Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 3.8e-279 964.1 466 100.0
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 8.7e-268 926.4 495 91.5
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 1.2e-261 906.0 466 92.9
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 2.9e-231 805.1 466 83.3
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 2.8e-189 665.6 458 68.1
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 6.8e-188 661.0 427 71.9
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 2.0e-187 659.4 466 67.6
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.4e-185 653.3 453 68.4
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 1.4e-185 653.3 458 67.7
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.4e-185 653.3 460 67.4
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 3.2e-185 652.1 425 72.2
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 7.0e-185 651.0 425 71.3
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 7.0e-185 651.0 468 64.5
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 2.7e-184 649.0 462 66.7
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 3.5e-184 648.7 464 66.2
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 4.6e-184 648.3 425 71.1
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 7.8e-184 647.5 425 70.8
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 1.3e-183 646.7 445 69.4
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 3.0e-183 645.6 461 66.6
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 6.6e-183 644.4 425 71.1
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 1.9e-182 642.9 429 69.0
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.9e-182 642.9 465 66.0
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 2.5e-182 642.5 439 68.8
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.7e-181 638.3 460 65.4
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.1e-180 637.1 463 64.4
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.5e-179 633.3 425 69.6
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 3.4e-179 632.1 457 65.9
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 3.4e-179 632.1 464 64.9
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 1.3e-178 630.2 433 67.7
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.4e-177 626.7 425 69.2
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.6e-176 623.2 432 66.4
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 2.7e-176 622.5 465 63.7
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.5e-176 622.1 444 66.7
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 7.8e-176 620.9 461 64.9
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 1.0e-175 620.5 440 65.9
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 8.6e-175 617.5 408 69.6
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 8.6e-175 617.5 461 64.2
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.9e-174 616.3 457 64.3
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 2.5e-174 615.9 443 65.2
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 4.3e-174 615.1 425 65.9
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 2.8e-173 612.5 431 66.8
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.6e-173 612.1 444 65.8
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 4.7e-173 611.7 460 63.0
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 8.1e-173 610.9 463 64.6
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.8e-172 609.8 428 65.4
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 6.8e-172 607.8 425 64.9
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 8.9e-172 607.4 430 64.4
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 8.9e-172 607.4 444 62.6
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.2e-171 607.1 424 66.7
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 1.2e-171 607.1 455 62.9
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 4.4e-171 605.1 397 70.3
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 7.6e-171 604.4 425 64.9
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 7.6e-171 604.4 425 64.9
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.3e-170 603.6 455 62.6
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 6.4e-170 601.3 430 65.6
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 2.4e-169 599.4 425 64.7
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 3.9e-167 592.0 466 61.2
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 9.6e-166 587.4 445 63.4
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 2.8e-165 585.9 424 65.1
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 5.2e-164 581.6 458 62.7
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.0e-163 579.7 444 61.5
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 9.9e-163 577.4 427 64.4
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 1.3e-162 577.0 432 65.0
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 1.7e-162 576.6 424 63.0
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 3.2e-161 572.4 435 62.1
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 2.1e-160 569.7 431 62.4
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 6.0e-160 568.2 439 61.7
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.0e-160 568.2 460 60.0
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 7.8e-160 567.8 435 61.4
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 7.8e-160 567.8 416 63.5
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 3.9e-159 565.5 425 63.5
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.1e-158 563.9 468 59.6
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.4e-153 545.0 431 61.7
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.9e-150 536.6 425 60.0
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 1.4e-148 530.4 460 57.8
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 4.0e-148 528.9 436 60.6
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 4.6e-144 515.4 406 61.1
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 9.6e-142 507.7 418 57.9
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 8.1e-141 504.6 405 58.5
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 9.0e-140 501.1 402 61.2
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 2.6e-139 499.6 333 71.8
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 4.9e-138 495.4 414 56.8
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.9e-137 493.4 332 68.4
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.6e-136 488.8 433 57.3
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 2.3e-135 486.5 338 66.6
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 1.5e-134 483.8 356 66.6
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 4.8e-133 478.8 414 55.8
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 2.0e-131 473.4 353 65.2
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.8e-131 471.9 415 57.3
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.6e-128 463.8 337 64.4
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.5e-128 462.6 402 58.2
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.1e-126 457.6 337 64.1
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 3.0e-111 406.4 417 47.7
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 6.3e-101 372.1 226 74.3
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 3.4e-94 349.7 245 65.3
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 2.3e-82 310.5 240 63.3
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 2.3e-71 273.9 197 65.0
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 6.8e-71 272.3 248 56.0
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 5.1e-58 229.6 379 36.1
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.9e-53 213.8 130 74.6
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.9e-53 213.8 130 74.6
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 1.4e-47 194.9 164 56.1
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 2.1e-43 181.0 387 33.1
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.4e-39 168.3 161 54.0
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 2.1e-32 144.4 132 51.5
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.9e-29 133.3 174 45.4
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.9e-29 133.3 174 45.4
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 2.3e-26 124.4 77 76.6
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 2.1e-24 117.9 111 50.5
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 2.2e-21 107.8 63 74.6
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 1.0e-18 99.0 76 63.2
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.3e-16 92.0 220 29.5
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 6.9e-15 86.3 227 30.0
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 2.2e-13 81.3 202 29.2
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 7.2e-12 76.3 560 19.8
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 2.3e-10 71.2 75 45.3


User provided reference genes

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