300 66.3
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.8e-102 375.9 299 65.6
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 3.6e-102 375.6 296 65.2
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 4.8e-102 375.2 309 63.8
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 4.8e-102 375.2 312 65.1
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 6.2e-102 374.8 301 65.1
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 8.1e-102 374.4 308 64.0
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 1.8e-101 373.2 297 64.0
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 2.9e-99 365.9 306 61.8
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 2.9e-99 365.9 296 63.9
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 3.8e-99 365.5 296 62.8
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 6.4e-99 364.8 296 62.5
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 8.4e-99 364.4 296 62.5
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.4e-98 362.8 298 64.4
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 3.2e-98 362.5 253 70.8
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 4.2e-98 362.1 296 61.5
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 5.5e-98 361.7 296 62.8
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 5.5e-98 361.7 296 63.2
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 1.2e-97 360.5 296 61.8
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 1.2e-97 360.5 295 63.1
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 7.9e-97 357.8 337 58.2
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 1.0e-96 357.5 298 62.4
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.3e-96 357.1 297 61.3
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.9e-96 355.5 296 62.2
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 5.1e-96 355.1 298 60.7
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 5.1e-96 355.1 298 60.7
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.1e-96 355.1 293 62.8
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 1.1e-95 354.0 308 61.0
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 1.1e-95 354.0 316 60.4
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.1e-95 354.0 296 62.5
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 1.5e-95 353.6 311 62.4
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.5e-95 353.6 296 61.1
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.5e-95 353.6 296 63.9
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 3.3e-95 352.4 302 61.3
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 6.2e-94 348.2 296 61.5
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 8.1e-94 347.8 316 58.5
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 8.1e-94 347.8 316 58.5
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 8.1e-94 347.8 316 59.5
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.4e-93 347.1 316 58.5
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.4e-93 347.1 316 58.5
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.8e-93 346.7 316 58.5
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 4.0e-93 345.5 315 59.0
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 9.0e-93 344.4 297 60.3
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.5e-92 343.6 316 58.5
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 2.0e-92 343.2 298 60.7
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 3.4e-92 342.4 302 59.3
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 5.8e-92 341.7 318 58.8
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 1.0e-91 340.9 299 60.5
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.3e-91 340.5 299 60.9
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 1.7e-91 340.1 316 58.5
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.1e-90 337.4 298 61.1
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 5.5e-90 335.1 308 58.8
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 7.1e-90 334.7 299 60.2
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 2.1e-89 333.2 316 57.6
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 3.5e-89 332.4 298 57.7
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 6.7e-88 328.2 312 56.1
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 6.7e-88 328.2 304 59.2
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 8.7e-88 327.8 305 58.4
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.1e-87 327.4 302 58.6
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 4.8e-86 322.0 315 56.8
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 3.1e-85 319.3 296 58.1
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 3.1e-85 319.3 309 57.0
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 2.6e-84 316.2 301 57.1
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 4.5e-84 315.5 304 56.9
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 4.5e-84 315.5 298 55.4
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 3.6e-81 305.8 310 54.5
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.5e-79 300.4 266 59.4
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 3.3e-79 299.3 298 56.4
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 9.7e-79 297.7 285 55.8
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.1e-77 292.4 279 56.6
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 5.3e-77 292.0 265 55.1
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 7.7e-76 288.1 294 53.7
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.3e-75 287.3 301 54.8
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 1.3e-75 287.3 258 57.4
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.7e-75 287.0 298 53.4
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 3.2e-74 282.7 297 55.2
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.1e-73 280.0 206 68.9
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.7e-73 279.6 305 52.5
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 2.3e-72 276.6 312 50.3
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 1.7e-70 270.4 283 52.7
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 5.3e-69 265.4 308 49.4
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 6.1e-65 251.9 296 49.0
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 8.8e-64 248.1 204 62.3
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.5e-58 230.7 243 53.1
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 1.2e-57 227.6 234 50.9
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 5.7e-55 218.8 305 44.6
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 8.8e-48 194.9 286 43.0
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 1.2e-47 194.5 187 55.6
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.2e-47 194.5 279 44.8
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.8e-46 189.9 306 42.2
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 8.3e-46 188.3 207 50.2
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.8e-45 187.2 305 41.3
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 5.0e-43 179.1 264 42.4
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 9.5e-42 174.9 307 40.7
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 9.8e-39 164.9 133 63.9
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 2.8e-38 163.3 299 39.1
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 4.9e-38 162.5 131 64.9
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 3.1e-37 159.8 298 37.6
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 2.3e-35 153.7 178 50.0
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.3e-34 149.4 304 36.2
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 2.1e-33 147.1 127 61.4
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.4e-31 139.8 225 40.9
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 5.7e-31 139.0 120 60.8
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.9e-30 136.7 178 44.9
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 2.5e-26 123.6 120 55.8
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 4.3e-26 122.9 141 49.6
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.4e-24 117.9 92 62.0
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.4e-24 117.9 150 44.0
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 4.4e-23 112.8 131 48.9
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 7.5e-23 112.1 158 44.9
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 1.2e-20 104.8 100 56.0
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 4.6e-20 102.8 125 48.0
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 6.2e-17 92.4 116 43.1
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.9e-14 83.6 102 52.0
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 3.0e-11 73.6 64 60.9


User provided reference genes

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