Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 8.9e-204 713.4 359 100.0
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 4.3e-190 667.9 356 93.8
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 1.5e-163 579.7 396 77.5
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 3.3e-158 562.0 365 79.5
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.8e-111 406.8 365 60.5
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.0e-110 403.3 365 61.9
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 3.4e-110 402.5 363 60.9
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.7e-109 400.2 360 60.3
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 7.0e-108 394.8 364 60.4
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 2.0e-107 393.3 363 58.4
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 5.9e-107 391.7 366 57.9
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 6.6e-106 388.3 368 59.5
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 1.9e-105 386.7 368 57.9
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 5.5e-105 385.2 360 58.6
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 5.5e-105 385.2 362 58.8
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 2.1e-104 383.3 365 57.8
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 4.7e-104 382.1 363 57.6
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.3e-103 379.8 367 58.6
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 4.0e-103 379.0 364 59.6
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 8.9e-103 377.9 322 61.5
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 2.0e-102 376.7 371 58.0
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.6e-102 376.3 305 64.9
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 4.4e-102 375.6 271 70.1
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 9.8e-102 374.4 411 53.8
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.7e-101 373.6 271 70.8
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 2.8e-101 372.9 357 59.7
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 4.9e-101 372.1 364 58.2
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 8.3e-101 371.3 345 57.7
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 8.3e-101 371.3 363 58.4
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 1.1e-100 370.9 266 72.6
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 5.4e-100 368.6 305 63.3
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 7.0e-100 368.2 284 66.5
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 7.0e-100 368.2 282 67.7
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 9.2e-100 367.9 284 66.2
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 1.9e-97 360.1 340 56.8
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 4.3e-97 359.0 311 62.4
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 3.6e-96 355.9 291 65.3
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 3.6e-96 355.9 329 59.9
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 3.6e-96 355.9 283 64.7
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 6.1e-96 355.1 267 66.7
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 8.0e-96 354.8 256 68.8
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 1.8e-95 353.6 317 60.6
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 4.0e-95 352.4 352 57.1
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 6.8e-95 351.7 299 62.2
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 8.9e-95 351.3 256 68.0
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 1.2e-94 350.9 292 63.4
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 1.5e-94 350.5 292 62.3
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 2.0e-94 350.1 317 59.9
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 2.6e-94 349.7 317 59.9
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 5.8e-94 348.6 361 53.5
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 9.8e-94 347.8 317 59.9
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 1.7e-93 347.1 364 55.2
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 1.7e-93 347.1 330 57.9
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 2.2e-93 346.7 291 63.9
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 6.4e-93 345.1 279 64.2
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.4e-92 344.0 346 54.6
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.9e-92 343.6 338 56.8
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 4.1e-92 342.4 323 58.2
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 9.2e-92 341.3 346 54.3
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 6.0e-91 338.6 276 62.3
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 6.0e-91 338.6 354 54.5
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 7.8e-91 338.2 357 55.5
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 7.8e-91 338.2 357 55.5
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.3e-90 337.4 310 58.1
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 1.3e-90 337.4 362 53.3
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 5.0e-90 335.5 346 53.8
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 8.6e-90 334.7 366 53.8
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 8.6e-90 334.7 393 50.9
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.5e-89 334.0 361 52.6
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 1.5e-89 334.0 237 71.3
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.5e-89 334.0 354 54.0
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.9e-89 333.6 358 55.3
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 2.5e-89 333.2 259 66.4
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 2.5e-89 333.2 354 54.0
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 4.3e-89 332.4 264 66.3
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 1.6e-88 330.5 310 58.1
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 2.8e-88 329.7 324 56.2
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 1.4e-87 327.4 276 61.6
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 3.1e-87 326.2 293 58.4
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 3.1e-87 326.2 258 65.5
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 3.1e-87 326.2 256 65.6
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 4.0e-87 325.9 342 54.4
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 6.8e-87 325.1 233 67.8
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 2.0e-86 323.6 256 66.8
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 2.6e-86 323.2 231 68.8
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 2.6e-86 323.2 341 53.4
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 2.6e-86 323.2 226 70.8
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 7.5e-86 321.6 211 74.9
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.7e-85 320.5 293 58.0
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 3.7e-85 319.3 335 52.5
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 8.3e-85 318.2 255 63.9
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 1.1e-84 317.8 265 63.8
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 1.9e-84 317.0 235 68.1
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 3.2e-84 316.2 262 63.4
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 7.0e-84 315.1 258 63.6
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 2.1e-83 313.5 357 51.0
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 3.5e-83 312.8 354 51.1
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 8.6e-82 308.1 258 62.8
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.5e-81 307.4 211 72.0
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 6.2e-80 302.0 238 65.1
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 1.1e-79 301.2 305 55.7
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 4.0e-79 299.3 191 76.4
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 9.9e-78 294.7 193 75.6
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 4.3e-73 279.3 229 65.1
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 2.1e-72 276.9 188 73.9
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 4.0e-71 272.7 272 54.0
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 2.1e-67 260.4 270 51.5
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 1.7e-66 257.3 295 49.8
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 1.1e-63 248.1 289 47.1
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 4.0e-63 246.1 153 80.4
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 2.6e-62 243.4 211 55.5
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 1.7e-53 214.2 121 82.6
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 1.9e-52 210.7 229 47.2
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 2.1e-51 207.2 169 57.4
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 8.7e-50 201.8 262 44.7
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 1.9e-49 200.7 103 91.3
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 5.6e-49 199.1 285 42.8
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 2.0e-46 190.7 254 43.3
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 9.0e-31 138.7 69 91.3
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 2.6e-30 137.1 79 78.5
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 6.9e-23 112.5 168 44.0
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 7.7e-14 82.4 61 63.9
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 5.7e-09 66.2 138 29.7
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 1.1e-07 62.0 43 65.1
HPP92_022533 Vanilla planifolia HOM05D004721 ORTHO05D005765 7.7e-06 55.8 101 34.7


User provided reference genes

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