Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 6.3e-32 140.2 73 100.0
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 9.1e-31 136.3 73 95.9
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 7.2e-28 126.7 73 89.0
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 2.2e-24 115.2 73 80.8
Sed0001965 Sechium edule HOM05D006482 ORTHO05D008149 3.5e-22 107.8 69 79.7
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 1.4e-18 95.9 73 65.8
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 1.8e-18 95.5 73 67.1
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 2.3e-18 95.1 73 67.1
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 2.3e-18 95.1 73 67.1
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 4.0e-18 94.4 73 64.4
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 4.0e-18 94.4 72 66.7
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 6.8e-18 93.6 73 64.4
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 1.2e-17 92.8 73 64.4
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 1.5e-17 92.4 73 61.6
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 1.5e-17 92.4 73 61.6
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 1.5e-17 92.4 73 61.6
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 1.5e-17 92.4 73 63.0
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 1.5e-17 92.4 73 63.0
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 2.0e-17 92.0 73 63.0
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 2.0e-17 92.0 73 64.4
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 2.6e-17 91.7 73 63.0
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 4.4e-17 90.9 73 61.6
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 4.4e-17 90.9 73 61.6
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 4.4e-17 90.9 73 63.0
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 4.4e-17 90.9 73 64.4
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 5.7e-17 90.5 73 61.6
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 5.7e-17 90.5 73 63.0
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 5.7e-17 90.5 73 63.0
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 5.7e-17 90.5 73 61.6
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 5.7e-17 90.5 73 64.4
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 7.5e-17 90.1 73 64.4
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 9.8e-17 89.7 73 63.0
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 9.8e-17 89.7 73 61.6
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 1.3e-16 89.4 73 58.9
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 1.7e-16 89.0 73 60.3
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 1.7e-16 89.0 73 61.6
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 1.7e-16 89.0 73 60.3
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 2.2e-16 88.6 73 63.0
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 2.8e-16 88.2 73 60.3
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 2.8e-16 88.2 73 58.9
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 3.7e-16 87.8 73 61.6
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 3.7e-16 87.8 73 58.9
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 4.9e-16 87.4 73 60.3
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 4.9e-16 87.4 73 58.9
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 4.9e-16 87.4 73 60.3
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 8.3e-16 86.7 73 60.3
Sc13g0010170 Simmondsia chinensis HOM05D006482 ORTHO05D008149 8.3e-16 86.7 73 58.9
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 1.1e-15 86.3 73 60.3
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 1.1e-15 86.3 74 63.5
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 1.1e-15 86.3 72 58.3
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 1.1e-15 86.3 73 56.2
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 2.4e-15 85.1 66 63.6
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 2.4e-15 85.1 66 65.2
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 2.4e-15 85.1 66 65.2
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 2.4e-15 85.1 65 63.1
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 2.4e-15 85.1 69 65.2
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 3.2e-15 84.7 66 63.6
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 4.1e-15 84.3 66 63.6
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 4.1e-15 84.3 68 60.3
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 5.4e-15 84.0 69 59.4
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 7.0e-15 83.6 74 60.8
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 7.0e-15 83.6 73 58.9
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 7.0e-15 83.6 70 57.1
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 7.0e-15 83.6 68 61.8
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 9.2e-15 83.2 66 63.6
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 9.2e-15 83.2 66 62.1
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 9.2e-15 83.2 73 60.3
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 1.2e-14 82.8 73 54.8
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 1.6e-14 82.4 66 60.6
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 1.6e-14 82.4 66 60.6
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 1.6e-14 82.4 66 60.6
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 2.0e-14 82.0 70 62.9
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 2.7e-14 81.6 72 55.6
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 2.7e-14 81.6 65 61.5
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 3.5e-14 81.3 73 56.2
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 3.5e-14 81.3 73 56.2
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 5.9e-14 80.5 66 62.1
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 5.9e-14 80.5 66 62.1
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 5.9e-14 80.5 73 57.5
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 7.8e-14 80.1 73 56.2
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 1.0e-13 79.7 73 56.2
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 1.3e-13 79.3 65 61.5
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 1.7e-13 79.0 73 54.8
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 1.7e-13 79.0 74 55.4
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 1.7e-13 79.0 73 54.8
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 2.3e-13 78.6 73 54.8
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 2.3e-13 78.6 69 56.5
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 2.9e-13 78.2 73 54.8
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 3.9e-13 77.8 73 57.5
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 5.0e-13 77.4 66 59.1
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 5.0e-13 77.4 73 54.8
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 6.6e-13 77.0 73 56.2
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 6.6e-13 77.0 64 60.9
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 6.6e-13 77.0 73 54.8
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 6.6e-13 77.0 73 56.2
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 8.6e-13 76.6 96 50.0
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 8.6e-13 76.6 71 59.2
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 8.6e-13 76.6 88 48.9
Glyma.06G134500 Glycine max HOM05D006482 ORTHO05D008149 8.6e-13 76.6 73 56.2
unitig_699.g19497 Utricularia gibba HOM05D006482 ORTHO05D008149 8.6e-13 76.6 70 54.3
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 1.5e-12 75.9 73 56.2
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 2.5e-12 75.1 73 52.1
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 2.5e-12 75.1 99 48.5
Gohir.D12G247600 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.8e-10 68.9 73 54.8
SEGI_31465 Sequoiadendron giganteum HOM05D006482 ORTHO05D008149 3.1e-10 68.2 73 53.4
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 5.2e-10 67.4 61 55.7
AUR62006020 Chenopodium quinoa HOM05D006482 ORTHO05D008149 1.2e-09 66.2 43 74.4
FAN17G0467 Fragaria x ananassa HOM05D006482 ORTHO05D008149 1.2e-09 66.2 54 63.0
QL09p007382 Quercus lobata HOM05D006482 ORTHO05D008149 4.4e-09 64.3 142 34.5
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 5.8e-09 63.9 73 52.1
Os05g0535700 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 7.5e-09 63.5 58 51.7
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 1.3e-08 62.8 42 71.4
CDE11G0870 Ceratophyllum demersum HOM05D006482 ORTHO05D008149 1.7e-08 62.4 95 42.1
Eucgr.E02459 Eucalyptus grandis HOM05D006482 ORTHO05D008149 1.7e-08 62.4 55 54.5
Haze_00279 Corylus avellana HOM05D006482 ORTHO05D008149 2.2e-08 62.0 43 67.4
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 2.2e-08 62.0 42 73.8
DCAR_006554 Daucus carota HOM05D006482 ORTHO05D008149 2.9e-08 61.6 41 75.6
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 8.3e-08 60.1 41 68.3
Sabra12G0010900 Salix brachista HOM05D006482 ORTHO05D008149 1.1e-07 59.7 41 68.3
ATR0579G147 Amborella trichopoda HOM05D006482 ORTHO05D008149 2.4e-07 58.5 42 64.3
CSS0018303 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 2.4e-07 58.5 41 65.9
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 2.4e-07 58.5 58 48.3
FvH4_4g29090 Fragaria vesca HOM05D000768 ORTHO05D046510 9.2e-07 56.6 48 60.4
Zm00001eb294050 Zea mays HOM05D006482 ORTHO05D008149 1.6e-06 55.8 58 50.0


User provided reference genes

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